RNA–Protein interactions for RNA: ENST00000428492.5

THRB-208, Transcript of thyroid hormone receptor beta, humanhuman

TSL 4

Gene THRB, Length 539 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THRB-208ENST00000428492 NISCHQ9Y2I1 1504 aa24.97■■□□□ 1.59
THRB-208ENST00000428492 CCDC180Q9P1Z9 1646 aa21.92■■□□□ 1.1
THRB-208ENST00000428492 ZCCHC6Q5VYS8 1495 aaKnown RBP20.94■□□□□ 0.94
THRB-208ENST00000428492 ABCC9O60706 1549 aa20.78■□□□□ 0.92
THRB-208ENST00000428492 DCAF1Q9Y4B6 1507 aa20.73■□□□□ 0.91
THRB-208ENST00000428492 DCAF8L2P0C7V8 631 aa20.59■□□□□ 0.89
THRB-208ENST00000428492 MYO15BQ96JP2 1530 aa20.58■□□□□ 0.88
THRB-208ENST00000428492 NACADO15069 1562 aa20.47■□□□□ 0.87
THRB-208ENST00000428492 RB1CC1Q8TDY2 1594 aa20.33■□□□□ 0.84
THRB-208ENST00000428492 SHROOM4Q9ULL8 1493 aa20.1■□□□□ 0.81
THRB-208ENST00000428492 SCRIBQ14160 1630 aa20.02■□□□□ 0.8
THRB-208ENST00000428492 UNC13AQ9UPW8 1703 aa19.82■□□□□ 0.76
THRB-208ENST00000428492 BICRAQ9NZM4 1560 aa19.64■□□□□ 0.73
THRB-208ENST00000428492 PABPN1Q86U42 306 aaKnown RBP eCLIP19.53■□□□□ 0.72
THRB-208ENST00000428492 CECR2Q9BXF3 1484 aa19.35■□□□□ 0.69
THRB-208ENST00000428492 BAZ1AQ9NRL2 1556 aaPredicted RBP19.33■□□□□ 0.69
THRB-208ENST00000428492 SUPT5HO00267 1087 aaKnown RBP19.28■□□□□ 0.68
THRB-208ENST00000428492 RSF1Q96T23 1441 aaPredicted RBP19.27■□□□□ 0.68
THRB-208ENST00000428492 MROH2BQ7Z745 1585 aa19.23■□□□□ 0.67
THRB-208ENST00000428492 SMARCA4P51532 1647 aa19.23■□□□□ 0.67
THRB-208ENST00000428492 EIF4G1Q04637 1599 aaKnown RBP19.08■□□□□ 0.65
THRB-208ENST00000428492 WIZO95785 1651 aa19.05■□□□□ 0.64
THRB-208ENST00000428492 PEG3Q9GZU2 1588 aa19.04■□□□□ 0.64
THRB-208ENST00000428492 SMARCA2P51531 1590 aa19■□□□□ 0.63
THRB-208ENST00000428492 ATAD2BQ9ULI0 1458 aa18.97■□□□□ 0.63
THRB-208ENST00000428492 TOP2AP11388 1531 aaKnown RBP18.92■□□□□ 0.62
THRB-208ENST00000428492 NCAPD3P42695 1498 aa18.87■□□□□ 0.61
THRB-208ENST00000428492 BAZ1BQ9UIG0 1483 aaKnown RBP18.85■□□□□ 0.61
THRB-208ENST00000428492 CC2D2AQ9P2K1 1620 aa18.84■□□□□ 0.61
THRB-208ENST00000428492 HMGXB3Q12766 1538 aa18.84■□□□□ 0.61
THRB-208ENST00000428492 CCDC88BA6NC98 1476 aa18.69■□□□□ 0.58
THRB-208ENST00000428492 DNAJC5BQ9UF47 199 aa18.45■□□□□ 0.54
THRB-208ENST00000428492 CHIC1Q5VXU3 224 aa18.39■□□□□ 0.53
THRB-208ENST00000428492 CFTRP13569 1480 aa18.38■□□□□ 0.53
THRB-208ENST00000428492 CADPSQ9ULU8 1353 aa18.36■□□□□ 0.53
THRB-208ENST00000428492 PRDM2Q13029 1718 aa18.3■□□□□ 0.52
THRB-208ENST00000428492 LAMC3Q9Y6N6 1575 aa18.27■□□□□ 0.52
THRB-208ENST00000428492 TRIM41Q8WV44 630 aa18.21■□□□□ 0.51
THRB-208ENST00000428492 ABCC8Q09428 1581 aa18.17■□□□□ 0.5
THRB-208ENST00000428492 NESP48681 1621 aa18.16■□□□□ 0.5
THRB-208ENST00000428492 WRNQ14191 1432 aaPredicted RBP eCLIP18.16■□□□□ 0.5
THRB-208ENST00000428492 PDS5BQ9NTI5 1447 aa18.15■□□□□ 0.5
THRB-208ENST00000428492 FANCD2Q9BXW9 1451 aa18.14■□□□□ 0.49
THRB-208ENST00000428492 CEP164Q9UPV0 1460 aa18.06■□□□□ 0.48
THRB-208ENST00000428492 SYNJ1O43426 1573 aa18.05■□□□□ 0.48
THRB-208ENST00000428492 TOP2BQ02880 1626 aa18.05■□□□□ 0.48
THRB-208ENST00000428492 BIVM-ERCC5R4GMW8 1640 aa18.04■□□□□ 0.48
THRB-208ENST00000428492 CUX1P39880 1505 aa18.01■□□□□ 0.47
THRB-208ENST00000428492 KIF21AQ7Z4S6 1674 aa17.97■□□□□ 0.47
THRB-208ENST00000428492 DNMBPQ6XZF7 1577 aa17.96■□□□□ 0.46
THRB-208ENST00000428492 TOPBP1Q92547 1522 aa17.92■□□□□ 0.46
THRB-208ENST00000428492 ERCC6Q03468 1493 aa17.89■□□□□ 0.45
THRB-208ENST00000428492 MRC2Q9UBG0 1479 aa17.89■□□□□ 0.45
THRB-208ENST00000428492 URB2Q14146 1524 aaKnown RBP17.89■□□□□ 0.45
THRB-208ENST00000428492 EEA1Q15075 1411 aa17.89■□□□□ 0.45
THRB-208ENST00000428492 FGD5Q6ZNL6 1462 aa17.85■□□□□ 0.45
THRB-208ENST00000428492 POLA1P09884 1462 aaPredicted RBP17.81■□□□□ 0.44
THRB-208ENST00000428492 SOGA1O94964 1423 aa17.81■□□□□ 0.44
THRB-208ENST00000428492 WDR62O43379 1518 aa17.8■□□□□ 0.44
THRB-208ENST00000428492 FAM9AQ8IZU1 332 aaPredicted RBP17.77■□□□□ 0.44
THRB-208ENST00000428492 THOC2Q8NI27 1593 aaKnown RBP17.76■□□□□ 0.43
THRB-208ENST00000428492 KIF27Q86VH2 1401 aa17.76■□□□□ 0.43
THRB-208ENST00000428492 ABCA10Q8WWZ4 1543 aa17.73■□□□□ 0.43
THRB-208ENST00000428492 CSRNP3Q8WYN3 585 aa17.73■□□□□ 0.43
THRB-208ENST00000428492 RUSC2Q8N2Y8 1516 aa17.72■□□□□ 0.43
THRB-208ENST00000428492 CUX2O14529 1486 aa17.71■□□□□ 0.43
THRB-208ENST00000428492 RAD54L2Q9Y4B4 1467 aa17.7■□□□□ 0.42
THRB-208ENST00000428492 WDR97A6NE52 1622 aa17.66■□□□□ 0.42
THRB-208ENST00000428492 IFT140Q96RY7 1462 aa17.66■□□□□ 0.42
THRB-208ENST00000428492 TARBP1Q13395 1621 aaKnown RBP17.65■□□□□ 0.42
THRB-208ENST00000428492 LOC105371045A0A1W2PR82 267 aa17.61■□□□□ 0.41
THRB-208ENST00000428492 KIF21BO75037 1637 aa17.61■□□□□ 0.41
THRB-208ENST00000428492 ABCA5Q8WWZ7 1642 aa17.58■□□□□ 0.41
THRB-208ENST00000428492 IGF1RP08069 1367 aa17.58■□□□□ 0.4
THRB-208ENST00000428492 GOLGA3Q08378 1498 aa17.56■□□□□ 0.4
THRB-208ENST00000428492 GAPVD1Q14C86 1478 aa17.56■□□□□ 0.4
THRB-208ENST00000428492 PRXQ9BXM0 1461 aa17.56■□□□□ 0.4
THRB-208ENST00000428492 TDRD9Q8NDG6 1382 aaKnown RBP17.55■□□□□ 0.4
THRB-208ENST00000428492 ERICH3Q5RHP9 1530 aa17.54■□□□□ 0.4
THRB-208ENST00000428492 CUL7Q14999 1698 aa17.51■□□□□ 0.39
THRB-208ENST00000428492 CARMIL1Q5VZK9 1371 aa17.51■□□□□ 0.39
THRB-208ENST00000428492 GRIN2BQ13224 1484 aa17.49■□□□□ 0.39
THRB-208ENST00000428492 TNIKQ9UKE5 1360 aa17.48■□□□□ 0.39
THRB-208ENST00000428492 RAPGEF2Q9Y4G8 1499 aa17.48■□□□□ 0.39
THRB-208ENST00000428492 ZNF608Q9ULD9 1512 aaPredicted RBP17.47■□□□□ 0.39
THRB-208ENST00000428492 AQRO60306 1485 aaKnown RBP eCLIP17.47■□□□□ 0.39
THRB-208ENST00000428492 PBRM1Q86U86 1689 aa17.46■□□□□ 0.39
THRB-208ENST00000428492 UBTFP17480 764 aaKnown RBP17.46■□□□□ 0.39
THRB-208ENST00000428492 EHMT2Q96KQ7 1210 aa17.45■□□□□ 0.38
THRB-208ENST00000428492 EIF4G3O43432 1585 aaKnown RBP17.45■□□□□ 0.38
THRB-208ENST00000428492 FHAD1B1AJZ9 1412 aa17.4■□□□□ 0.38
THRB-208ENST00000428492 MAGI1Q96QZ7 1491 aaPredicted RBP17.37■□□□□ 0.37
THRB-208ENST00000428492 ADAMTS12P58397 1594 aa17.37■□□□□ 0.37
THRB-208ENST00000428492 SNAPC4Q5SXM2 1469 aa17.34■□□□□ 0.37
THRB-208ENST00000428492 CEP162Q5TB80 1403 aa17.33■□□□□ 0.36
THRB-208ENST00000428492 SYNJ2O15056 1496 aa17.28■□□□□ 0.36
THRB-208ENST00000428492 CLIP1P30622 1438 aa17.26■□□□□ 0.35
THRB-208ENST00000428492 CTTNBP2Q8WZ74 1663 aa17.25■□□□□ 0.35
THRB-208ENST00000428492 GRIN2AQ12879 1464 aa17.24■□□□□ 0.35
THRB-208ENST00000428492 CHMP7Q8WUX9 453 aaPredicted RBP17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms