RNA–Protein interactions for RNA: ENST00000416420.5

THRB-206, Transcript of thyroid hormone receptor beta, humanhuman

APPRIS P2 TSL 2 BASIC

Gene THRB, Length 2,571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THRB-206ENST00000416420 NISCHQ9Y2I1 1504 aa23.69■■□□□ 1.38
THRB-206ENST00000416420 CCDC180Q9P1Z9 1646 aa20.2■□□□□ 0.82
THRB-206ENST00000416420 SHROOM4Q9ULL8 1493 aa20.19■□□□□ 0.82
THRB-206ENST00000416420 ZCCHC6Q5VYS8 1495 aaKnown RBP20.05■□□□□ 0.8
THRB-206ENST00000416420 SUPT5HO00267 1087 aaKnown RBP19.73■□□□□ 0.75
THRB-206ENST00000416420 DCAF8L2P0C7V8 631 aa19.57■□□□□ 0.72
THRB-206ENST00000416420 DCAF1Q9Y4B6 1507 aa19.41■□□□□ 0.7
THRB-206ENST00000416420 MYO15BQ96JP2 1530 aa19.23■□□□□ 0.67
THRB-206ENST00000416420 CHIC1Q5VXU3 224 aa19.18■□□□□ 0.66
THRB-206ENST00000416420 HRCP23327 699 aa19.08■□□□□ 0.64
THRB-206ENST00000416420 SCRIBQ14160 1630 aa18.95■□□□□ 0.62
THRB-206ENST00000416420 ABCC9O60706 1549 aa18.94■□□□□ 0.62
THRB-206ENST00000416420 RSF1Q96T23 1441 aaPredicted RBP18.73■□□□□ 0.59
THRB-206ENST00000416420 PCGF6Q9BYE7 350 aa18.68■□□□□ 0.58
THRB-206ENST00000416420 LOC105371045A0A1W2PR82 267 aa18.64■□□□□ 0.57
THRB-206ENST00000416420 NACADO15069 1562 aa18.62■□□□□ 0.57
THRB-206ENST00000416420 RB1CC1Q8TDY2 1594 aa18.62■□□□□ 0.57
THRB-206ENST00000416420 PPARGC1BQ86YN6 1023 aaKnown RBP18.52■□□□□ 0.56
THRB-206ENST00000416420 CECR2Q9BXF3 1484 aa18.52■□□□□ 0.56
THRB-206ENST00000416420 MROH2BQ7Z745 1585 aa18.46■□□□□ 0.55
THRB-206ENST00000416420 WIZO95785 1651 aa18.41■□□□□ 0.54
THRB-206ENST00000416420 PELP1Q8IZL8 1130 aaKnown RBP18.37■□□□□ 0.53
THRB-206ENST00000416420 TRIM41Q8WV44 630 aa18.34■□□□□ 0.53
THRB-206ENST00000416420 UNC13AQ9UPW8 1703 aa18.27■□□□□ 0.51
THRB-206ENST00000416420 BAZ1AQ9NRL2 1556 aaPredicted RBP18.24■□□□□ 0.51
THRB-206ENST00000416420 FAM9AQ8IZU1 332 aaPredicted RBP18.24■□□□□ 0.51
THRB-206ENST00000416420 TRIM26Q12899 539 aaPredicted RBP18.22■□□□□ 0.51
THRB-206ENST00000416420 EIF4G1Q04637 1599 aaKnown RBP18.16■□□□□ 0.5
THRB-206ENST00000416420 EHMT2Q96KQ7 1210 aa18.12■□□□□ 0.49
THRB-206ENST00000416420 ZEB1P37275 1124 aaPredicted RBP18.12■□□□□ 0.49
THRB-206ENST00000416420 SMARCA4P51532 1647 aa18.09■□□□□ 0.49
THRB-206ENST00000416420 TOP2AP11388 1531 aaKnown RBP18.04■□□□□ 0.48
THRB-206ENST00000416420 SMARCA2P51531 1590 aa17.98■□□□□ 0.47
THRB-206ENST00000416420 ABCC8Q09428 1581 aa17.97■□□□□ 0.47
THRB-206ENST00000416420 CCDC88BA6NC98 1476 aa17.96■□□□□ 0.47
THRB-206ENST00000416420 BICRAQ9NZM4 1560 aa17.93■□□□□ 0.46
THRB-206ENST00000416420 SCAF1Q9H7N4 1312 aaKnown RBP17.9■□□□□ 0.46
THRB-206ENST00000416420 PABPN1Q86U42 306 aaKnown RBP eCLIP17.86■□□□□ 0.45
THRB-206ENST00000416420 SOGA1O94964 1423 aa17.74■□□□□ 0.43
THRB-206ENST00000416420 PEG3Q9GZU2 1588 aa17.72■□□□□ 0.43
THRB-206ENST00000416420 RUSC2Q8N2Y8 1516 aa17.7■□□□□ 0.42
THRB-206ENST00000416420 MYT1Q01538 1121 aa17.68■□□□□ 0.42
THRB-206ENST00000416420 CEP162Q5TB80 1403 aa17.61■□□□□ 0.41
THRB-206ENST00000416420 SYNJ1O43426 1573 aa17.58■□□□□ 0.41
THRB-206ENST00000416420 ATAD2BQ9ULI0 1458 aa17.58■□□□□ 0.41
THRB-206ENST00000416420 ACIN1Q9UKV3 1341 aaKnown RBP17.58■□□□□ 0.4
THRB-206ENST00000416420 WRNQ14191 1432 aaPredicted RBP eCLIP17.57■□□□□ 0.4
THRB-206ENST00000416420 TNIKQ9UKE5 1360 aa17.55■□□□□ 0.4
THRB-206ENST00000416420 CSRNP3Q8WYN3 585 aa17.54■□□□□ 0.4
THRB-206ENST00000416420 EEA1Q15075 1411 aa17.53■□□□□ 0.4
THRB-206ENST00000416420 TTBK1Q5TCY1 1321 aaPredicted RBP17.52■□□□□ 0.4
THRB-206ENST00000416420 BAZ1BQ9UIG0 1483 aaKnown RBP17.52■□□□□ 0.4
THRB-206ENST00000416420 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.5■□□□□ 0.39
THRB-206ENST00000416420 GOLGA3Q08378 1498 aa17.47■□□□□ 0.39
THRB-206ENST00000416420 NEUROD1Q13562 356 aa17.47■□□□□ 0.39
THRB-206ENST00000416420 UBTFP17480 764 aaKnown RBP17.46■□□□□ 0.39
THRB-206ENST00000416420 CENPBP07199 599 aaPredicted RBP17.45■□□□□ 0.38
THRB-206ENST00000416420 KIF21BO75037 1637 aa17.41■□□□□ 0.38
THRB-206ENST00000416420 GTF3C3Q9Y5Q9 886 aa17.39■□□□□ 0.37
THRB-206ENST00000416420 CCER1Q8TC90 406 aaPredicted RBP17.38■□□□□ 0.37
THRB-206ENST00000416420 CEP164Q9UPV0 1460 aa17.37■□□□□ 0.37
THRB-206ENST00000416420 DIEXFQ68CQ4 756 aaKnown RBP17.35■□□□□ 0.37
THRB-206ENST00000416420 TOP2BQ02880 1626 aa17.33■□□□□ 0.37
THRB-206ENST00000416420 RAPGEF2Q9Y4G8 1499 aa17.31■□□□□ 0.36
THRB-206ENST00000416420 BIVM-ERCC5R4GMW8 1640 aa17.3■□□□□ 0.36
THRB-206ENST00000416420 CLIP1P30622 1438 aa17.27■□□□□ 0.36
THRB-206ENST00000416420 HMGXB3Q12766 1538 aa17.24■□□□□ 0.35
THRB-206ENST00000416420 NCAPD3P42695 1498 aa17.21■□□□□ 0.35
THRB-206ENST00000416420 VPS8Q8N3P4 1428 aa17.19■□□□□ 0.34
THRB-206ENST00000416420 RANGAP1P46060 587 aaPredicted RBP17.19■□□□□ 0.34
THRB-206ENST00000416420 CUX1P39880 1505 aa17.18■□□□□ 0.34
THRB-206ENST00000416420 PRXQ9BXM0 1461 aa17.11■□□□□ 0.33
THRB-206ENST00000416420 ERICH3Q5RHP9 1530 aa17.11■□□□□ 0.33
THRB-206ENST00000416420 HNRNPUL2Q1KMD3 747 aaKnown RBP17.1■□□□□ 0.33
THRB-206ENST00000416420 PRDM2Q13029 1718 aa17.1■□□□□ 0.33
THRB-206ENST00000416420 CFTRP13569 1480 aa17.09■□□□□ 0.33
THRB-206ENST00000416420 ARAP1Q96P48 1450 aa17.06■□□□□ 0.32
THRB-206ENST00000416420 ZNF316A6NFI3 1004 aaPredicted RBP17.06■□□□□ 0.32
THRB-206ENST00000416420 APLP2Q06481 763 aa17■□□□□ 0.31
THRB-206ENST00000416420 KIF27Q86VH2 1401 aa16.99■□□□□ 0.31
THRB-206ENST00000416420 YTHDC1Q96MU7 727 aaKnown RBP16.95■□□□□ 0.3
THRB-206ENST00000416420 KANK4Q5T7N3 995 aaPredicted RBP16.94■□□□□ 0.3
THRB-206ENST00000416420 ARHGAP35Q9NRY4 1499 aa16.91■□□□□ 0.3
THRB-206ENST00000416420 CC2D2AQ9P2K1 1620 aa16.88■□□□□ 0.29
THRB-206ENST00000416420 CUX2O14529 1486 aa16.88■□□□□ 0.29
THRB-206ENST00000416420 CADPSQ9ULU8 1353 aa16.87■□□□□ 0.29
THRB-206ENST00000416420 MIER1Q8N108 512 aa16.86■□□□□ 0.29
THRB-206ENST00000416420 FGD5Q6ZNL6 1462 aa16.85■□□□□ 0.29
THRB-206ENST00000416420 IGF1RP08069 1367 aa16.84■□□□□ 0.29
THRB-206ENST00000416420 RRBP1Q9P2E9 1410 aaKnown RBP16.8■□□□□ 0.28
THRB-206ENST00000416420 DHX57Q6P158 1386 aaKnown RBP16.79■□□□□ 0.28
THRB-206ENST00000416420 CLSPNQ9HAW4 1339 aa16.78■□□□□ 0.28
THRB-206ENST00000416420 CARMIL1Q5VZK9 1371 aa16.75■□□□□ 0.27
THRB-206ENST00000416420 FANCD2Q9BXW9 1451 aa16.75■□□□□ 0.27
THRB-206ENST00000416420 TIAM1Q13009 1591 aa16.73■□□□□ 0.27
THRB-206ENST00000416420 NESP48681 1621 aa16.71■□□□□ 0.27
THRB-206ENST00000416420 CCNB3Q8WWL7 1395 aa16.7■□□□□ 0.26
THRB-206ENST00000416420 RAD54L2Q9Y4B4 1467 aa16.7■□□□□ 0.26
THRB-206ENST00000416420 DNMBPQ6XZF7 1577 aa16.69■□□□□ 0.26
THRB-206ENST00000416420 PCF11O94913 1555 aaKnown RBP16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms