RNA–Protein interactions for RNA: ENST00000453729.6

THRB-212, Transcript of thyroid hormone receptor beta, humanhuman

TSL 1 (best)

Gene THRB, Length 703 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THRB-212ENST00000453729 NISCHQ9Y2I1 1504 aa41.07■■■■■ 4.16
THRB-212ENST00000453729 CCDC180Q9P1Z9 1646 aa36.48■■■■□ 3.43
THRB-212ENST00000453729 ABCC9O60706 1549 aa35.38■■■■□ 3.25
THRB-212ENST00000453729 NACADO15069 1562 aa34.29■■■■□ 3.08
THRB-212ENST00000453729 RB1CC1Q8TDY2 1594 aa34.27■■■■□ 3.08
THRB-212ENST00000453729 ZCCHC6Q5VYS8 1495 aaKnown RBP34.22■■■■□ 3.07
THRB-212ENST00000453729 DCAF8L2P0C7V8 631 aa34.22■■■■□ 3.07
THRB-212ENST00000453729 MYO15BQ96JP2 1530 aa34.21■■■■□ 3.07
THRB-212ENST00000453729 DCAF1Q9Y4B6 1507 aa34.09■■■■□ 3.05
THRB-212ENST00000453729 UNC13AQ9UPW8 1703 aa33.33■■■□□ 2.93
THRB-212ENST00000453729 SCRIBQ14160 1630 aa33.14■■■□□ 2.9
THRB-212ENST00000453729 PABPN1Q86U42 306 aaKnown RBP eCLIP33.08■■■□□ 2.89
THRB-212ENST00000453729 BICRAQ9NZM4 1560 aa33.07■■■□□ 2.88
THRB-212ENST00000453729 SHROOM4Q9ULL8 1493 aa32.99■■■□□ 2.87
THRB-212ENST00000453729 DNAJC5BQ9UF47 199 aa32.25■■■□□ 2.75
THRB-212ENST00000453729 EIF4G1Q04637 1599 aaKnown RBP32.24■■■□□ 2.75
THRB-212ENST00000453729 CC2D2AQ9P2K1 1620 aa32.04■■■□□ 2.72
THRB-212ENST00000453729 BAZ1AQ9NRL2 1556 aaPredicted RBP31.87■■■□□ 2.69
THRB-212ENST00000453729 CECR2Q9BXF3 1484 aa31.86■■■□□ 2.69
THRB-212ENST00000453729 SMARCA4P51532 1647 aa31.79■■■□□ 2.68
THRB-212ENST00000453729 SMARCA2P51531 1590 aa31.65■■■□□ 2.66
THRB-212ENST00000453729 NCAPD3P42695 1498 aa31.62■■■□□ 2.65
THRB-212ENST00000453729 ATAD2BQ9ULI0 1458 aa31.6■■■□□ 2.65
THRB-212ENST00000453729 MROH2BQ7Z745 1585 aa31.57■■■□□ 2.64
THRB-212ENST00000453729 PEG3Q9GZU2 1588 aa31.55■■■□□ 2.64
THRB-212ENST00000453729 HMGXB3Q12766 1538 aa31.47■■■□□ 2.63
THRB-212ENST00000453729 BAZ1BQ9UIG0 1483 aaKnown RBP31.37■■■□□ 2.61
THRB-212ENST00000453729 RSF1Q96T23 1441 aaPredicted RBP31.32■■■□□ 2.61
THRB-212ENST00000453729 WIZO95785 1651 aa31.22■■■□□ 2.59
THRB-212ENST00000453729 TOP2AP11388 1531 aaKnown RBP30.99■■■□□ 2.55
THRB-212ENST00000453729 LAMC3Q9Y6N6 1575 aa30.76■■■□□ 2.52
THRB-212ENST00000453729 CADPSQ9ULU8 1353 aa30.71■■■□□ 2.51
THRB-212ENST00000453729 SUPT5HO00267 1087 aaKnown RBP30.66■■■□□ 2.5
THRB-212ENST00000453729 NESP48681 1621 aa30.62■■■□□ 2.49
THRB-212ENST00000453729 CCDC88BA6NC98 1476 aa30.6■■■□□ 2.49
THRB-212ENST00000453729 PDS5BQ9NTI5 1447 aa30.6■■■□□ 2.49
THRB-212ENST00000453729 ERCC6Q03468 1493 aa30.58■■■□□ 2.49
THRB-212ENST00000453729 CFTRP13569 1480 aa30.54■■■□□ 2.48
THRB-212ENST00000453729 PRDM2Q13029 1718 aa30.31■■■□□ 2.44
THRB-212ENST00000453729 FANCD2Q9BXW9 1451 aa30.31■■■□□ 2.44
THRB-212ENST00000453729 KIF21AQ7Z4S6 1674 aa30.3■■■□□ 2.44
THRB-212ENST00000453729 CEP164Q9UPV0 1460 aa30.27■■■□□ 2.44
THRB-212ENST00000453729 CUX2O14529 1486 aa30.25■■■□□ 2.43
THRB-212ENST00000453729 MRC2Q9UBG0 1479 aa30.19■■■□□ 2.42
THRB-212ENST00000453729 THOC2Q8NI27 1593 aaKnown RBP30.17■■■□□ 2.42
THRB-212ENST00000453729 WDR62O43379 1518 aa30.05■■■□□ 2.4
THRB-212ENST00000453729 ABCC8Q09428 1581 aa30.02■■■□□ 2.4
THRB-212ENST00000453729 URB2Q14146 1524 aaKnown RBP29.92■■■□□ 2.38
THRB-212ENST00000453729 DNMBPQ6XZF7 1577 aa29.83■■■□□ 2.37
THRB-212ENST00000453729 TOPBP1Q92547 1522 aa29.82■■■□□ 2.36
THRB-212ENST00000453729 IFT140Q96RY7 1462 aa29.67■■■□□ 2.34
THRB-212ENST00000453729 CUX1P39880 1505 aa29.61■■■□□ 2.33
THRB-212ENST00000453729 WRNQ14191 1432 aaPredicted RBP eCLIP29.58■■■□□ 2.33
THRB-212ENST00000453729 POLA1P09884 1462 aaPredicted RBP29.57■■■□□ 2.32
THRB-212ENST00000453729 SOGA1O94964 1423 aa29.52■■■□□ 2.32
THRB-212ENST00000453729 FGD5Q6ZNL6 1462 aa29.51■■■□□ 2.31
THRB-212ENST00000453729 TOP2BQ02880 1626 aa29.48■■■□□ 2.31
THRB-212ENST00000453729 BIVM-ERCC5R4GMW8 1640 aa29.46■■■□□ 2.31
THRB-212ENST00000453729 TARBP1Q13395 1621 aaKnown RBP29.45■■■□□ 2.31
THRB-212ENST00000453729 WDR97A6NE52 1622 aa29.41■■■□□ 2.3
THRB-212ENST00000453729 RAD54L2Q9Y4B4 1467 aa29.38■■■□□ 2.29
THRB-212ENST00000453729 SYNJ1O43426 1573 aa29.37■■■□□ 2.29
THRB-212ENST00000453729 ZNF608Q9ULD9 1512 aaPredicted RBP29.35■■■□□ 2.29
THRB-212ENST00000453729 ABCA10Q8WWZ4 1543 aa29.31■■■□□ 2.28
THRB-212ENST00000453729 EIF4G3O43432 1585 aaKnown RBP29.28■■■□□ 2.28
THRB-212ENST00000453729 AQRO60306 1485 aaKnown RBP eCLIP29.26■■■□□ 2.27
THRB-212ENST00000453729 TDRD9Q8NDG6 1382 aaKnown RBP29.26■■■□□ 2.27
THRB-212ENST00000453729 GRIN2BQ13224 1484 aa29.17■■■□□ 2.26
THRB-212ENST00000453729 GAPVD1Q14C86 1478 aa29.17■■■□□ 2.26
THRB-212ENST00000453729 ABCA5Q8WWZ7 1642 aa29.1■■■□□ 2.25
THRB-212ENST00000453729 DNAJC5Q9H3Z4 198 aa29.09■■■□□ 2.25
THRB-212ENST00000453729 MAGI1Q96QZ7 1491 aaPredicted RBP29.09■■■□□ 2.25
THRB-212ENST00000453729 OSCARQ8IYS5 282 aa29.07■■■□□ 2.24
THRB-212ENST00000453729 TRIM41Q8WV44 630 aa29.05■■■□□ 2.24
THRB-212ENST00000453729 PBRM1Q86U86 1689 aa29.02■■■□□ 2.24
THRB-212ENST00000453729 SNAPC4Q5SXM2 1469 aa29■■■□□ 2.23
THRB-212ENST00000453729 KIF27Q86VH2 1401 aa29■■■□□ 2.23
THRB-212ENST00000453729 ERICH3Q5RHP9 1530 aa28.99■■■□□ 2.23
THRB-212ENST00000453729 CHMP7Q8WUX9 453 aaPredicted RBP28.96■■■□□ 2.23
THRB-212ENST00000453729 SYNJ2O15056 1496 aa28.94■■■□□ 2.22
THRB-212ENST00000453729 FBLN2P98095 1184 aa28.94■■■□□ 2.22
THRB-212ENST00000453729 FHAD1B1AJZ9 1412 aa28.87■■■□□ 2.21
THRB-212ENST00000453729 CHD1O14646 1710 aa28.87■■■□□ 2.21
THRB-212ENST00000453729 ADAMTS12P58397 1594 aa28.81■■■□□ 2.2
THRB-212ENST00000453729 IGF1RP08069 1367 aa28.81■■■□□ 2.2
THRB-212ENST00000453729 CUL7Q14999 1698 aa28.75■■■□□ 2.19
THRB-212ENST00000453729 CHIC1Q5VXU3 224 aa28.75■■■□□ 2.19
THRB-212ENST00000453729 GRIN2AQ12879 1464 aa28.74■■■□□ 2.19
THRB-212ENST00000453729 CARMIL1Q5VZK9 1371 aa28.67■■■□□ 2.18
THRB-212ENST00000453729 EEA1Q15075 1411 aa28.65■■■□□ 2.18
THRB-212ENST00000453729 NUP160Q12769 1436 aa28.62■■■□□ 2.17
THRB-212ENST00000453729 CLASP1Q7Z460 1538 aa28.6■■■□□ 2.17
THRB-212ENST00000453729 RUSC2Q8N2Y8 1516 aa28.59■■■□□ 2.17
THRB-212ENST00000453729 RAPGEF2Q9Y4G8 1499 aa28.53■■■□□ 2.16
THRB-212ENST00000453729 CEP170Q5SW79 1584 aa28.51■■■□□ 2.15
THRB-212ENST00000453729 CSRNP3Q8WYN3 585 aa28.51■■■□□ 2.15
THRB-212ENST00000453729 ARHGEF11O15085 1522 aa28.46■■■□□ 2.15
THRB-212ENST00000453729 KIAA0586Q9BVV6 1533 aa28.44■■■□□ 2.14
THRB-212ENST00000453729 PRXQ9BXM0 1461 aa28.43■■■□□ 2.14
THRB-212ENST00000453729 RIMBP3CA6NJZ7 1639 aa28.42■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms