RNA–Protein interactions for RNA: ENST00000397843.6

ARHGEF12-202, Transcript of Rho guanine nucleotide exchange factor 12, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ARHGEF12, Length 9,660 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF12-202ENST00000397843 NISCHQ9Y2I1 1504 aa8.48□□□□□ -1.05
ARHGEF12-202ENST00000397843 PELP1Q8IZL8 1130 aaKnown RBP7.88□□□□□ -1.15
ARHGEF12-202ENST00000397843 DCAF8L2P0C7V8 631 aa7.69□□□□□ -1.18
ARHGEF12-202ENST00000397843 MYT1Q01538 1121 aa7.66□□□□□ -1.18
ARHGEF12-202ENST00000397843 ZEB1P37275 1124 aaPredicted RBP7.63□□□□□ -1.19
ARHGEF12-202ENST00000397843 FAM9AQ8IZU1 332 aaPredicted RBP7.53□□□□□ -1.2
ARHGEF12-202ENST00000397843 SUPT5HO00267 1087 aaKnown RBP7.53□□□□□ -1.2
ARHGEF12-202ENST00000397843 APLP2Q06481 763 aa7.52□□□□□ -1.21
ARHGEF12-202ENST00000397843 CCDC180Q9P1Z9 1646 aa7.51□□□□□ -1.21
ARHGEF12-202ENST00000397843 CENPBP07199 599 aaPredicted RBP7.45□□□□□ -1.22
ARHGEF12-202ENST00000397843 CCER1Q8TC90 406 aaPredicted RBP7.44□□□□□ -1.22
ARHGEF12-202ENST00000397843 SHROOM4Q9ULL8 1493 aa7.39□□□□□ -1.23
ARHGEF12-202ENST00000397843 HRCP23327 699 aa7.24□□□□□ -1.25
ARHGEF12-202ENST00000397843 TRIM41Q8WV44 630 aa7.24□□□□□ -1.25
ARHGEF12-202ENST00000397843 NEFLP07196 543 aa7.2□□□□□ -1.26
ARHGEF12-202ENST00000397843 YTHDC1Q96MU7 727 aaKnown RBP7.19□□□□□ -1.26
ARHGEF12-202ENST00000397843 TRIM26Q12899 539 aaPredicted RBP7.19□□□□□ -1.26
ARHGEF12-202ENST00000397843 PCGF6Q9BYE7 350 aa7.17□□□□□ -1.26
ARHGEF12-202ENST00000397843 ERICH6Q7L0X2 663 aa7.16□□□□□ -1.26
ARHGEF12-202ENST00000397843 CLSPNQ9HAW4 1339 aa7.15□□□□□ -1.26
ARHGEF12-202ENST00000397843 ZCCHC6Q5VYS8 1495 aaKnown RBP7.12□□□□□ -1.27
ARHGEF12-202ENST00000397843 SCAF1Q9H7N4 1312 aaKnown RBP7.06□□□□□ -1.28
ARHGEF12-202ENST00000397843 DCAF1Q9Y4B6 1507 aa7.06□□□□□ -1.28
ARHGEF12-202ENST00000397843 UBTFP17480 764 aaKnown RBP7.06□□□□□ -1.28
ARHGEF12-202ENST00000397843 ACIN1Q9UKV3 1341 aaKnown RBP7.03□□□□□ -1.28
ARHGEF12-202ENST00000397843 TTBK1Q5TCY1 1321 aaPredicted RBP7.02□□□□□ -1.29
ARHGEF12-202ENST00000397843 NACADO15069 1562 aa6.99□□□□□ -1.29
ARHGEF12-202ENST00000397843 MYO15BQ96JP2 1530 aa6.97□□□□□ -1.29
ARHGEF12-202ENST00000397843 RB1CC1Q8TDY2 1594 aa6.97□□□□□ -1.29
ARHGEF12-202ENST00000397843 DAXXQ9UER7 740 aaPredicted RBP6.96□□□□□ -1.3
ARHGEF12-202ENST00000397843 CHIC1Q5VXU3 224 aa6.96□□□□□ -1.3
ARHGEF12-202ENST00000397843 EEA1Q15075 1411 aa6.95□□□□□ -1.3
ARHGEF12-202ENST00000397843 PPARGC1BQ86YN6 1023 aaKnown RBP6.95□□□□□ -1.3
ARHGEF12-202ENST00000397843 MYT1LQ9UL68 1186 aa6.93□□□□□ -1.3
ARHGEF12-202ENST00000397843 PRKCSHP14314 528 aaPredicted RBP6.92□□□□□ -1.3
ARHGEF12-202ENST00000397843 SCRIBQ14160 1630 aa6.89□□□□□ -1.31
ARHGEF12-202ENST00000397843 ABCC9O60706 1549 aa6.86□□□□□ -1.31
ARHGEF12-202ENST00000397843 RTL5Q5HYW3 569 aaPredicted RBP6.86□□□□□ -1.31
ARHGEF12-202ENST00000397843 EHMT2Q96KQ7 1210 aa6.84□□□□□ -1.31
ARHGEF12-202ENST00000397843 DIEXFQ68CQ4 756 aaKnown RBP6.82□□□□□ -1.32
ARHGEF12-202ENST00000397843 BAZ1AQ9NRL2 1556 aaPredicted RBP6.82□□□□□ -1.32
ARHGEF12-202ENST00000397843 ZNF316A6NFI3 1004 aaPredicted RBP6.79□□□□□ -1.32
ARHGEF12-202ENST00000397843 ATP1B4Q9UN42 357 aaPredicted RBP6.78□□□□□ -1.32
ARHGEF12-202ENST00000397843 GOLGA3Q08378 1498 aa6.75□□□□□ -1.33
ARHGEF12-202ENST00000397843 ANP32CO43423 234 aa6.75□□□□□ -1.33
ARHGEF12-202ENST00000397843 CDK11AQ9UQ88 783 aaPredicted RBP6.74□□□□□ -1.33
ARHGEF12-202ENST00000397843 NEFMP07197 916 aa6.72□□□□□ -1.33
ARHGEF12-202ENST00000397843 BCL11AQ9H165 835 aa6.72□□□□□ -1.33
ARHGEF12-202ENST00000397843 CEP164Q9UPV0 1460 aa6.72□□□□□ -1.33
ARHGEF12-202ENST00000397843 SMARCA2P51531 1590 aa6.71□□□□□ -1.34
ARHGEF12-202ENST00000397843 EIF5BO60841 1220 aaKnown RBP6.71□□□□□ -1.34
ARHGEF12-202ENST00000397843 RANGAP1P46060 587 aaPredicted RBP6.7□□□□□ -1.34
ARHGEF12-202ENST00000397843 RSF1Q96T23 1441 aaPredicted RBP6.7□□□□□ -1.34
ARHGEF12-202ENST00000397843 CSRNP3Q8WYN3 585 aa6.67□□□□□ -1.34
ARHGEF12-202ENST00000397843 ANP32AP39687 249 aaKnown RBP6.67□□□□□ -1.34
ARHGEF12-202ENST00000397843 CLIP1P30622 1438 aa6.67□□□□□ -1.34
ARHGEF12-202ENST00000397843 NEUROD1Q13562 356 aa6.66□□□□□ -1.34
ARHGEF12-202ENST00000397843 BAZ1BQ9UIG0 1483 aaKnown RBP6.66□□□□□ -1.34
ARHGEF12-202ENST00000397843 TONSLQ96HA7 1378 aa6.65□□□□□ -1.34
ARHGEF12-202ENST00000397843 FHAD1B1AJZ9 1412 aa6.65□□□□□ -1.35
ARHGEF12-202ENST00000397843 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP6.65□□□□□ -1.35
ARHGEF12-202ENST00000397843 HNRNPUL2Q1KMD3 747 aaKnown RBP6.65□□□□□ -1.35
ARHGEF12-202ENST00000397843 ZBTB47Q9UFB7 747 aaPredicted RBP6.64□□□□□ -1.35
ARHGEF12-202ENST00000397843 TOP2AP11388 1531 aaKnown RBP6.63□□□□□ -1.35
ARHGEF12-202ENST00000397843 TNIKQ9UKE5 1360 aa6.62□□□□□ -1.35
ARHGEF12-202ENST00000397843 FAM50AQ14320 339 aaKnown RBP6.62□□□□□ -1.35
ARHGEF12-202ENST00000397843 GLIPR1L2Q4G1C9 344 aa6.62□□□□□ -1.35
ARHGEF12-202ENST00000397843 ANP32EQ9BTT0 268 aa6.62□□□□□ -1.35
ARHGEF12-202ENST00000397843 KIF27Q86VH2 1401 aa6.62□□□□□ -1.35
ARHGEF12-202ENST00000397843 LOC105371045A0A1W2PR82 267 aa6.62□□□□□ -1.35
ARHGEF12-202ENST00000397843 ANP32BQ92688 251 aaKnown RBP6.61□□□□□ -1.35
ARHGEF12-202ENST00000397843 ARID4BQ4LE39 1312 aaPredicted RBP6.6□□□□□ -1.35
ARHGEF12-202ENST00000397843 WRNQ14191 1432 aaPredicted RBP eCLIP6.6□□□□□ -1.35
ARHGEF12-202ENST00000397843 CEP162Q5TB80 1403 aa6.6□□□□□ -1.35
ARHGEF12-202ENST00000397843 SLC24A1O60721 1099 aa6.6□□□□□ -1.35
ARHGEF12-202ENST00000397843 UPF2Q9HAU5 1272 aaKnown RBP6.6□□□□□ -1.35
ARHGEF12-202ENST00000397843 TIMELESSQ9UNS1 1208 aa6.6□□□□□ -1.35
ARHGEF12-202ENST00000397843 ITGAEP38570 1179 aa6.57□□□□□ -1.36
ARHGEF12-202ENST00000397843 GTF3C3Q9Y5Q9 886 aa6.57□□□□□ -1.36
ARHGEF12-202ENST00000397843 TRIM52Q96A61 297 aa6.57□□□□□ -1.36
ARHGEF12-202ENST00000397843 GOLGA6L2Q8N9W4 650 aaPredicted RBP6.57□□□□□ -1.36
ARHGEF12-202ENST00000397843 CANXP27824 592 aaKnown RBP6.56□□□□□ -1.36
ARHGEF12-202ENST00000397843 SMARCA4P51532 1647 aa6.55□□□□□ -1.36
ARHGEF12-202ENST00000397843 MTUS2Q5JR59 1369 aa6.53□□□□□ -1.36
ARHGEF12-202ENST00000397843 ERICH6BQ5W0A0 696 aa6.53□□□□□ -1.36
ARHGEF12-202ENST00000397843 CDCA8Q53HL2 280 aa6.52□□□□□ -1.37
ARHGEF12-202ENST00000397843 DDRGK1Q96HY6 314 aa6.52□□□□□ -1.37
ARHGEF12-202ENST00000397843 VPS8Q8N3P4 1428 aa6.51□□□□□ -1.37
ARHGEF12-202ENST00000397843 POLR3GLQ9BT43 218 aa6.51□□□□□ -1.37
ARHGEF12-202ENST00000397843 CHMP4BQ9H444 224 aaKnown RBP6.51□□□□□ -1.37
ARHGEF12-202ENST00000397843 FMN1Q68DA7 1419 aa6.5□□□□□ -1.37
ARHGEF12-202ENST00000397843 ABCC8Q09428 1581 aa6.5□□□□□ -1.37
ARHGEF12-202ENST00000397843 ARHGAP35Q9NRY4 1499 aa6.49□□□□□ -1.37
ARHGEF12-202ENST00000397843 CUX1P39880 1505 aa6.48□□□□□ -1.37
ARHGEF12-202ENST00000397843 KIF21BO75037 1637 aa6.48□□□□□ -1.37
ARHGEF12-202ENST00000397843 BECN1Q14457 450 aa6.48□□□□□ -1.37
ARHGEF12-202ENST00000397843 CFAP44Q96MT7 982 aa6.47□□□□□ -1.37
ARHGEF12-202ENST00000397843 ERICH3Q5RHP9 1530 aa6.46□□□□□ -1.38
ARHGEF12-202ENST00000397843 MYH16Q9H6N6 1097 aa6.45□□□□□ -1.38
ARHGEF12-202ENST00000397843 MS4A1P11836 297 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms