Protein–RNA interactions for Protein: P23396

RPS3, 40S ribosomal protein S3, humanhuman

Known RBP eCLIP

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3P23396 CTNNB1-215ENST00000488914 804 ntTSL 23.83□□□□□ -1.86e-8■■■■□ 20
RPS3P23396 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC4.45□□□□□ -1.73e-8■■■■□ 19.9
RPS3P23396 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC2.08□□□□□ -2.083e-8■■■■□ 19.9
RPS3P23396 C2-210ENST00000468407 694 ntTSL 210.81□□□□□ -0.682e-7■■■■□ 19.9
RPS3P23396 B2M-202ENST00000544417 933 ntTSL 5 BASIC10.52□□□□□ -0.732e-8■■■■□ 19.9
RPS3P23396 B2M-204ENST00000558401 1715 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.852e-8■■■■□ 19.9
RPS3P23396 B2M-212ENST00000561424 604 ntTSL 38.68□□□□□ -1.022e-8■■■■□ 19.9
RPS3P23396 B2M-206ENST00000559720 1220 ntTSL 58.56□□□□□ -1.042e-8■■■■□ 19.9
RPS3P23396 B2M-203ENST00000557901 407 ntTSL 1 (best)7.69□□□□□ -1.182e-8■■■■□ 19.9
RPS3P23396 B2M-201ENST00000349264 732 ntTSL 36.21□□□□□ -1.422e-8■■■■□ 19.9
RPS3P23396 HLA-C-208ENST00000487245 1880 nt25.77■■□□□ 1.723e-7■■■■□ 19.9
RPS3P23396 NCSTN-205ENST00000424754 659 ntTSL 59.06□□□□□ -0.961e-6■■■■□ 19.9
RPS3P23396 ANXA1-208ENST00000495713 905 ntTSL 25.22□□□□□ -1.573e-8■■■■□ 19.9
RPS3P23396 CTSB-217ENST00000530296 561 ntTSL 413.79□□□□□ -0.22e-9■■■■□ 19.9
RPS3P23396 ADH5-211ENST00000512659 822 ntTSL 510.53□□□□□ -0.723e-7■■■■□ 19.9
RPS3P23396 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.269e-9■■■■□ 19.9
RPS3P23396 CDK1-203ENST00000395284 1913 ntAPPRIS P2 TSL 1 (best) BASIC8.18□□□□□ -1.19e-9■■■■□ 19.9
RPS3P23396 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.11□□□□□ -1.919e-9■■■■□ 19.9
RPS3P23396 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC0.44□□□□□ -2.349e-9■■■■□ 19.9
RPS3P23396 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.323e-7■■■■□ 19.9
RPS3P23396 ATP1A1-206ENST00000463382 584 ntTSL 26.77□□□□□ -1.334e-11■■■■□ 19.9
RPS3P23396 PTBP1-217ENST00000592113 1548 ntTSL 522.29■■□□□ 1.161e-8■■■■□ 19.9
RPS3P23396 TMBIM1-203ENST00000413976 348 ntTSL 411.35□□□□□ -0.594e-10■■■■□ 19.9
RPS3P23396 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.147e-7■■■■□ 19.9
RPS3P23396 UQCRC2-210ENST00000567757 538 ntTSL 46.02□□□□□ -1.456e-9■■■■□ 19.9
RPS3P23396 SSR4-207ENST00000471724 443 ntTSL 313.85□□□□□ -0.191e-6■■■■□ 19.9
RPS3P23396 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.436e-7■■■■□ 19.9
RPS3P23396 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC6□□□□□ -1.456e-7■■■■□ 19.9
RPS3P23396 SERPINA3-207ENST00000556388 480 ntTSL 48.3□□□□□ -1.083e-21■■■■□ 19.9
RPS3P23396 FDFT1-203ENST00000446331 1558 ntTSL 223.55■■□□□ 1.362e-10■■■■□ 19.9
RPS3P23396 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.022e-10■■■■□ 19.9
RPS3P23396 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC19.49■□□□□ 0.712e-10■■■■□ 19.9
RPS3P23396 FDFT1-207ENST00000525607 1773 ntTSL 218.58■□□□□ 0.562e-10■■■■□ 19.9
RPS3P23396 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC18.49■□□□□ 0.552e-10■■■■□ 19.9
RPS3P23396 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.022e-10■■■■□ 19.9
RPS3P23396 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC14.82□□□□□ -0.042e-10■■■■□ 19.9
RPS3P23396 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.152e-10■■■■□ 19.9
RPS3P23396 FDFT1-222ENST00000538689 2289 ntTSL 2 BASIC6.97□□□□□ -1.292e-10■■■■□ 19.9
RPS3P23396 PSMD14-202ENST00000437630 577 ntTSL 510.13□□□□□ -0.791e-7■■■■□ 19.9
RPS3P23396 H3F3A-201ENST00000366813 1308 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.434e-9■■■■□ 19.9
RPS3P23396 PSMA4-207ENST00000558635 736 ntTSL 1 (best)10.2□□□□□ -0.785e-7■■■■□ 19.9
RPS3P23396 RHOA-204ENST00000431929 539 ntTSL 418.59■□□□□ 0.578e-8■■■■□ 19.9
RPS3P23396 PDHA1-212ENST00000540249 3277 ntTSL 2 BASIC13.03□□□□□ -0.329e-7■■■■□ 19.9
RPS3P23396 PDHA1-206ENST00000422285 3310 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.429e-7■■■■□ 19.9
RPS3P23396 PDHA1-213ENST00000545074 3391 ntAPPRIS ALT1 TSL 2 BASIC12.24□□□□□ -0.459e-7■■■■□ 19.9
RPS3P23396 PDHA1-204ENST00000379806 3484 ntTSL 1 (best) BASIC10.92□□□□□ -0.669e-7■■■■□ 19.9
RPS3P23396 TNPO3-203ENST00000471234 3283 ntTSL 1 (best) BASIC8.76□□□□□ -1.013e-6■■■■□ 19.9
RPS3P23396 TNPO3-205ENST00000627585 4514 ntTSL 2 BASIC8.75□□□□□ -1.013e-6■■■■□ 19.9
RPS3P23396 TNPO3-204ENST00000482320 3585 ntTSL 1 (best) BASIC7.86□□□□□ -1.153e-6■■■■□ 19.9
RPS3P23396 KIF2C-203ENST00000423289 320 ntTSL 56.37□□□□□ -1.392e-7■■■■□ 19.8
RPS3P23396 PLD3-213ENST00000488311 750 ntTSL 211.83□□□□□ -0.521e-7■■■■□ 19.8
RPS3P23396 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.167e-7■■■■□ 19.8
RPS3P23396 TMBIM1-202ENST00000396809 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.287e-7■■■■□ 19.8
RPS3P23396 TMBIM1-214ENST00000444881 2936 ntAPPRIS P1 TSL 2 BASIC11.02□□□□□ -0.657e-7■■■■□ 19.8
RPS3P23396 TMBIM1-209ENST00000437694 992 ntTSL 210.4□□□□□ -0.747e-7■■■■□ 19.8
RPS3P23396 TMBIM1-215ENST00000445635 1251 ntTSL 2 BASIC9.6□□□□□ -0.877e-7■■■■□ 19.8
RPS3P23396 AL645922.1-201ENST00000456570 3874 ntAPPRIS P1 TSL 2 BASIC9.53□□□□□ -0.882e-7■■■■□ 19.8
RPS3P23396 CKB-206ENST00000553994 746 ntTSL 228.61■■■□□ 2.171e-9■■■■□ 19.8
RPS3P23396 CKB-214ENST00000555770 816 ntTSL 424.91■■□□□ 1.581e-9■■■■□ 19.8
RPS3P23396 CKB-209ENST00000554705 803 ntTSL 218.72■□□□□ 0.591e-9■■■■□ 19.8
RPS3P23396 CKB-213ENST00000555659 755 ntTSL 218.07■□□□□ 0.481e-9■■■■□ 19.8
RPS3P23396 CKB-216ENST00000557530 523 ntTSL 413.12□□□□□ -0.311e-9■■■■□ 19.8
RPS3P23396 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.482e-7■■■■□ 19.8
RPS3P23396 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC15.31■□□□□ 0.042e-7■■■■□ 19.8
RPS3P23396 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC14.18□□□□□ -0.142e-7■■■■□ 19.8
RPS3P23396 EMC1-205ENST00000467423 589 ntTSL 211.41□□□□□ -0.586e-13■■■■□ 19.8
RPS3P23396 C3-218ENST00000602229 585 ntTSL 210.6□□□□□ -0.716e-27■■■■□ 19.8
RPS3P23396 EIF4A1-220ENST00000581808 205 ntTSL 33.53□□□□□ -1.842e-17■■■■□ 19.8
RPS3P23396 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.575e-7■■■■□ 19.8
RPS3P23396 GABARAPL2-204ENST00000565985 2274 nt7.61□□□□□ -1.192e-10■■■■□ 19.8
RPS3P23396 PLXNB2-203ENST00000425954 609 ntTSL 216.89■□□□□ 0.291e-7■■■■□ 19.8
RPS3P23396 YWHAZ-217ENST00000521328 511 ntTSL 59.81□□□□□ -0.844e-9■■■■□ 19.8
RPS3P23396 P4HB-218ENST00000574007 1053 ntTSL 213.5□□□□□ -0.257e-21■■■■□ 19.8
RPS3P23396 CHMP1A-207ENST00000549328 1003 ntTSL 318.03■□□□□ 0.483e-6■■■■□ 19.8
RPS3P23396 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC16.75■□□□□ 0.273e-6■■■■□ 19.8
RPS3P23396 CHMP1A-204ENST00000547687 2007 ntTSL 1 (best)16.24■□□□□ 0.193e-6■■■■□ 19.8
RPS3P23396 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC15.78■□□□□ 0.123e-6■■■■□ 19.8
RPS3P23396 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.063e-6■■■■□ 19.8
RPS3P23396 CHMP1A-206ENST00000549139 812 ntTSL 215.31■□□□□ 0.043e-6■■■■□ 19.8
RPS3P23396 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.14e-8■■■■□ 19.8
RPS3P23396 NDUFC2-KCTD14-202ENST00000530054 656 ntAPPRIS P3 TSL 2 BASIC13.56□□□□□ -0.244e-8■■■■□ 19.8
RPS3P23396 NDUFC2-KCTD14-201ENST00000528251 566 ntTSL 4 BASIC10.9□□□□□ -0.664e-8■■■■□ 19.8
RPS3P23396 NDUFC2-KCTD14-204ENST00000614236 386 ntTSL 5 BASIC10.61□□□□□ -0.715e-8■■■■□ 19.8
RPS3P23396 NDUFC2-203ENST00000527806 1888 ntTSL 2 BASIC10.13□□□□□ -0.794e-8■■■■□ 19.8
RPS3P23396 NDUFC2-KCTD14-203ENST00000612612 530 ntAPPRIS ALT2 TSL 2 BASIC9.79□□□□□ -0.845e-8■■■■□ 19.8
RPS3P23396 NDUFC2-202ENST00000525085 495 ntTSL 3 BASIC8.58□□□□□ -1.044e-8■■■■□ 19.8
RPS3P23396 NDUFC2-205ENST00000534029 422 ntTSL 2 BASIC8.58□□□□□ -1.044e-8■■■■□ 19.8
RPS3P23396 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC21.25■□□□□ 0.992e-6■■■■□ 19.8
RPS3P23396 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC20.47■□□□□ 0.872e-6■■■■□ 19.8
RPS3P23396 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.832e-6■■■■□ 19.8
RPS3P23396 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC20.02■□□□□ 0.82e-6■■■■□ 19.8
RPS3P23396 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC19.65■□□□□ 0.742e-6■■■■□ 19.8
RPS3P23396 OTUB1-205ENST00000535140 638 ntTSL 317.59■□□□□ 0.412e-6■■■■□ 19.8
RPS3P23396 C19orf70-205ENST00000590075 773 ntTSL 217.03■□□□□ 0.323e-6■■■■□ 19.8
RPS3P23396 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.163e-6■■■■□ 19.8
RPS3P23396 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC16.05■□□□□ 0.162e-6■■■■□ 19.8
RPS3P23396 OTUB1-201ENST00000301453 2493 ntTSL 215.94■□□□□ 0.142e-6■■■■□ 19.8
RPS3P23396 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC15.49■□□□□ 0.072e-6■■■■□ 19.8
RPS3P23396 C19orf70-203ENST00000587589 577 ntTSL 5 BASIC12.92□□□□□ -0.343e-6■■■■□ 19.8
RPS3P23396 FCGR2A-209ENST00000482233 444 ntTSL 210.01□□□□□ -0.812e-6■■■■□ 19.8
Retrieved 100 of 24,271 protein–RNA pairs in 201.8 ms