RNA–Protein interactions for RNA: ENST00000488914.1

CTNNB1-215, Transcript of catenin beta 1, humanhuman

TSL 2

Gene CTNNB1, Length 804 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNB1-215ENST00000488914 AEBP2Q6ZN18 517 aaPredicted RBP29.72■■■□□ 2.35
CTNNB1-215ENST00000488914 CHIC1Q5VXU3 224 aa28.46■■■□□ 2.15
CTNNB1-215ENST00000488914 SENP3Q9H4L4 574 aaPredicted RBP25.13■■□□□ 1.61
CTNNB1-215ENST00000488914 PHF23Q9BUL5 403 aaPredicted RBP25.07■■□□□ 1.6
CTNNB1-215ENST00000488914 FOXD1Q16676 465 aa23.5■■□□□ 1.35
CTNNB1-215ENST00000488914 PLPPR3Q6T4P5 718 aa22.83■■□□□ 1.25
CTNNB1-215ENST00000488914 PPP6R1Q9UPN7 881 aa22.3■■□□□ 1.16
CTNNB1-215ENST00000488914 ADRA2BP18089 450 aa22.22■■□□□ 1.15
CTNNB1-215ENST00000488914 PIAS4Q8N2W9 510 aaPredicted RBP21.99■■□□□ 1.11
CTNNB1-215ENST00000488914 MSH5O43196 834 aa21.72■■□□□ 1.07
CTNNB1-215ENST00000488914 POTEDQ86YR6 584 aa20.75■□□□□ 0.91
CTNNB1-215ENST00000488914 MAPK8IP2Q13387 824 aaPredicted RBP20.35■□□□□ 0.85
CTNNB1-215ENST00000488914 SCAF1Q9H7N4 1312 aaKnown RBP20.15■□□□□ 0.82
CTNNB1-215ENST00000488914 PPP4R3CPQ6ZMV5 832 aa20.12■□□□□ 0.81
CTNNB1-215ENST00000488914 DMRT2Q9Y5R5 561 aa20.03■□□□□ 0.8
CTNNB1-215ENST00000488914 CNKSR2Q8WXI2 1034 aa19.61■□□□□ 0.73
CTNNB1-215ENST00000488914 HOXD11P31277 338 aaPredicted RBP19.42■□□□□ 0.7
CTNNB1-215ENST00000488914 NCBP3Q53F19 620 aaKnown RBP19.35■□□□□ 0.69
CTNNB1-215ENST00000488914 RNF216Q9NWF9 866 aaPredicted RBP19.35■□□□□ 0.69
CTNNB1-215ENST00000488914 DCAF8L1A6NGE4 600 aa19.21■□□□□ 0.67
CTNNB1-215ENST00000488914 NPM3O75607 178 aaKnown RBP19.19■□□□□ 0.66
CTNNB1-215ENST00000488914 KCNA4P22459 653 aa19.17■□□□□ 0.66
CTNNB1-215ENST00000488914 RNF39Q9H2S5 420 aa18.64■□□□□ 0.57
CTNNB1-215ENST00000488914 DNAJC5BQ9UF47 199 aa18.59■□□□□ 0.57
CTNNB1-215ENST00000488914 CACNB1Q02641 598 aaPredicted RBP18.5■□□□□ 0.55
CTNNB1-215ENST00000488914 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.5■□□□□ 0.552e-13■■□□□ 11.9
CTNNB1-215ENST00000488914 C1QBPQ07021 282 aaKnown RBP18.33■□□□□ 0.52
CTNNB1-215ENST00000488914 SLC4A2P04920 1241 aa18.28■□□□□ 0.52
CTNNB1-215ENST00000488914 U3KPZ7 1027 aaPredicted RBP18.21■□□□□ 0.51
CTNNB1-215ENST00000488914 SLC4A1APQ9BWU0 796 aaKnown RBP18.09■□□□□ 0.49
CTNNB1-215ENST00000488914 SPINK5Q9NQ38 1064 aaPredicted RBP17.88■□□□□ 0.45
CTNNB1-215ENST00000488914 CAPN15O75808 1086 aa17.76■□□□□ 0.43
CTNNB1-215ENST00000488914 FOXD4L1Q9NU39 408 aa17.69■□□□□ 0.42
CTNNB1-215ENST00000488914 ZBTB22O15209 634 aa17.68■□□□□ 0.42
CTNNB1-215ENST00000488914 MYCNP04198 464 aaPredicted RBP17.66■□□□□ 0.42
CTNNB1-215ENST00000488914 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.64■□□□□ 0.41
CTNNB1-215ENST00000488914 HNRNPUL2Q1KMD3 747 aaKnown RBP17.64■□□□□ 0.41
CTNNB1-215ENST00000488914 SAMD1Q6SPF0 538 aaPredicted RBP17.6■□□□□ 0.41
CTNNB1-215ENST00000488914 DSG3P32926 999 aa17.59■□□□□ 0.41
CTNNB1-215ENST00000488914 TRHP20396 242 aaPredicted RBP17.58■□□□□ 0.4
CTNNB1-215ENST00000488914 APLP2Q06481 763 aa17.53■□□□□ 0.4
CTNNB1-215ENST00000488914 ZNF219Q9P2Y4 722 aaPredicted RBP17.46■□□□□ 0.39
CTNNB1-215ENST00000488914 ABCB7O75027 752 aa17.44■□□□□ 0.38
CTNNB1-215ENST00000488914 ATF5Q9Y2D1 282 aaPredicted RBP17.39■□□□□ 0.37
CTNNB1-215ENST00000488914 POLA2Q14181 598 aa17.19■□□□□ 0.34
CTNNB1-215ENST00000488914 CSRNP3Q8WYN3 585 aa17.14■□□□□ 0.33
CTNNB1-215ENST00000488914 EHMT2Q96KQ7 1210 aa17.1■□□□□ 0.33
CTNNB1-215ENST00000488914 ATXN8OSP0DMR3 200 aa17.05■□□□□ 0.32
CTNNB1-215ENST00000488914 ZBTB12Q9Y330 459 aaPredicted RBP16.72■□□□□ 0.27
CTNNB1-215ENST00000488914 RBM42Q9BTD8 480 aaKnown RBP16.65■□□□□ 0.26
CTNNB1-215ENST00000488914 OSCARQ8IYS5 282 aa16.63■□□□□ 0.25
CTNNB1-215ENST00000488914 MKRN4PQ13434 485 aaPredicted RBP16.58■□□□□ 0.24
CTNNB1-215ENST00000488914 FBLN2P98095 1184 aa16.5■□□□□ 0.23
CTNNB1-215ENST00000488914 AKT1S1Q96B36 256 aa16.39■□□□□ 0.21
CTNNB1-215ENST00000488914 POTEHQ6S545 545 aa16.3■□□□□ 0.2
CTNNB1-215ENST00000488914 REM2Q8IYK8 340 aaPredicted RBP16.3■□□□□ 0.2
CTNNB1-215ENST00000488914 SPDYE2BA6NHP3 402 aa16.29■□□□□ 0.2
CTNNB1-215ENST00000488914 SPDYE6P0CI01 402 aa16.29■□□□□ 0.2
CTNNB1-215ENST00000488914 SPDYE2Q495Y8 402 aa16.29■□□□□ 0.2
CTNNB1-215ENST00000488914 CHRDL2Q6WN34 429 aa16.24■□□□□ 0.19
CTNNB1-215ENST00000488914 ZNF692Q9BU19 519 aaPredicted RBP16.2■□□□□ 0.18
CTNNB1-215ENST00000488914 SSUH2Q9Y2M2 353 aa16.16■□□□□ 0.18
CTNNB1-215ENST00000488914 PITPNM1O00562 1244 aa16.14■□□□□ 0.17
CTNNB1-215ENST00000488914 PABPN1Q86U42 306 aaKnown RBP eCLIP15.99■□□□□ 0.15
CTNNB1-215ENST00000488914 PIP4P2Q8N4L2 257 aa15.97■□□□□ 0.15
CTNNB1-215ENST00000488914 CLEC11AQ9Y240 323 aa15.94■□□□□ 0.14
CTNNB1-215ENST00000488914 SPDYE1Q8NFV5 336 aaPredicted RBP15.92■□□□□ 0.14
CTNNB1-215ENST00000488914 FXR2P51116 673 aaKnown RBP eCLIP15.91■□□□□ 0.142e-6■■■■□ 25.6
CTNNB1-215ENST00000488914 SPDYE4A6NLX3 237 aa15.89■□□□□ 0.13
CTNNB1-215ENST00000488914 PRKAR2AP13861 404 aaKnown RBP15.71■□□□□ 0.11
CTNNB1-215ENST00000488914 PRR29P0C7W0 189 aa15.7■□□□□ 0.1
CTNNB1-215ENST00000488914 CHADLQ6NUI6 762 aa15.67■□□□□ 0.1
CTNNB1-215ENST00000488914 HAX1O00165 279 aa15.56■□□□□ 0.08
CTNNB1-215ENST00000488914 PROM2Q8N271 834 aa15.56■□□□□ 0.08
CTNNB1-215ENST00000488914 EVX2Q03828 476 aa15.52■□□□□ 0.08
CTNNB1-215ENST00000488914 STAG3Q9UJ98 1225 aa15.52■□□□□ 0.08
CTNNB1-215ENST00000488914 FKBP8Q14318 412 aa15.48■□□□□ 0.07
CTNNB1-215ENST00000488914 CREBZFQ9NS37 354 aa15.45■□□□□ 0.06
CTNNB1-215ENST00000488914 SP7Q8TDD2 431 aaPredicted RBP15.42■□□□□ 0.06
CTNNB1-215ENST00000488914 FARP1Q9Y4F1 1045 aaPredicted RBP15.4■□□□□ 0.06
CTNNB1-215ENST00000488914 C19orf67A6NJJ6 358 aa15.38■□□□□ 0.05
CTNNB1-215ENST00000488914 MNX1P50219 401 aaPredicted RBP15.24■□□□□ 0.03
CTNNB1-215ENST00000488914 CD44P16070 742 aaKnown RBP15.22■□□□□ 0.03
CTNNB1-215ENST00000488914 MIER1Q8N108 512 aa15.12■□□□□ 0.01
CTNNB1-215ENST00000488914 GABBR2O75899 941 aa15.1■□□□□ 0.01
CTNNB1-215ENST00000488914 ZRANB1Q9UGI0 708 aa15.07■□□□□ 0
CTNNB1-215ENST00000488914 NPM1P06748 294 aaKnown RBP eCLIP15.06■□□□□ 0
CTNNB1-215ENST00000488914 PLCD3Q8N3E9 789 aa15.02■□□□□ -0
CTNNB1-215ENST00000488914 ZNF579Q8NAF0 562 aaKnown RBP14.98□□□□□ -0.01
CTNNB1-215ENST00000488914 PLEKHG5O94827 1062 aa14.95□□□□□ -0.02
CTNNB1-215ENST00000488914 FBXO3Q9UK99 471 aa14.94□□□□□ -0.02
CTNNB1-215ENST00000488914 PHF12Q96QT6 1004 aa14.93□□□□□ -0.02
CTNNB1-215ENST00000488914 PAK3O75914 559 aaPredicted RBP14.91□□□□□ -0.02
CTNNB1-215ENST00000488914 TSPYL2Q9H2G4 693 aaPredicted RBP14.91□□□□□ -0.02
CTNNB1-215ENST00000488914 RASEFQ8IZ41 740 aa14.88□□□□□ -0.03
CTNNB1-215ENST00000488914 GALR2O43603 387 aaPredicted RBP14.84□□□□□ -0.03
CTNNB1-215ENST00000488914 POTEIP0CG38 1075 aa14.84□□□□□ -0.03
CTNNB1-215ENST00000488914 VASPP50552 380 aaPredicted RBP14.84□□□□□ -0.03
CTNNB1-215ENST00000488914 NUBP1P53384 320 aa14.82□□□□□ -0.04
CTNNB1-215ENST00000488914 CCDC61Q9Y6R9 512 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 106.6 ms