RNA–Protein interactions for RNA: ENST00000471234.5

TNPO3-203, Transcript of transportin 3, humanhuman

TSL 1 (best) BASIC

Gene TNPO3, Length 3,283 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO3-203ENST00000471234 NISCHQ9Y2I1 1504 aa19.25■□□□□ 0.67
TNPO3-203ENST00000471234 CCDC180Q9P1Z9 1646 aa17.63■□□□□ 0.41
TNPO3-203ENST00000471234 DCAF8L2P0C7V8 631 aa17.06■□□□□ 0.32
TNPO3-203ENST00000471234 MYO15BQ96JP2 1530 aa16.82■□□□□ 0.28
TNPO3-203ENST00000471234 DCAF1Q9Y4B6 1507 aa16.72■□□□□ 0.27
TNPO3-203ENST00000471234 SHROOM4Q9ULL8 1493 aa16.61■□□□□ 0.25
TNPO3-203ENST00000471234 ABCC9O60706 1549 aa16.28■□□□□ 0.2
TNPO3-203ENST00000471234 SUPT5HO00267 1087 aaKnown RBP16.12■□□□□ 0.17
TNPO3-203ENST00000471234 ZCCHC6Q5VYS8 1495 aaKnown RBP16.08■□□□□ 0.16
TNPO3-203ENST00000471234 NACADO15069 1562 aa15.85■□□□□ 0.13
TNPO3-203ENST00000471234 PABPN1Q86U42 306 aaKnown RBP eCLIP15.65■□□□□ 0.13e-6■■□□□ 12.4
TNPO3-203ENST00000471234 SCRIBQ14160 1630 aa15.65■□□□□ 0.1
TNPO3-203ENST00000471234 RB1CC1Q8TDY2 1594 aa15.42■□□□□ 0.06
TNPO3-203ENST00000471234 UNC13AQ9UPW8 1703 aa15.4■□□□□ 0.06
TNPO3-203ENST00000471234 PEG3Q9GZU2 1588 aa15.26■□□□□ 0.03
TNPO3-203ENST00000471234 CECR2Q9BXF3 1484 aa15.2■□□□□ 0.02
TNPO3-203ENST00000471234 RSF1Q96T23 1441 aaPredicted RBP15.11■□□□□ 0.01
TNPO3-203ENST00000471234 EHMT2Q96KQ7 1210 aa15.1■□□□□ 0.01
TNPO3-203ENST00000471234 CHIC1Q5VXU3 224 aa15.04■□□□□ -0
TNPO3-203ENST00000471234 FAM9AQ8IZU1 332 aaPredicted RBP15.01□□□□□ -0.01
TNPO3-203ENST00000471234 MROH2BQ7Z745 1585 aa15□□□□□ -0.01
TNPO3-203ENST00000471234 SMARCA2P51531 1590 aa14.98□□□□□ -0.01
TNPO3-203ENST00000471234 BICRAQ9NZM4 1560 aa14.98□□□□□ -0.01
TNPO3-203ENST00000471234 TRIM41Q8WV44 630 aa14.94□□□□□ -0.02
TNPO3-203ENST00000471234 PRDM2Q13029 1718 aa14.9□□□□□ -0.02
TNPO3-203ENST00000471234 WIZO95785 1651 aa14.86□□□□□ -0.03
TNPO3-203ENST00000471234 BAZ1AQ9NRL2 1556 aaPredicted RBP14.84□□□□□ -0.03
TNPO3-203ENST00000471234 LOC105371045A0A1W2PR82 267 aa14.78□□□□□ -0.04
TNPO3-203ENST00000471234 SMARCA4P51532 1647 aa14.73□□□□□ -0.05
TNPO3-203ENST00000471234 HMGXB3Q12766 1538 aa14.71□□□□□ -0.05
TNPO3-203ENST00000471234 BAZ1BQ9UIG0 1483 aaKnown RBP14.65□□□□□ -0.06
TNPO3-203ENST00000471234 EIF4G1Q04637 1599 aaKnown RBP14.63□□□□□ -0.07
TNPO3-203ENST00000471234 CCDC88BA6NC98 1476 aa14.62□□□□□ -0.07
TNPO3-203ENST00000471234 ATAD2BQ9ULI0 1458 aa14.62□□□□□ -0.07
TNPO3-203ENST00000471234 RANGAP1P46060 587 aaPredicted RBP14.55□□□□□ -0.08
TNPO3-203ENST00000471234 TOP2AP11388 1531 aaKnown RBP14.54□□□□□ -0.08
TNPO3-203ENST00000471234 DNAJC5BQ9UF47 199 aa14.51□□□□□ -0.09
TNPO3-203ENST00000471234 WDR97A6NE52 1622 aa14.48□□□□□ -0.09
TNPO3-203ENST00000471234 ABCC8Q09428 1581 aa14.45□□□□□ -0.1
TNPO3-203ENST00000471234 UBTFP17480 764 aaKnown RBP14.44□□□□□ -0.1
TNPO3-203ENST00000471234 TTBK1Q5TCY1 1321 aaPredicted RBP14.4□□□□□ -0.1
TNPO3-203ENST00000471234 PPARGC1BQ86YN6 1023 aaKnown RBP14.39□□□□□ -0.11
TNPO3-203ENST00000471234 CC2D2AQ9P2K1 1620 aa14.38□□□□□ -0.11
TNPO3-203ENST00000471234 NCAPD3P42695 1498 aa14.37□□□□□ -0.11
TNPO3-203ENST00000471234 WRNQ14191 1432 aaPredicted RBP eCLIP14.32□□□□□ -0.123e-7■■■■■ 36.2
TNPO3-203ENST00000471234 CSRNP3Q8WYN3 585 aa14.28□□□□□ -0.12
TNPO3-203ENST00000471234 SOGA1O94964 1423 aa14.27□□□□□ -0.13
TNPO3-203ENST00000471234 PCGF6Q9BYE7 350 aa14.26□□□□□ -0.13
TNPO3-203ENST00000471234 CADPSQ9ULU8 1353 aa14.23□□□□□ -0.13
TNPO3-203ENST00000471234 NESP48681 1621 aa14.2□□□□□ -0.14
TNPO3-203ENST00000471234 RUSC2Q8N2Y8 1516 aa14.19□□□□□ -0.14
TNPO3-203ENST00000471234 BIVM-ERCC5R4GMW8 1640 aa14.13□□□□□ -0.15
TNPO3-203ENST00000471234 CFTRP13569 1480 aa14.11□□□□□ -0.15
TNPO3-203ENST00000471234 ATP1B4Q9UN42 357 aaPredicted RBP14.1□□□□□ -0.15
TNPO3-203ENST00000471234 FANCD2Q9BXW9 1451 aa14.07□□□□□ -0.16
TNPO3-203ENST00000471234 SYNJ1O43426 1573 aa14.07□□□□□ -0.16
TNPO3-203ENST00000471234 LAMC3Q9Y6N6 1575 aa14.04□□□□□ -0.16
TNPO3-203ENST00000471234 APLP2Q06481 763 aa14.04□□□□□ -0.16
TNPO3-203ENST00000471234 P3H3Q8IVL6 736 aa14.03□□□□□ -0.16
TNPO3-203ENST00000471234 FBLN2P98095 1184 aa14.01□□□□□ -0.17
TNPO3-203ENST00000471234 PDS5BQ9NTI5 1447 aa14□□□□□ -0.17
TNPO3-203ENST00000471234 CUX2O14529 1486 aa13.99□□□□□ -0.17
TNPO3-203ENST00000471234 ERCC6Q03468 1493 aa13.99□□□□□ -0.17
TNPO3-203ENST00000471234 TDRD9Q8NDG6 1382 aaKnown RBP13.98□□□□□ -0.17
TNPO3-203ENST00000471234 CUX1P39880 1505 aa13.97□□□□□ -0.17
TNPO3-203ENST00000471234 KIF27Q86VH2 1401 aa13.96□□□□□ -0.17
TNPO3-203ENST00000471234 CEP164Q9UPV0 1460 aa13.96□□□□□ -0.17
TNPO3-203ENST00000471234 RAD54L2Q9Y4B4 1467 aa13.95□□□□□ -0.18
TNPO3-203ENST00000471234 HRCP23327 699 aa13.94□□□□□ -0.18
TNPO3-203ENST00000471234 EEA1Q15075 1411 aa13.93□□□□□ -0.18
TNPO3-203ENST00000471234 FGD5Q6ZNL6 1462 aa13.93□□□□□ -0.18
TNPO3-203ENST00000471234 TRIM26Q12899 539 aaPredicted RBP13.91□□□□□ -0.18
TNPO3-203ENST00000471234 CEP162Q5TB80 1403 aa13.91□□□□□ -0.18
TNPO3-203ENST00000471234 GOLGA3Q08378 1498 aa13.9□□□□□ -0.18
TNPO3-203ENST00000471234 RAPGEF2Q9Y4G8 1499 aa13.9□□□□□ -0.19
TNPO3-203ENST00000471234 TOP2BQ02880 1626 aa13.88□□□□□ -0.19
TNPO3-203ENST00000471234 TNIKQ9UKE5 1360 aa13.86□□□□□ -0.19
TNPO3-203ENST00000471234 CARMIL1Q5VZK9 1371 aa13.86□□□□□ -0.19
TNPO3-203ENST00000471234 ARID3CA6NKF2 412 aa13.85□□□□□ -0.19
TNPO3-203ENST00000471234 CLIP1P30622 1438 aa13.84□□□□□ -0.19
TNPO3-203ENST00000471234 TOPBP1Q92547 1522 aa13.83□□□□□ -0.19
TNPO3-203ENST00000471234 IGF1RP08069 1367 aa13.82□□□□□ -0.2
TNPO3-203ENST00000471234 POLA1P09884 1462 aaPredicted RBP13.81□□□□□ -0.2
TNPO3-203ENST00000471234 URB2Q14146 1524 aaKnown RBP13.8□□□□□ -0.2
TNPO3-203ENST00000471234 HNRNPUL2Q1KMD3 747 aaKnown RBP13.78□□□□□ -0.2
TNPO3-203ENST00000471234 AQRO60306 1485 aaKnown RBP eCLIP13.77□□□□□ -0.24e-7■■■■□ 25.8
TNPO3-203ENST00000471234 ITGAEP38570 1179 aa13.77□□□□□ -0.2
TNPO3-203ENST00000471234 CHMP7Q8WUX9 453 aaPredicted RBP13.77□□□□□ -0.21
TNPO3-203ENST00000471234 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.75□□□□□ -0.21
TNPO3-203ENST00000471234 DNMBPQ6XZF7 1577 aa13.73□□□□□ -0.21
TNPO3-203ENST00000471234 KIF21AQ7Z4S6 1674 aa13.7□□□□□ -0.22
TNPO3-203ENST00000471234 MRC2Q9UBG0 1479 aa13.69□□□□□ -0.22
TNPO3-203ENST00000471234 GAPVD1Q14C86 1478 aa13.69□□□□□ -0.22
TNPO3-203ENST00000471234 WDR62O43379 1518 aa13.67□□□□□ -0.22
TNPO3-203ENST00000471234 PRXQ9BXM0 1461 aa13.67□□□□□ -0.22
TNPO3-203ENST00000471234 THOC2Q8NI27 1593 aaKnown RBP13.66□□□□□ -0.22
TNPO3-203ENST00000471234 CCER1Q8TC90 406 aaPredicted RBP13.65□□□□□ -0.22
TNPO3-203ENST00000471234 ZNF608Q9ULD9 1512 aaPredicted RBP13.64□□□□□ -0.23
TNPO3-203ENST00000471234 KANK4Q5T7N3 995 aaPredicted RBP13.62□□□□□ -0.23
TNPO3-203ENST00000471234 ABCA10Q8WWZ4 1543 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms