RNA–Protein interactions for RNA: ENST00000530296.5

CTSB-217, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-217ENST00000530296 NISCHQ9Y2I1 1504 aa33.99■■■■□ 3.03
CTSB-217ENST00000530296 ABCC9O60706 1549 aa30.74■■■□□ 2.51
CTSB-217ENST00000530296 CCDC180Q9P1Z9 1646 aa30.67■■■□□ 2.5
CTSB-217ENST00000530296 RB1CC1Q8TDY2 1594 aa29.3■■■□□ 2.28
CTSB-217ENST00000530296 NACADO15069 1562 aa29.06■■■□□ 2.24
CTSB-217ENST00000530296 DNAJC5BQ9UF47 199 aa28.97■■■□□ 2.23
CTSB-217ENST00000530296 DCAF8L2P0C7V8 631 aa28.72■■■□□ 2.19
CTSB-217ENST00000530296 MYO15BQ96JP2 1530 aa28.66■■■□□ 2.18
CTSB-217ENST00000530296 PABPN1Q86U42 306 aaKnown RBP eCLIP28.55■■■□□ 2.16
CTSB-217ENST00000530296 UNC13AQ9UPW8 1703 aa28.52■■■□□ 2.16
CTSB-217ENST00000530296 BICRAQ9NZM4 1560 aa28.33■■■□□ 2.13
CTSB-217ENST00000530296 SHROOM4Q9ULL8 1493 aa28.17■■■□□ 2.1
CTSB-217ENST00000530296 DCAF1Q9Y4B6 1507 aa28.17■■■□□ 2.1
CTSB-217ENST00000530296 ZCCHC6Q5VYS8 1495 aaKnown RBP28.11■■■□□ 2.09
CTSB-217ENST00000530296 CC2D2AQ9P2K1 1620 aa27.8■■■□□ 2.04
CTSB-217ENST00000530296 CECR2Q9BXF3 1484 aa27.78■■■□□ 2.04
CTSB-217ENST00000530296 SCRIBQ14160 1630 aa27.78■■■□□ 2.04
CTSB-217ENST00000530296 EIF4G1Q04637 1599 aaKnown RBP27.71■■■□□ 2.03
CTSB-217ENST00000530296 DNAJC5Q9H3Z4 198 aa26.94■■□□□ 1.9
CTSB-217ENST00000530296 NCAPD3P42695 1498 aa26.81■■□□□ 1.88
CTSB-217ENST00000530296 CUX2O14529 1486 aa26.75■■□□□ 1.87
CTSB-217ENST00000530296 ERCC6Q03468 1493 aa26.66■■□□□ 1.86
CTSB-217ENST00000530296 ATAD2BQ9ULI0 1458 aa26.64■■□□□ 1.86
CTSB-217ENST00000530296 SMARCA2P51531 1590 aa26.63■■□□□ 1.85
CTSB-217ENST00000530296 HMGXB3Q12766 1538 aa26.6■■□□□ 1.85
CTSB-217ENST00000530296 SMARCA4P51532 1647 aa26.55■■□□□ 1.84
CTSB-217ENST00000530296 BAZ1AQ9NRL2 1556 aaPredicted RBP26.46■■□□□ 1.83
CTSB-217ENST00000530296 BAZ1BQ9UIG0 1483 aaKnown RBP26.39■■□□□ 1.82
CTSB-217ENST00000530296 PEG3Q9GZU2 1588 aa26.37■■□□□ 1.81
CTSB-217ENST00000530296 NESP48681 1621 aa26.3■■□□□ 1.8
CTSB-217ENST00000530296 LAMC3Q9Y6N6 1575 aa26.27■■□□□ 1.8
CTSB-217ENST00000530296 THOC2Q8NI27 1593 aaKnown RBP26.16■■□□□ 1.78
CTSB-217ENST00000530296 PDS5BQ9NTI5 1447 aa26.14■■□□□ 1.78
CTSB-217ENST00000530296 MROH2BQ7Z745 1585 aa26.12■■□□□ 1.77
CTSB-217ENST00000530296 KIF21AQ7Z4S6 1674 aa26■■□□□ 1.75
CTSB-217ENST00000530296 CADPSQ9ULU8 1353 aa25.97■■□□□ 1.75
CTSB-217ENST00000530296 MRC2Q9UBG0 1479 aa25.86■■□□□ 1.73
CTSB-217ENST00000530296 WDR62O43379 1518 aa25.79■■□□□ 1.72
CTSB-217ENST00000530296 WIZO95785 1651 aa25.77■■□□□ 1.72
CTSB-217ENST00000530296 CEP164Q9UPV0 1460 aa25.72■■□□□ 1.71
CTSB-217ENST00000530296 RSF1Q96T23 1441 aaPredicted RBP25.7■■□□□ 1.7
CTSB-217ENST00000530296 FANCD2Q9BXW9 1451 aa25.65■■□□□ 1.7
CTSB-217ENST00000530296 CFTRP13569 1480 aa25.62■■□□□ 1.69
CTSB-217ENST00000530296 TRIM41Q8WV44 630 aa25.57■■□□□ 1.68
CTSB-217ENST00000530296 TOP2AP11388 1531 aaKnown RBP25.53■■□□□ 1.68
CTSB-217ENST00000530296 OSCARQ8IYS5 282 aa25.48■■□□□ 1.67
CTSB-217ENST00000530296 URB2Q14146 1524 aaKnown RBP25.39■■□□□ 1.66
CTSB-217ENST00000530296 PRDM2Q13029 1718 aa25.36■■□□□ 1.65
CTSB-217ENST00000530296 IFT140Q96RY7 1462 aa25.24■■□□□ 1.63
CTSB-217ENST00000530296 ABCC8Q09428 1581 aa25.2■■□□□ 1.62
CTSB-217ENST00000530296 CCDC88BA6NC98 1476 aa25.19■■□□□ 1.62
CTSB-217ENST00000530296 SUPT5HO00267 1087 aaKnown RBP25.17■■□□□ 1.62
CTSB-217ENST00000530296 TOPBP1Q92547 1522 aa25.12■■□□□ 1.61
CTSB-217ENST00000530296 ZNF608Q9ULD9 1512 aaPredicted RBP25.08■■□□□ 1.61
CTSB-217ENST00000530296 RIMBP3CA6NJZ7 1639 aa25.07■■□□□ 1.6
CTSB-217ENST00000530296 RIMBP3BA6NNM3 1639 aa25.07■■□□□ 1.6
CTSB-217ENST00000530296 RIMBP3Q9UFD9 1639 aa25.07■■□□□ 1.6
CTSB-217ENST00000530296 DNMBPQ6XZF7 1577 aa25.04■■□□□ 1.6
CTSB-217ENST00000530296 ARHGEF11O15085 1522 aa24.99■■□□□ 1.59
CTSB-217ENST00000530296 EIF4G3O43432 1585 aaKnown RBP24.99■■□□□ 1.59
CTSB-217ENST00000530296 TARBP1Q13395 1621 aaKnown RBP24.9■■□□□ 1.58
CTSB-217ENST00000530296 AQRO60306 1485 aaKnown RBP eCLIP24.86■■□□□ 1.573e-7■■■■■ 33.7
CTSB-217ENST00000530296 POLA1P09884 1462 aaPredicted RBP24.84■■□□□ 1.57
CTSB-217ENST00000530296 CHD1O14646 1710 aa24.83■■□□□ 1.57
CTSB-217ENST00000530296 CYB5RLQ6IPT4 315 aa24.81■■□□□ 1.56
CTSB-217ENST00000530296 WDR97A6NE52 1622 aa24.8■■□□□ 1.56
CTSB-217ENST00000530296 FBLN2P98095 1184 aa24.78■■□□□ 1.56
CTSB-217ENST00000530296 SOGA1O94964 1423 aa24.76■■□□□ 1.55
CTSB-217ENST00000530296 ARAP1Q96P48 1450 aa24.7■■□□□ 1.54
CTSB-217ENST00000530296 RAD54L2Q9Y4B4 1467 aa24.69■■□□□ 1.54
CTSB-217ENST00000530296 TDRD9Q8NDG6 1382 aaKnown RBP24.67■■□□□ 1.54
CTSB-217ENST00000530296 MAGI1Q96QZ7 1491 aaPredicted RBP24.65■■□□□ 1.54
CTSB-217ENST00000530296 FGD5Q6ZNL6 1462 aa24.64■■□□□ 1.54
CTSB-217ENST00000530296 TRHP20396 242 aaPredicted RBP24.64■■□□□ 1.54
CTSB-217ENST00000530296 CHMP7Q8WUX9 453 aaPredicted RBP24.63■■□□□ 1.53
CTSB-217ENST00000530296 SNAPC4Q5SXM2 1469 aa24.63■■□□□ 1.53
CTSB-217ENST00000530296 SYNJ1O43426 1573 aa24.61■■□□□ 1.53
CTSB-217ENST00000530296 GRIN2BQ13224 1484 aa24.6■■□□□ 1.53
CTSB-217ENST00000530296 CLASP1Q7Z460 1538 aa24.57■■□□□ 1.52
CTSB-217ENST00000530296 CUX1P39880 1505 aa24.56■■□□□ 1.52
CTSB-217ENST00000530296 SYNJ2O15056 1496 aa24.54■■□□□ 1.52
CTSB-217ENST00000530296 GAPVD1Q14C86 1478 aa24.45■■□□□ 1.51
CTSB-217ENST00000530296 PBRM1Q86U86 1689 aa24.42■■□□□ 1.5
CTSB-217ENST00000530296 ABCA10Q8WWZ4 1543 aa24.4■■□□□ 1.5
CTSB-217ENST00000530296 ABCA5Q8WWZ7 1642 aa24.35■■□□□ 1.49
CTSB-217ENST00000530296 WRNQ14191 1432 aaPredicted RBP eCLIP24.3■■□□□ 1.48
CTSB-217ENST00000530296 GRIN2AQ12879 1464 aa24.26■■□□□ 1.47
CTSB-217ENST00000530296 NUP160Q12769 1436 aa24.18■■□□□ 1.46
CTSB-217ENST00000530296 TOP2BQ02880 1626 aa24.18■■□□□ 1.46
CTSB-217ENST00000530296 ADAMTS12P58397 1594 aa24.17■■□□□ 1.46
CTSB-217ENST00000530296 FHAD1B1AJZ9 1412 aa24.17■■□□□ 1.46
CTSB-217ENST00000530296 BIVM-ERCC5R4GMW8 1640 aa24.17■■□□□ 1.46
CTSB-217ENST00000530296 AEBP2Q6ZN18 517 aaPredicted RBP24.16■■□□□ 1.46
CTSB-217ENST00000530296 ERICH3Q5RHP9 1530 aa24.14■■□□□ 1.45
CTSB-217ENST00000530296 CEP170Q5SW79 1584 aa24.12■■□□□ 1.45
CTSB-217ENST00000530296 SHROOM2Q13796 1616 aa24.1■■□□□ 1.45
CTSB-217ENST00000530296 ERCC6L2Q5T890 1561 aa24.06■■□□□ 1.44
CTSB-217ENST00000530296 PRG4Q92954 1404 aaPredicted RBP23.95■■□□□ 1.42
CTSB-217ENST00000530296 JPH4Q96JJ6 628 aa23.95■■□□□ 1.42
CTSB-217ENST00000530296 NPM1P06748 294 aaKnown RBP eCLIP23.87■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms