RNA–Protein interactions for RNA: ENST00000540249.5

PDHA1-212, Transcript of pyruvate dehydrogenase E1 alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene PDHA1, Length 3,277 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDHA1-212ENST00000540249 NISCHQ9Y2I1 1504 aa26.45■■□□□ 1.82
PDHA1-212ENST00000540249 SHROOM4Q9ULL8 1493 aa23.74■■□□□ 1.39
PDHA1-212ENST00000540249 SUPT5HO00267 1087 aaKnown RBP23.48■■□□□ 1.35
PDHA1-212ENST00000540249 DCAF8L2P0C7V8 631 aa22.96■■□□□ 1.27
PDHA1-212ENST00000540249 PCGF6Q9BYE7 350 aa22.64■■□□□ 1.21
PDHA1-212ENST00000540249 CHIC1Q5VXU3 224 aa22.6■■□□□ 1.21
PDHA1-212ENST00000540249 MYO15BQ96JP2 1530 aa22.56■■□□□ 1.2
PDHA1-212ENST00000540249 HRCP23327 699 aa22.53■■□□□ 1.2
PDHA1-212ENST00000540249 PPARGC1BQ86YN6 1023 aaKnown RBP22.45■■□□□ 1.18
PDHA1-212ENST00000540249 ZCCHC6Q5VYS8 1495 aaKnown RBP22.35■■□□□ 1.17
PDHA1-212ENST00000540249 LOC105371045A0A1W2PR82 267 aa22.29■■□□□ 1.16
PDHA1-212ENST00000540249 EHMT2Q96KQ7 1210 aa21.98■■□□□ 1.11
PDHA1-212ENST00000540249 CCDC180Q9P1Z9 1646 aa21.9■■□□□ 1.1
PDHA1-212ENST00000540249 FAM9AQ8IZU1 332 aaPredicted RBP21.84■■□□□ 1.09
PDHA1-212ENST00000540249 TRIM26Q12899 539 aaPredicted RBP21.74■■□□□ 1.07
PDHA1-212ENST00000540249 DCAF1Q9Y4B6 1507 aa21.67■■□□□ 1.06
PDHA1-212ENST00000540249 TRIM41Q8WV44 630 aa21.59■■□□□ 1.05
PDHA1-212ENST00000540249 TTBK1Q5TCY1 1321 aaPredicted RBP21.29■■□□□ 1
PDHA1-212ENST00000540249 ZEB1P37275 1124 aaPredicted RBP21.28■■□□□ 1
PDHA1-212ENST00000540249 SCRIBQ14160 1630 aa21.26■□□□□ 0.99
PDHA1-212ENST00000540249 RSF1Q96T23 1441 aaPredicted RBP21.24■□□□□ 0.99
PDHA1-212ENST00000540249 SCAF1Q9H7N4 1312 aaKnown RBP21.17■□□□□ 0.98
PDHA1-212ENST00000540249 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.16■□□□□ 0.98
PDHA1-212ENST00000540249 ABCC9O60706 1549 aa21.13■□□□□ 0.97
PDHA1-212ENST00000540249 RB1CC1Q8TDY2 1594 aa21.11■□□□□ 0.97
PDHA1-212ENST00000540249 CCER1Q8TC90 406 aaPredicted RBP21.07■□□□□ 0.96
PDHA1-212ENST00000540249 CECR2Q9BXF3 1484 aa20.92■□□□□ 0.94
PDHA1-212ENST00000540249 NEUROD1Q13562 356 aa20.82■□□□□ 0.92
PDHA1-212ENST00000540249 PELP1Q8IZL8 1130 aaKnown RBP20.8■□□□□ 0.92
PDHA1-212ENST00000540249 MROH2BQ7Z745 1585 aa20.76■□□□□ 0.91
PDHA1-212ENST00000540249 DIEXFQ68CQ4 756 aaKnown RBP20.75■□□□□ 0.91
PDHA1-212ENST00000540249 ACIN1Q9UKV3 1341 aaKnown RBP20.73■□□□□ 0.91
PDHA1-212ENST00000540249 GTF3C3Q9Y5Q9 886 aa20.7■□□□□ 0.9
PDHA1-212ENST00000540249 YTHDC1Q96MU7 727 aaKnown RBP20.68■□□□□ 0.9
PDHA1-212ENST00000540249 WIZO95785 1651 aa20.67■□□□□ 0.9
PDHA1-212ENST00000540249 UBTFP17480 764 aaKnown RBP20.65■□□□□ 0.9
PDHA1-212ENST00000540249 RANGAP1P46060 587 aaPredicted RBP20.58■□□□□ 0.89
PDHA1-212ENST00000540249 CENPBP07199 599 aaPredicted RBP20.58■□□□□ 0.88
PDHA1-212ENST00000540249 HNRNPUL2Q1KMD3 747 aaKnown RBP20.52■□□□□ 0.88
PDHA1-212ENST00000540249 ABCC8Q09428 1581 aa20.52■□□□□ 0.87
PDHA1-212ENST00000540249 CCDC88BA6NC98 1476 aa20.48■□□□□ 0.87
PDHA1-212ENST00000540249 SOGA1O94964 1423 aa20.45■□□□□ 0.86
PDHA1-212ENST00000540249 CEP162Q5TB80 1403 aa20.43■□□□□ 0.86
PDHA1-212ENST00000540249 ZNF316A6NFI3 1004 aaPredicted RBP20.37■□□□□ 0.85
PDHA1-212ENST00000540249 CSRNP3Q8WYN3 585 aa20.37■□□□□ 0.85
PDHA1-212ENST00000540249 NACADO15069 1562 aa20.36■□□□□ 0.85
PDHA1-212ENST00000540249 RUSC2Q8N2Y8 1516 aa20.34■□□□□ 0.85
PDHA1-212ENST00000540249 PABPN1Q86U42 306 aaKnown RBP eCLIP20.31■□□□□ 0.842e-6■□□□□ 10.5
PDHA1-212ENST00000540249 MIER1Q8N108 512 aa20.3■□□□□ 0.84
PDHA1-212ENST00000540249 BAZ1AQ9NRL2 1556 aaPredicted RBP20.28■□□□□ 0.84
PDHA1-212ENST00000540249 TNIKQ9UKE5 1360 aa20.22■□□□□ 0.83
PDHA1-212ENST00000540249 APLP2Q06481 763 aa20.21■□□□□ 0.83
PDHA1-212ENST00000540249 WRNQ14191 1432 aaPredicted RBP eCLIP20.18■□□□□ 0.82
PDHA1-212ENST00000540249 EIF4G1Q04637 1599 aaKnown RBP20.15■□□□□ 0.82
PDHA1-212ENST00000540249 TOP2AP11388 1531 aaKnown RBP20.11■□□□□ 0.81
PDHA1-212ENST00000540249 SMARCA2P51531 1590 aa20.09■□□□□ 0.81
PDHA1-212ENST00000540249 GOLGA3Q08378 1498 aa20.04■□□□□ 0.8
PDHA1-212ENST00000540249 SMARCA4P51532 1647 aa20.03■□□□□ 0.8
PDHA1-212ENST00000540249 CLIP1P30622 1438 aa20■□□□□ 0.79
PDHA1-212ENST00000540249 ITGAEP38570 1179 aa19.98■□□□□ 0.79
PDHA1-212ENST00000540249 EEA1Q15075 1411 aa19.95■□□□□ 0.78
PDHA1-212ENST00000540249 CEP164Q9UPV0 1460 aa19.86■□□□□ 0.77
PDHA1-212ENST00000540249 RAPGEF2Q9Y4G8 1499 aa19.84■□□□□ 0.77
PDHA1-212ENST00000540249 VPS8Q8N3P4 1428 aa19.81■□□□□ 0.76
PDHA1-212ENST00000540249 KANK4Q5T7N3 995 aaPredicted RBP19.81■□□□□ 0.76
PDHA1-212ENST00000540249 SYNJ1O43426 1573 aa19.8■□□□□ 0.76
PDHA1-212ENST00000540249 MYT1Q01538 1121 aa19.73■□□□□ 0.75
PDHA1-212ENST00000540249 BCANQ96GW7 911 aa19.71■□□□□ 0.75
PDHA1-212ENST00000540249 UNC13AQ9UPW8 1703 aa19.71■□□□□ 0.75
PDHA1-212ENST00000540249 KCNH8Q96L42 1107 aa19.7■□□□□ 0.74
PDHA1-212ENST00000540249 SUPT16HQ9Y5B9 1047 aaKnown RBP19.7■□□□□ 0.74
PDHA1-212ENST00000540249 DHX57Q6P158 1386 aaKnown RBP19.67■□□□□ 0.74
PDHA1-212ENST00000540249 KIF21BO75037 1637 aa19.65■□□□□ 0.74
PDHA1-212ENST00000540249 ATP1B4Q9UN42 357 aaPredicted RBP19.64■□□□□ 0.73
PDHA1-212ENST00000540249 BAZ1BQ9UIG0 1483 aaKnown RBP19.6■□□□□ 0.73
PDHA1-212ENST00000540249 HIRIP3Q9BW71 556 aaPredicted RBP19.6■□□□□ 0.73
PDHA1-212ENST00000540249 ATAD2BQ9ULI0 1458 aa19.55■□□□□ 0.72
PDHA1-212ENST00000540249 DDX10Q13206 875 aaKnown RBP19.54■□□□□ 0.72
PDHA1-212ENST00000540249 P3H3Q8IVL6 736 aa19.52■□□□□ 0.72
PDHA1-212ENST00000540249 BICRAQ9NZM4 1560 aa19.52■□□□□ 0.72
PDHA1-212ENST00000540249 FAM50AQ14320 339 aaKnown RBP19.52■□□□□ 0.71
PDHA1-212ENST00000540249 SIN3AQ96ST3 1273 aa19.5■□□□□ 0.71
PDHA1-212ENST00000540249 ARAP1Q96P48 1450 aa19.47■□□□□ 0.71
PDHA1-212ENST00000540249 TSHZ2Q9NRE2 1034 aa19.47■□□□□ 0.71
PDHA1-212ENST00000540249 CLSPNQ9HAW4 1339 aa19.45■□□□□ 0.7
PDHA1-212ENST00000540249 FKBP8Q14318 412 aa19.45■□□□□ 0.7
PDHA1-212ENST00000540249 CCNB3Q8WWL7 1395 aa19.44■□□□□ 0.7
PDHA1-212ENST00000540249 TRIM52Q96A61 297 aa19.42■□□□□ 0.7
PDHA1-212ENST00000540249 RAB3GAP2Q9H2M9 1393 aa19.39■□□□□ 0.69
PDHA1-212ENST00000540249 PRXQ9BXM0 1461 aa19.34■□□□□ 0.69
PDHA1-212ENST00000540249 TOP2BQ02880 1626 aa19.34■□□□□ 0.69
PDHA1-212ENST00000540249 PEG3Q9GZU2 1588 aa19.33■□□□□ 0.68
PDHA1-212ENST00000540249 KIF27Q86VH2 1401 aa19.32■□□□□ 0.68
PDHA1-212ENST00000540249 RRBP1Q9P2E9 1410 aaKnown RBP19.3■□□□□ 0.68
PDHA1-212ENST00000540249 ARHGAP35Q9NRY4 1499 aa19.28■□□□□ 0.68
PDHA1-212ENST00000540249 NEFLP07196 543 aa19.27■□□□□ 0.68
PDHA1-212ENST00000540249 CUX1P39880 1505 aa19.24■□□□□ 0.67
PDHA1-212ENST00000540249 ANP32EQ9BTT0 268 aa19.22■□□□□ 0.67
PDHA1-212ENST00000540249 ERICH3Q5RHP9 1530 aa19.22■□□□□ 0.67
PDHA1-212ENST00000540249 IRX6P78412 446 aaPredicted RBP19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms