RNA–Protein interactions for RNA: ENST00000545074.5

PDHA1-213, Transcript of pyruvate dehydrogenase E1 alpha 1 subunit, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene PDHA1, Length 3,391 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDHA1-213ENST00000545074 NISCHQ9Y2I1 1504 aa25.21■■□□□ 1.63
PDHA1-213ENST00000545074 SHROOM4Q9ULL8 1493 aa22.51■■□□□ 1.19
PDHA1-213ENST00000545074 SUPT5HO00267 1087 aaKnown RBP22.19■■□□□ 1.14
PDHA1-213ENST00000545074 DCAF8L2P0C7V8 631 aa22.19■■□□□ 1.14
PDHA1-213ENST00000545074 ZCCHC6Q5VYS8 1495 aaKnown RBP21.22■□□□□ 0.99
PDHA1-213ENST00000545074 CHIC1Q5VXU3 224 aa21.13■□□□□ 0.97
PDHA1-213ENST00000545074 CCDC180Q9P1Z9 1646 aa20.98■□□□□ 0.95
PDHA1-213ENST00000545074 PCGF6Q9BYE7 350 aa20.96■□□□□ 0.95
PDHA1-213ENST00000545074 MYO15BQ96JP2 1530 aa20.89■□□□□ 0.94
PDHA1-213ENST00000545074 LOC105371045A0A1W2PR82 267 aa20.86■□□□□ 0.93
PDHA1-213ENST00000545074 EHMT2Q96KQ7 1210 aa20.82■□□□□ 0.92
PDHA1-213ENST00000545074 FAM9AQ8IZU1 332 aaPredicted RBP20.66■□□□□ 0.9
PDHA1-213ENST00000545074 HRCP23327 699 aa20.59■□□□□ 0.89
PDHA1-213ENST00000545074 PPARGC1BQ86YN6 1023 aaKnown RBP20.57■□□□□ 0.88
PDHA1-213ENST00000545074 TRIM41Q8WV44 630 aa20.44■□□□□ 0.86
PDHA1-213ENST00000545074 SCRIBQ14160 1630 aa20.35■□□□□ 0.85
PDHA1-213ENST00000545074 ABCC9O60706 1549 aa20.32■□□□□ 0.84
PDHA1-213ENST00000545074 DCAF1Q9Y4B6 1507 aa20.26■□□□□ 0.83
PDHA1-213ENST00000545074 TRIM26Q12899 539 aaPredicted RBP20.17■□□□□ 0.82
PDHA1-213ENST00000545074 RSF1Q96T23 1441 aaPredicted RBP20.15■□□□□ 0.82
PDHA1-213ENST00000545074 TTBK1Q5TCY1 1321 aaPredicted RBP20.09■□□□□ 0.81
PDHA1-213ENST00000545074 CECR2Q9BXF3 1484 aa19.96■□□□□ 0.79
PDHA1-213ENST00000545074 RB1CC1Q8TDY2 1594 aa19.93■□□□□ 0.78
PDHA1-213ENST00000545074 MROH2BQ7Z745 1585 aa19.76■□□□□ 0.75
PDHA1-213ENST00000545074 PABPN1Q86U42 306 aaKnown RBP eCLIP19.76■□□□□ 0.752e-6■□□□□ 10.5
PDHA1-213ENST00000545074 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.7■□□□□ 0.74
PDHA1-213ENST00000545074 ZEB1P37275 1124 aaPredicted RBP19.65■□□□□ 0.74
PDHA1-213ENST00000545074 CCER1Q8TC90 406 aaPredicted RBP19.64■□□□□ 0.74
PDHA1-213ENST00000545074 WIZO95785 1651 aa19.64■□□□□ 0.74
PDHA1-213ENST00000545074 RANGAP1P46060 587 aaPredicted RBP19.64■□□□□ 0.73
PDHA1-213ENST00000545074 UBTFP17480 764 aaKnown RBP19.62■□□□□ 0.73
PDHA1-213ENST00000545074 NACADO15069 1562 aa19.62■□□□□ 0.73
PDHA1-213ENST00000545074 ABCC8Q09428 1581 aa19.42■□□□□ 0.7
PDHA1-213ENST00000545074 CCDC88BA6NC98 1476 aa19.35■□□□□ 0.69
PDHA1-213ENST00000545074 BAZ1AQ9NRL2 1556 aaPredicted RBP19.34■□□□□ 0.69
PDHA1-213ENST00000545074 SOGA1O94964 1423 aa19.32■□□□□ 0.68
PDHA1-213ENST00000545074 CSRNP3Q8WYN3 585 aa19.32■□□□□ 0.68
PDHA1-213ENST00000545074 HNRNPUL2Q1KMD3 747 aaKnown RBP19.3■□□□□ 0.68
PDHA1-213ENST00000545074 RUSC2Q8N2Y8 1516 aa19.21■□□□□ 0.67
PDHA1-213ENST00000545074 CEP162Q5TB80 1403 aa19.2■□□□□ 0.66
PDHA1-213ENST00000545074 APLP2Q06481 763 aa19.19■□□□□ 0.66
PDHA1-213ENST00000545074 DIEXFQ68CQ4 756 aaKnown RBP19.15■□□□□ 0.66
PDHA1-213ENST00000545074 SCAF1Q9H7N4 1312 aaKnown RBP19.14■□□□□ 0.66
PDHA1-213ENST00000545074 SMARCA4P51532 1647 aa19.14■□□□□ 0.65
PDHA1-213ENST00000545074 TOP2AP11388 1531 aaKnown RBP19.13■□□□□ 0.65
PDHA1-213ENST00000545074 YTHDC1Q96MU7 727 aaKnown RBP19.12■□□□□ 0.65
PDHA1-213ENST00000545074 SMARCA2P51531 1590 aa19.08■□□□□ 0.64
PDHA1-213ENST00000545074 WRNQ14191 1432 aaPredicted RBP eCLIP19.03■□□□□ 0.64
PDHA1-213ENST00000545074 TNIKQ9UKE5 1360 aa19.02■□□□□ 0.64
PDHA1-213ENST00000545074 NEUROD1Q13562 356 aa18.99■□□□□ 0.63
PDHA1-213ENST00000545074 ITGAEP38570 1179 aa18.94■□□□□ 0.62
PDHA1-213ENST00000545074 UNC13AQ9UPW8 1703 aa18.93■□□□□ 0.62
PDHA1-213ENST00000545074 EIF4G1Q04637 1599 aaKnown RBP18.92■□□□□ 0.62
PDHA1-213ENST00000545074 GOLGA3Q08378 1498 aa18.91■□□□□ 0.62
PDHA1-213ENST00000545074 CENPBP07199 599 aaPredicted RBP18.9■□□□□ 0.62
PDHA1-213ENST00000545074 ACIN1Q9UKV3 1341 aaKnown RBP18.89■□□□□ 0.61
PDHA1-213ENST00000545074 GTF3C3Q9Y5Q9 886 aa18.89■□□□□ 0.61
PDHA1-213ENST00000545074 CLIP1P30622 1438 aa18.88■□□□□ 0.61
PDHA1-213ENST00000545074 ZNF316A6NFI3 1004 aaPredicted RBP18.86■□□□□ 0.61
PDHA1-213ENST00000545074 BAZ1BQ9UIG0 1483 aaKnown RBP18.86■□□□□ 0.61
PDHA1-213ENST00000545074 EEA1Q15075 1411 aa18.85■□□□□ 0.61
PDHA1-213ENST00000545074 ATP1B4Q9UN42 357 aaPredicted RBP18.82■□□□□ 0.6
PDHA1-213ENST00000545074 BICRAQ9NZM4 1560 aa18.8■□□□□ 0.6
PDHA1-213ENST00000545074 ATAD2BQ9ULI0 1458 aa18.78■□□□□ 0.6
PDHA1-213ENST00000545074 CEP164Q9UPV0 1460 aa18.76■□□□□ 0.59
PDHA1-213ENST00000545074 RAPGEF2Q9Y4G8 1499 aa18.76■□□□□ 0.59
PDHA1-213ENST00000545074 SYNJ1O43426 1573 aa18.76■□□□□ 0.59
PDHA1-213ENST00000545074 MIER1Q8N108 512 aa18.73■□□□□ 0.59
PDHA1-213ENST00000545074 KANK4Q5T7N3 995 aaPredicted RBP18.67■□□□□ 0.58
PDHA1-213ENST00000545074 P3H3Q8IVL6 736 aa18.67■□□□□ 0.58
PDHA1-213ENST00000545074 VPS8Q8N3P4 1428 aa18.63■□□□□ 0.57
PDHA1-213ENST00000545074 PELP1Q8IZL8 1130 aaKnown RBP18.55■□□□□ 0.56
PDHA1-213ENST00000545074 FAM50AQ14320 339 aaKnown RBP18.52■□□□□ 0.56
PDHA1-213ENST00000545074 KIF21BO75037 1637 aa18.48■□□□□ 0.55
PDHA1-213ENST00000545074 PEG3Q9GZU2 1588 aa18.45■□□□□ 0.54
PDHA1-213ENST00000545074 KIF27Q86VH2 1401 aa18.44■□□□□ 0.54
PDHA1-213ENST00000545074 HIRIP3Q9BW71 556 aaPredicted RBP18.37■□□□□ 0.53
PDHA1-213ENST00000545074 ARAP1Q96P48 1450 aa18.37■□□□□ 0.53
PDHA1-213ENST00000545074 TOP2BQ02880 1626 aa18.36■□□□□ 0.53
PDHA1-213ENST00000545074 CUX2O14529 1486 aa18.36■□□□□ 0.53
PDHA1-213ENST00000545074 DHX57Q6P158 1386 aaKnown RBP18.33■□□□□ 0.53
PDHA1-213ENST00000545074 CUX1P39880 1505 aa18.33■□□□□ 0.53
PDHA1-213ENST00000545074 PRXQ9BXM0 1461 aa18.31■□□□□ 0.52
PDHA1-213ENST00000545074 SIN3AQ96ST3 1273 aa18.3■□□□□ 0.52
PDHA1-213ENST00000545074 CCNB3Q8WWL7 1395 aa18.29■□□□□ 0.52
PDHA1-213ENST00000545074 NCAPD3P42695 1498 aa18.27■□□□□ 0.52
PDHA1-213ENST00000545074 ARID3CA6NKF2 412 aa18.26■□□□□ 0.51
PDHA1-213ENST00000545074 CARMIL1Q5VZK9 1371 aa18.26■□□□□ 0.51
PDHA1-213ENST00000545074 DDX10Q13206 875 aaKnown RBP18.24■□□□□ 0.51
PDHA1-213ENST00000545074 IGF1RP08069 1367 aa18.23■□□□□ 0.51
PDHA1-213ENST00000545074 KCNH8Q96L42 1107 aa18.22■□□□□ 0.51
PDHA1-213ENST00000545074 ARHGAP35Q9NRY4 1499 aa18.21■□□□□ 0.51
PDHA1-213ENST00000545074 CFTRP13569 1480 aa18.19■□□□□ 0.5
PDHA1-213ENST00000545074 RAB3GAP2Q9H2M9 1393 aa18.19■□□□□ 0.5
PDHA1-213ENST00000545074 BCANQ96GW7 911 aa18.18■□□□□ 0.5
PDHA1-213ENST00000545074 CADPSQ9ULU8 1353 aa18.17■□□□□ 0.5
PDHA1-213ENST00000545074 ERICH3Q5RHP9 1530 aa18.16■□□□□ 0.5
PDHA1-213ENST00000545074 BIVM-ERCC5R4GMW8 1640 aa18.14■□□□□ 0.49
PDHA1-213ENST00000545074 CLSPNQ9HAW4 1339 aa18.13■□□□□ 0.49
PDHA1-213ENST00000545074 FGD5Q6ZNL6 1462 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms