RNA–Protein interactions for RNA: ENST00000627585.2

TNPO3-205, Transcript of transportin 3, humanhuman

TSL 2 BASIC

Gene TNPO3, Length 4,514 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO3-205ENST00000627585 NISCHQ9Y2I1 1504 aa18.3■□□□□ 0.52
TNPO3-205ENST00000627585 DCAF8L2P0C7V8 631 aa16.78■□□□□ 0.28
TNPO3-205ENST00000627585 SHROOM4Q9ULL8 1493 aa15.91■□□□□ 0.14
TNPO3-205ENST00000627585 ABCC9O60706 1549 aa15.68■□□□□ 0.1
TNPO3-205ENST00000627585 CCDC180Q9P1Z9 1646 aa15.64■□□□□ 0.09
TNPO3-205ENST00000627585 SUPT5HO00267 1087 aaKnown RBP15.61■□□□□ 0.09
TNPO3-205ENST00000627585 ZCCHC6Q5VYS8 1495 aaKnown RBP15.22■□□□□ 0.03
TNPO3-205ENST00000627585 PABPN1Q86U42 306 aaKnown RBP eCLIP15.08■□□□□ 03e-6■■□□□ 12.4
TNPO3-205ENST00000627585 RB1CC1Q8TDY2 1594 aa14.95□□□□□ -0.02
TNPO3-205ENST00000627585 SCRIBQ14160 1630 aa14.93□□□□□ -0.02
TNPO3-205ENST00000627585 NACADO15069 1562 aa14.91□□□□□ -0.02
TNPO3-205ENST00000627585 DCAF1Q9Y4B6 1507 aa14.81□□□□□ -0.04
TNPO3-205ENST00000627585 EHMT2Q96KQ7 1210 aa14.61□□□□□ -0.07
TNPO3-205ENST00000627585 MYO15BQ96JP2 1530 aa14.61□□□□□ -0.07
TNPO3-205ENST00000627585 TRIM41Q8WV44 630 aa14.6□□□□□ -0.07
TNPO3-205ENST00000627585 FAM9AQ8IZU1 332 aaPredicted RBP14.56□□□□□ -0.08
TNPO3-205ENST00000627585 RSF1Q96T23 1441 aaPredicted RBP14.31□□□□□ -0.12
TNPO3-205ENST00000627585 CHIC1Q5VXU3 224 aa14.31□□□□□ -0.12
TNPO3-205ENST00000627585 CECR2Q9BXF3 1484 aa14.3□□□□□ -0.12
TNPO3-205ENST00000627585 BAZ1AQ9NRL2 1556 aaPredicted RBP14.28□□□□□ -0.12
TNPO3-205ENST00000627585 UBTFP17480 764 aaKnown RBP14.22□□□□□ -0.13
TNPO3-205ENST00000627585 RANGAP1P46060 587 aaPredicted RBP14.22□□□□□ -0.13
TNPO3-205ENST00000627585 BAZ1BQ9UIG0 1483 aaKnown RBP14.19□□□□□ -0.14
TNPO3-205ENST00000627585 APLP2Q06481 763 aa14.18□□□□□ -0.14
TNPO3-205ENST00000627585 MROH2BQ7Z745 1585 aa14.14□□□□□ -0.15
TNPO3-205ENST00000627585 SMARCA2P51531 1590 aa14.04□□□□□ -0.16
TNPO3-205ENST00000627585 ATP1B4Q9UN42 357 aaPredicted RBP14.01□□□□□ -0.17
TNPO3-205ENST00000627585 SMARCA4P51532 1647 aa14□□□□□ -0.17
TNPO3-205ENST00000627585 LOC105371045A0A1W2PR82 267 aa13.98□□□□□ -0.17
TNPO3-205ENST00000627585 TTBK1Q5TCY1 1321 aaPredicted RBP13.98□□□□□ -0.17
TNPO3-205ENST00000627585 WIZO95785 1651 aa13.97□□□□□ -0.17
TNPO3-205ENST00000627585 ATAD2BQ9ULI0 1458 aa13.95□□□□□ -0.18
TNPO3-205ENST00000627585 BICRAQ9NZM4 1560 aa13.9□□□□□ -0.18
TNPO3-205ENST00000627585 EIF4G1Q04637 1599 aaKnown RBP13.89□□□□□ -0.19
TNPO3-205ENST00000627585 TOP2AP11388 1531 aaKnown RBP13.89□□□□□ -0.19
TNPO3-205ENST00000627585 CCDC88BA6NC98 1476 aa13.88□□□□□ -0.19
TNPO3-205ENST00000627585 FBLN2P98095 1184 aa13.85□□□□□ -0.19
TNPO3-205ENST00000627585 CSRNP3Q8WYN3 585 aa13.84□□□□□ -0.19
TNPO3-205ENST00000627585 UNC13AQ9UPW8 1703 aa13.83□□□□□ -0.2
TNPO3-205ENST00000627585 WRNQ14191 1432 aaPredicted RBP eCLIP13.81□□□□□ -0.23e-7■■■■■ 36.2
TNPO3-205ENST00000627585 ERCC6Q03468 1493 aa13.8□□□□□ -0.2
TNPO3-205ENST00000627585 NCAPD3P42695 1498 aa13.77□□□□□ -0.21
TNPO3-205ENST00000627585 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.74□□□□□ -0.21
TNPO3-205ENST00000627585 HNRNPUL2Q1KMD3 747 aaKnown RBP13.74□□□□□ -0.21
TNPO3-205ENST00000627585 PPARGC1BQ86YN6 1023 aaKnown RBP13.74□□□□□ -0.21
TNPO3-205ENST00000627585 CADPSQ9ULU8 1353 aa13.73□□□□□ -0.21
TNPO3-205ENST00000627585 PCGF6Q9BYE7 350 aa13.72□□□□□ -0.21
TNPO3-205ENST00000627585 PDS5BQ9NTI5 1447 aa13.72□□□□□ -0.21
TNPO3-205ENST00000627585 CC2D2AQ9P2K1 1620 aa13.71□□□□□ -0.21
TNPO3-205ENST00000627585 ABCC8Q09428 1581 aa13.62□□□□□ -0.23
TNPO3-205ENST00000627585 HMGXB3Q12766 1538 aa13.61□□□□□ -0.23
TNPO3-205ENST00000627585 EEA1Q15075 1411 aa13.6□□□□□ -0.23
TNPO3-205ENST00000627585 KIF27Q86VH2 1401 aa13.6□□□□□ -0.23
TNPO3-205ENST00000627585 P3H3Q8IVL6 736 aa13.6□□□□□ -0.23
TNPO3-205ENST00000627585 CHMP7Q8WUX9 453 aaPredicted RBP13.59□□□□□ -0.23
TNPO3-205ENST00000627585 CEP164Q9UPV0 1460 aa13.56□□□□□ -0.24
TNPO3-205ENST00000627585 DNAJC5BQ9UF47 199 aa13.56□□□□□ -0.24
TNPO3-205ENST00000627585 FANCD2Q9BXW9 1451 aa13.56□□□□□ -0.24
TNPO3-205ENST00000627585 CUX2O14529 1486 aa13.53□□□□□ -0.24
TNPO3-205ENST00000627585 TRIM26Q12899 539 aaPredicted RBP13.51□□□□□ -0.25
TNPO3-205ENST00000627585 SOGA1O94964 1423 aa13.5□□□□□ -0.25
TNPO3-205ENST00000627585 ITGAEP38570 1179 aa13.49□□□□□ -0.25
TNPO3-205ENST00000627585 PEG3Q9GZU2 1588 aa13.47□□□□□ -0.25
TNPO3-205ENST00000627585 GOLGA3Q08378 1498 aa13.46□□□□□ -0.25
TNPO3-205ENST00000627585 ZEB1P37275 1124 aaPredicted RBP13.46□□□□□ -0.25
TNPO3-205ENST00000627585 CFTRP13569 1480 aa13.46□□□□□ -0.25
TNPO3-205ENST00000627585 ARID3CA6NKF2 412 aa13.45□□□□□ -0.26
TNPO3-205ENST00000627585 HRCP23327 699 aa13.45□□□□□ -0.26
TNPO3-205ENST00000627585 NESP48681 1621 aa13.45□□□□□ -0.26
TNPO3-205ENST00000627585 TDRD9Q8NDG6 1382 aaKnown RBP13.45□□□□□ -0.26
TNPO3-205ENST00000627585 CCER1Q8TC90 406 aaPredicted RBP13.43□□□□□ -0.26
TNPO3-205ENST00000627585 MYT1LQ9UL68 1186 aa13.43□□□□□ -0.26
TNPO3-205ENST00000627585 CARMIL1Q5VZK9 1371 aa13.41□□□□□ -0.26
TNPO3-205ENST00000627585 CLIP1P30622 1438 aa13.39□□□□□ -0.27
TNPO3-205ENST00000627585 FAM50AQ14320 339 aaKnown RBP13.37□□□□□ -0.27
TNPO3-205ENST00000627585 CDK11AQ9UQ88 783 aaPredicted RBP13.36□□□□□ -0.27
TNPO3-205ENST00000627585 FGD5Q6ZNL6 1462 aa13.34□□□□□ -0.27
TNPO3-205ENST00000627585 TNIKQ9UKE5 1360 aa13.34□□□□□ -0.27
TNPO3-205ENST00000627585 CEP162Q5TB80 1403 aa13.33□□□□□ -0.28
TNPO3-205ENST00000627585 NPM1P06748 294 aaKnown RBP eCLIP13.31□□□□□ -0.28
TNPO3-205ENST00000627585 LAMC3Q9Y6N6 1575 aa13.31□□□□□ -0.28
TNPO3-205ENST00000627585 RAD54L2Q9Y4B4 1467 aa13.28□□□□□ -0.28
TNPO3-205ENST00000627585 MRC2Q9UBG0 1479 aa13.27□□□□□ -0.28
TNPO3-205ENST00000627585 RUSC2Q8N2Y8 1516 aa13.26□□□□□ -0.29
TNPO3-205ENST00000627585 SYNJ1O43426 1573 aa13.24□□□□□ -0.29
TNPO3-205ENST00000627585 TOPBP1Q92547 1522 aa13.23□□□□□ -0.29
TNPO3-205ENST00000627585 RAPGEF2Q9Y4G8 1499 aa13.23□□□□□ -0.29
TNPO3-205ENST00000627585 GAPVD1Q14C86 1478 aa13.22□□□□□ -0.29
TNPO3-205ENST00000627585 ZNF777Q9ULD5 760 aaPredicted RBP13.21□□□□□ -0.29
TNPO3-205ENST00000627585 CUX1P39880 1505 aa13.21□□□□□ -0.29
TNPO3-205ENST00000627585 MTUS2Q5JR59 1369 aa13.2□□□□□ -0.3
TNPO3-205ENST00000627585 TOP2BQ02880 1626 aa13.19□□□□□ -0.3
TNPO3-205ENST00000627585 DNMBPQ6XZF7 1577 aa13.18□□□□□ -0.3
TNPO3-205ENST00000627585 AQRO60306 1485 aaKnown RBP eCLIP13.18□□□□□ -0.34e-7■■■■□ 25.8
TNPO3-205ENST00000627585 POLA1P09884 1462 aaPredicted RBP13.17□□□□□ -0.3
TNPO3-205ENST00000627585 IGF1RP08069 1367 aa13.17□□□□□ -0.3
TNPO3-205ENST00000627585 IFT140Q96RY7 1462 aa13.14□□□□□ -0.31
TNPO3-205ENST00000627585 PLEKHD1A6NEE1 506 aa13.14□□□□□ -0.31
TNPO3-205ENST00000627585 CARMIL2Q6F5E8 1435 aa13.13□□□□□ -0.31
TNPO3-205ENST00000627585 TRIM52Q96A61 297 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms