Protein–RNA interactions for Protein: O95170

CDRT1, CMT1A duplicated region transcript 1 protein, humanhuman

Predictions only

Length 752 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1O95170 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
CDRT1O95170 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CDRT1O95170 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDRT1O95170 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDRT1O95170 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDRT1O95170 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDRT1O95170 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CDRT1O95170 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDRT1O95170 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
CDRT1O95170 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDRT1O95170 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDRT1O95170 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC16.88■□□□□ 0.29
CDRT1O95170 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC16.88■□□□□ 0.29
CDRT1O95170 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDRT1O95170 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDRT1O95170 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDRT1O95170 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDRT1O95170 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC16.88■□□□□ 0.29
CDRT1O95170 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDRT1O95170 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDRT1O95170 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDRT1O95170 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC16.88■□□□□ 0.29
CDRT1O95170 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC16.88■□□□□ 0.29
CDRT1O95170 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
CDRT1O95170 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC16.88■□□□□ 0.29
CDRT1O95170 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC16.88■□□□□ 0.29
CDRT1O95170 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC16.88■□□□□ 0.29
CDRT1O95170 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC16.88■□□□□ 0.29
CDRT1O95170 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC16.88■□□□□ 0.29
CDRT1O95170 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC16.88■□□□□ 0.29
CDRT1O95170 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CDRT1O95170 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDRT1O95170 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
CDRT1O95170 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC16.88■□□□□ 0.29
CDRT1O95170 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC16.88■□□□□ 0.29
CDRT1O95170 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC16.88■□□□□ 0.29
CDRT1O95170 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CDRT1O95170 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
CDRT1O95170 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDRT1O95170 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC16.87■□□□□ 0.29
CDRT1O95170 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
CDRT1O95170 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDRT1O95170 PRORSD1P-202ENST00000563365 2154 ntBASIC16.87■□□□□ 0.29
CDRT1O95170 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
CDRT1O95170 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDRT1O95170 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDRT1O95170 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDRT1O95170 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDRT1O95170 BET1L-204ENST00000410108 637 ntTSL 3 BASIC16.87■□□□□ 0.29
CDRT1O95170 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDRT1O95170 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC16.87■□□□□ 0.29
CDRT1O95170 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC16.87■□□□□ 0.29
CDRT1O95170 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CDRT1O95170 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC16.87■□□□□ 0.29
CDRT1O95170 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC16.87■□□□□ 0.29
CDRT1O95170 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC16.87■□□□□ 0.29
CDRT1O95170 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDRT1O95170 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CDRT1O95170 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC16.87■□□□□ 0.29
CDRT1O95170 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC16.87■□□□□ 0.29
CDRT1O95170 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDRT1O95170 SDHAP1-207ENST00000440850 2000 ntBASIC16.87■□□□□ 0.29
CDRT1O95170 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
CDRT1O95170 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC16.87■□□□□ 0.29
CDRT1O95170 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDRT1O95170 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CDRT1O95170 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC16.87■□□□□ 0.29
CDRT1O95170 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC16.87■□□□□ 0.29
CDRT1O95170 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC16.87■□□□□ 0.29
CDRT1O95170 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDRT1O95170 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDRT1O95170 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
CDRT1O95170 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDRT1O95170 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDRT1O95170 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC16.86■□□□□ 0.29
CDRT1O95170 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDRT1O95170 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
CDRT1O95170 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC16.86■□□□□ 0.29
CDRT1O95170 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CDRT1O95170 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDRT1O95170 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC16.86■□□□□ 0.29
CDRT1O95170 ESPNP-201ENST00000270691 2015 ntBASIC16.86■□□□□ 0.29
CDRT1O95170 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CDRT1O95170 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC16.86■□□□□ 0.29
CDRT1O95170 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
CDRT1O95170 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC16.86■□□□□ 0.29
CDRT1O95170 AC006015.1-201ENST00000429970 570 ntBASIC16.86■□□□□ 0.29
CDRT1O95170 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC16.86■□□□□ 0.29
CDRT1O95170 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC16.86■□□□□ 0.29
CDRT1O95170 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDRT1O95170 BRWD1-AS2-201ENST00000603064 1028 ntBASIC16.86■□□□□ 0.29
CDRT1O95170 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CDRT1O95170 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC16.86■□□□□ 0.29
CDRT1O95170 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
CDRT1O95170 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDRT1O95170 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDRT1O95170 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC16.86■□□□□ 0.29
CDRT1O95170 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CDRT1O95170 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
CDRT1O95170 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms