RNA–Protein interactions for RNA: ENST00000440264.5

CCNA1-202, Transcript of cyclin A1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCNA1, Length 1,758 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1-202ENST00000440264 NISCHQ9Y2I1 1504 aa42.27■■■■■ 4.36
CCNA1-202ENST00000440264 CCDC180Q9P1Z9 1646 aa36.72■■■■□ 3.47
CCNA1-202ENST00000440264 ZCCHC6Q5VYS8 1495 aaKnown RBP35.59■■■■□ 3.29
CCNA1-202ENST00000440264 DCAF1Q9Y4B6 1507 aa34.98■■■■□ 3.19
CCNA1-202ENST00000440264 SHROOM4Q9ULL8 1493 aa34.54■■■■□ 3.12
CCNA1-202ENST00000440264 DCAF8L2P0C7V8 631 aa34.53■■■■□ 3.12
CCNA1-202ENST00000440264 MYO15BQ96JP2 1530 aa34.46■■■■□ 3.11
CCNA1-202ENST00000440264 ABCC9O60706 1549 aa34.41■■■■□ 3.1
CCNA1-202ENST00000440264 NACADO15069 1562 aa34.1■■■■□ 3.05
CCNA1-202ENST00000440264 SCRIBQ14160 1630 aa33.77■■■■□ 3
CCNA1-202ENST00000440264 RB1CC1Q8TDY2 1594 aa33.7■■■□□ 2.99
CCNA1-202ENST00000440264 SUPT5HO00267 1087 aaKnown RBP33.3■■■□□ 2.92
CCNA1-202ENST00000440264 UNC13AQ9UPW8 1703 aa33.2■■■□□ 2.91
CCNA1-202ENST00000440264 RSF1Q96T23 1441 aaPredicted RBP32.9■■■□□ 2.86
CCNA1-202ENST00000440264 BICRAQ9NZM4 1560 aa32.85■■■□□ 2.85
CCNA1-202ENST00000440264 CECR2Q9BXF3 1484 aa32.85■■■□□ 2.85
CCNA1-202ENST00000440264 MROH2BQ7Z745 1585 aa32.69■■■□□ 2.82
CCNA1-202ENST00000440264 BAZ1AQ9NRL2 1556 aaPredicted RBP32.56■■■□□ 2.8
CCNA1-202ENST00000440264 PABPN1Q86U42 306 aaKnown RBP eCLIP32.47■■■□□ 2.79
CCNA1-202ENST00000440264 SMARCA4P51532 1647 aa32.44■■■□□ 2.78
CCNA1-202ENST00000440264 WIZO95785 1651 aa32.42■■■□□ 2.78
CCNA1-202ENST00000440264 CHIC1Q5VXU3 224 aa32.15■■■□□ 2.74
CCNA1-202ENST00000440264 PEG3Q9GZU2 1588 aa32.09■■■□□ 2.73
CCNA1-202ENST00000440264 TOP2AP11388 1531 aaKnown RBP32.07■■■□□ 2.72
CCNA1-202ENST00000440264 ATAD2BQ9ULI0 1458 aa31.82■■■□□ 2.68
CCNA1-202ENST00000440264 SMARCA2P51531 1590 aa31.82■■■□□ 2.68
CCNA1-202ENST00000440264 EIF4G1Q04637 1599 aaKnown RBP31.78■■■□□ 2.68
CCNA1-202ENST00000440264 CCDC88BA6NC98 1476 aa31.75■■■□□ 2.67
CCNA1-202ENST00000440264 BAZ1BQ9UIG0 1483 aaKnown RBP31.58■■■□□ 2.65
CCNA1-202ENST00000440264 NCAPD3P42695 1498 aa31.51■■■□□ 2.63
CCNA1-202ENST00000440264 HMGXB3Q12766 1538 aa31.49■■■□□ 2.63
CCNA1-202ENST00000440264 TRIM41Q8WV44 630 aa31.28■■■□□ 2.6
CCNA1-202ENST00000440264 CC2D2AQ9P2K1 1620 aa31.2■■■□□ 2.59
CCNA1-202ENST00000440264 ABCC8Q09428 1581 aa31.17■■■□□ 2.58
CCNA1-202ENST00000440264 LOC105371045A0A1W2PR82 267 aa30.9■■■□□ 2.54
CCNA1-202ENST00000440264 CFTRP13569 1480 aa30.88■■■□□ 2.53
CCNA1-202ENST00000440264 WRNQ14191 1432 aaPredicted RBP eCLIP30.88■■■□□ 2.53
CCNA1-202ENST00000440264 SYNJ1O43426 1573 aa30.84■■■□□ 2.53
CCNA1-202ENST00000440264 PRDM2Q13029 1718 aa30.77■■■□□ 2.52
CCNA1-202ENST00000440264 FAM9AQ8IZU1 332 aaPredicted RBP30.71■■■□□ 2.51
CCNA1-202ENST00000440264 CADPSQ9ULU8 1353 aa30.67■■■□□ 2.5
CCNA1-202ENST00000440264 TOP2BQ02880 1626 aa30.67■■■□□ 2.5
CCNA1-202ENST00000440264 BIVM-ERCC5R4GMW8 1640 aa30.65■■■□□ 2.5
CCNA1-202ENST00000440264 SOGA1O94964 1423 aa30.64■■■□□ 2.5
CCNA1-202ENST00000440264 RUSC2Q8N2Y8 1516 aa30.55■■■□□ 2.48
CCNA1-202ENST00000440264 EEA1Q15075 1411 aa30.55■■■□□ 2.48
CCNA1-202ENST00000440264 CUX1P39880 1505 aa30.54■■■□□ 2.48
CCNA1-202ENST00000440264 DNAJC5BQ9UF47 199 aa30.42■■■□□ 2.46
CCNA1-202ENST00000440264 NESP48681 1621 aa30.36■■■□□ 2.45
CCNA1-202ENST00000440264 LAMC3Q9Y6N6 1575 aa30.35■■■□□ 2.45
CCNA1-202ENST00000440264 CSRNP3Q8WYN3 585 aa30.34■■■□□ 2.45
CCNA1-202ENST00000440264 FANCD2Q9BXW9 1451 aa30.33■■■□□ 2.45
CCNA1-202ENST00000440264 EHMT2Q96KQ7 1210 aa30.23■■■□□ 2.43
CCNA1-202ENST00000440264 KIF21BO75037 1637 aa30.23■■■□□ 2.43
CCNA1-202ENST00000440264 GOLGA3Q08378 1498 aa30.15■■■□□ 2.42
CCNA1-202ENST00000440264 TNIKQ9UKE5 1360 aa30.14■■■□□ 2.42
CCNA1-202ENST00000440264 CEP164Q9UPV0 1460 aa30.13■■■□□ 2.41
CCNA1-202ENST00000440264 DNMBPQ6XZF7 1577 aa30.13■■■□□ 2.41
CCNA1-202ENST00000440264 FGD5Q6ZNL6 1462 aa30.11■■■□□ 2.41
CCNA1-202ENST00000440264 TOPBP1Q92547 1522 aa30.06■■■□□ 2.4
CCNA1-202ENST00000440264 KIF27Q86VH2 1401 aa30.04■■■□□ 2.4
CCNA1-202ENST00000440264 PRXQ9BXM0 1461 aa30.03■■■□□ 2.4
CCNA1-202ENST00000440264 PDS5BQ9NTI5 1447 aa30.03■■■□□ 2.4
CCNA1-202ENST00000440264 KIF21AQ7Z4S6 1674 aa30.01■■■□□ 2.4
CCNA1-202ENST00000440264 URB2Q14146 1524 aaKnown RBP30■■■□□ 2.39
CCNA1-202ENST00000440264 RAPGEF2Q9Y4G8 1499 aa30■■■□□ 2.39
CCNA1-202ENST00000440264 CEP162Q5TB80 1403 aa29.99■■■□□ 2.39
CCNA1-202ENST00000440264 ERICH3Q5RHP9 1530 aa29.97■■■□□ 2.39
CCNA1-202ENST00000440264 POLA1P09884 1462 aaPredicted RBP29.95■■■□□ 2.39
CCNA1-202ENST00000440264 CUX2O14529 1486 aa29.92■■■□□ 2.38
CCNA1-202ENST00000440264 ABCA10Q8WWZ4 1543 aa29.88■■■□□ 2.37
CCNA1-202ENST00000440264 UBTFP17480 764 aaKnown RBP29.87■■■□□ 2.37
CCNA1-202ENST00000440264 RAD54L2Q9Y4B4 1467 aa29.84■■■□□ 2.37
CCNA1-202ENST00000440264 WDR97A6NE52 1622 aa29.83■■■□□ 2.37
CCNA1-202ENST00000440264 IGF1RP08069 1367 aa29.83■■■□□ 2.37
CCNA1-202ENST00000440264 MRC2Q9UBG0 1479 aa29.69■■■□□ 2.34
CCNA1-202ENST00000440264 PCGF6Q9BYE7 350 aa29.68■■■□□ 2.34
CCNA1-202ENST00000440264 CLIP1P30622 1438 aa29.67■■■□□ 2.34
CCNA1-202ENST00000440264 TARBP1Q13395 1621 aaKnown RBP29.66■■■□□ 2.34
CCNA1-202ENST00000440264 ABCA5Q8WWZ7 1642 aa29.65■■■□□ 2.34
CCNA1-202ENST00000440264 TRIM26Q12899 539 aaPredicted RBP29.63■■■□□ 2.33
CCNA1-202ENST00000440264 CARMIL1Q5VZK9 1371 aa29.61■■■□□ 2.33
CCNA1-202ENST00000440264 WDR62O43379 1518 aa29.58■■■□□ 2.33
CCNA1-202ENST00000440264 CUL7Q14999 1698 aa29.55■■■□□ 2.32
CCNA1-202ENST00000440264 VPS8Q8N3P4 1428 aa29.48■■■□□ 2.31
CCNA1-202ENST00000440264 GAPVD1Q14C86 1478 aa29.47■■■□□ 2.31
CCNA1-202ENST00000440264 TDRD9Q8NDG6 1382 aaKnown RBP29.47■■■□□ 2.31
CCNA1-202ENST00000440264 THOC2Q8NI27 1593 aaKnown RBP29.47■■■□□ 2.31
CCNA1-202ENST00000440264 ARAP1Q96P48 1450 aa29.45■■■□□ 2.3
CCNA1-202ENST00000440264 ARHGAP35Q9NRY4 1499 aa29.38■■■□□ 2.29
CCNA1-202ENST00000440264 ERCC6Q03468 1493 aa29.37■■■□□ 2.29
CCNA1-202ENST00000440264 IFT140Q96RY7 1462 aa29.36■■■□□ 2.29
CCNA1-202ENST00000440264 PPARGC1BQ86YN6 1023 aaKnown RBP29.35■■■□□ 2.29
CCNA1-202ENST00000440264 PBRM1Q86U86 1689 aa29.35■■■□□ 2.29
CCNA1-202ENST00000440264 CTTNBP2Q8WZ74 1663 aa29.28■■■□□ 2.28
CCNA1-202ENST00000440264 RANGAP1P46060 587 aaPredicted RBP29.27■■■□□ 2.28
CCNA1-202ENST00000440264 AQRO60306 1485 aaKnown RBP eCLIP29.27■■■□□ 2.28
CCNA1-202ENST00000440264 ZNF608Q9ULD9 1512 aaPredicted RBP29.26■■■□□ 2.27
CCNA1-202ENST00000440264 ADAMTS12P58397 1594 aa29.21■■■□□ 2.27
CCNA1-202ENST00000440264 GRIN2BQ13224 1484 aa29.2■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms