RNA–Protein interactions for RNA: ENST00000617313.4

DNAJC28-204, Transcript of DnaJ heat shock protein family (Hsp40) member C28, humanhuman

APPRIS P1 TSL 5 BASIC

Gene DNAJC28, Length 2,237 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNAJC28-204ENST00000617313 NISCHQ9Y2I1 1504 aa42.58■■■■■ 4.41
DNAJC28-204ENST00000617313 CCDC180Q9P1Z9 1646 aa37■■■■□ 3.51
DNAJC28-204ENST00000617313 ZCCHC6Q5VYS8 1495 aaKnown RBP35.79■■■■□ 3.32
DNAJC28-204ENST00000617313 DCAF8L2P0C7V8 631 aa35.3■■■■□ 3.24
DNAJC28-204ENST00000617313 DCAF1Q9Y4B6 1507 aa35.09■■■■□ 3.21
DNAJC28-204ENST00000617313 ABCC9O60706 1549 aa35.08■■■■□ 3.21
DNAJC28-204ENST00000617313 SHROOM4Q9ULL8 1493 aa35.03■■■■□ 3.2
DNAJC28-204ENST00000617313 MYO15BQ96JP2 1530 aa34.6■■■■□ 3.13
DNAJC28-204ENST00000617313 NACADO15069 1562 aa34.43■■■■□ 3.1
DNAJC28-204ENST00000617313 SCRIBQ14160 1630 aa34.22■■■■□ 3.07
DNAJC28-204ENST00000617313 RB1CC1Q8TDY2 1594 aa34.14■■■■□ 3.06
DNAJC28-204ENST00000617313 SUPT5HO00267 1087 aaKnown RBP33.72■■■□□ 2.99
DNAJC28-204ENST00000617313 UNC13AQ9UPW8 1703 aa33.63■■■□□ 2.97
DNAJC28-204ENST00000617313 BICRAQ9NZM4 1560 aa33.21■■■□□ 2.91
DNAJC28-204ENST00000617313 CECR2Q9BXF3 1484 aa33.19■■■□□ 2.9
DNAJC28-204ENST00000617313 PABPN1Q86U42 306 aaKnown RBP eCLIP33.16■■■□□ 2.9
DNAJC28-204ENST00000617313 RSF1Q96T23 1441 aaPredicted RBP33.11■■■□□ 2.89
DNAJC28-204ENST00000617313 MROH2BQ7Z745 1585 aa32.98■■■□□ 2.87
DNAJC28-204ENST00000617313 BAZ1AQ9NRL2 1556 aaPredicted RBP32.83■■■□□ 2.85
DNAJC28-204ENST00000617313 WIZO95785 1651 aa32.75■■■□□ 2.83
DNAJC28-204ENST00000617313 SMARCA4P51532 1647 aa32.73■■■□□ 2.83
DNAJC28-204ENST00000617313 TOP2AP11388 1531 aaKnown RBP32.29■■■□□ 2.76
DNAJC28-204ENST00000617313 CHIC1Q5VXU3 224 aa32.26■■■□□ 2.76
DNAJC28-204ENST00000617313 PEG3Q9GZU2 1588 aa32.25■■■□□ 2.75
DNAJC28-204ENST00000617313 EIF4G1Q04637 1599 aaKnown RBP32.18■■■□□ 2.74
DNAJC28-204ENST00000617313 ATAD2BQ9ULI0 1458 aa32.16■■■□□ 2.74
DNAJC28-204ENST00000617313 SMARCA2P51531 1590 aa32.07■■■□□ 2.72
DNAJC28-204ENST00000617313 CCDC88BA6NC98 1476 aa32.03■■■□□ 2.72
DNAJC28-204ENST00000617313 BAZ1BQ9UIG0 1483 aaKnown RBP31.98■■■□□ 2.71
DNAJC28-204ENST00000617313 NCAPD3P42695 1498 aa31.81■■■□□ 2.68
DNAJC28-204ENST00000617313 HMGXB3Q12766 1538 aa31.76■■■□□ 2.67
DNAJC28-204ENST00000617313 CC2D2AQ9P2K1 1620 aa31.71■■■□□ 2.67
DNAJC28-204ENST00000617313 TRIM41Q8WV44 630 aa31.59■■■□□ 2.65
DNAJC28-204ENST00000617313 ABCC8Q09428 1581 aa31.48■■■□□ 2.63
DNAJC28-204ENST00000617313 CFTRP13569 1480 aa31.16■■■□□ 2.58
DNAJC28-204ENST00000617313 FAM9AQ8IZU1 332 aaPredicted RBP31.15■■■□□ 2.58
DNAJC28-204ENST00000617313 LOC105371045A0A1W2PR82 267 aa31.14■■■□□ 2.58
DNAJC28-204ENST00000617313 WRNQ14191 1432 aaPredicted RBP eCLIP31.14■■■□□ 2.58
DNAJC28-204ENST00000617313 SYNJ1O43426 1573 aa31.08■■■□□ 2.57
DNAJC28-204ENST00000617313 DNAJC5BQ9UF47 199 aa31.06■■■□□ 2.56
DNAJC28-204ENST00000617313 CADPSQ9ULU8 1353 aa31.03■■■□□ 2.56
DNAJC28-204ENST00000617313 PRDM2Q13029 1718 aa31.02■■■□□ 2.56
DNAJC28-204ENST00000617313 SOGA1O94964 1423 aa30.88■■■□□ 2.53
DNAJC28-204ENST00000617313 NESP48681 1621 aa30.87■■■□□ 2.53
DNAJC28-204ENST00000617313 TOP2BQ02880 1626 aa30.87■■■□□ 2.53
DNAJC28-204ENST00000617313 BIVM-ERCC5R4GMW8 1640 aa30.83■■■□□ 2.53
DNAJC28-204ENST00000617313 EHMT2Q96KQ7 1210 aa30.82■■■□□ 2.52
DNAJC28-204ENST00000617313 CUX1P39880 1505 aa30.81■■■□□ 2.52
DNAJC28-204ENST00000617313 RUSC2Q8N2Y8 1516 aa30.81■■■□□ 2.52
DNAJC28-204ENST00000617313 FANCD2Q9BXW9 1451 aa30.73■■■□□ 2.51
DNAJC28-204ENST00000617313 LAMC3Q9Y6N6 1575 aa30.71■■■□□ 2.51
DNAJC28-204ENST00000617313 EEA1Q15075 1411 aa30.62■■■□□ 2.49
DNAJC28-204ENST00000617313 CSRNP3Q8WYN3 585 aa30.58■■■□□ 2.49
DNAJC28-204ENST00000617313 CEP164Q9UPV0 1460 aa30.49■■■□□ 2.47
DNAJC28-204ENST00000617313 KIF21AQ7Z4S6 1674 aa30.47■■■□□ 2.47
DNAJC28-204ENST00000617313 PDS5BQ9NTI5 1447 aa30.46■■■□□ 2.47
DNAJC28-204ENST00000617313 FGD5Q6ZNL6 1462 aa30.44■■■□□ 2.46
DNAJC28-204ENST00000617313 DNMBPQ6XZF7 1577 aa30.43■■■□□ 2.46
DNAJC28-204ENST00000617313 TOPBP1Q92547 1522 aa30.41■■■□□ 2.46
DNAJC28-204ENST00000617313 URB2Q14146 1524 aaKnown RBP30.37■■■□□ 2.45
DNAJC28-204ENST00000617313 KIF21BO75037 1637 aa30.32■■■□□ 2.44
DNAJC28-204ENST00000617313 KIF27Q86VH2 1401 aa30.31■■■□□ 2.44
DNAJC28-204ENST00000617313 GOLGA3Q08378 1498 aa30.3■■■□□ 2.44
DNAJC28-204ENST00000617313 POLA1P09884 1462 aaPredicted RBP30.28■■■□□ 2.44
DNAJC28-204ENST00000617313 CUX2O14529 1486 aa30.27■■■□□ 2.44
DNAJC28-204ENST00000617313 UBTFP17480 764 aaKnown RBP30.25■■■□□ 2.43
DNAJC28-204ENST00000617313 RAD54L2Q9Y4B4 1467 aa30.25■■■□□ 2.43
DNAJC28-204ENST00000617313 RAPGEF2Q9Y4G8 1499 aa30.23■■■□□ 2.43
DNAJC28-204ENST00000617313 TNIKQ9UKE5 1360 aa30.22■■■□□ 2.43
DNAJC28-204ENST00000617313 PRXQ9BXM0 1461 aa30.16■■■□□ 2.42
DNAJC28-204ENST00000617313 CEP162Q5TB80 1403 aa30.14■■■□□ 2.42
DNAJC28-204ENST00000617313 ABCA10Q8WWZ4 1543 aa30.12■■■□□ 2.41
DNAJC28-204ENST00000617313 MRC2Q9UBG0 1479 aa30.09■■■□□ 2.41
DNAJC28-204ENST00000617313 IGF1RP08069 1367 aa30.08■■■□□ 2.41
DNAJC28-204ENST00000617313 ERICH3Q5RHP9 1530 aa30.07■■■□□ 2.4
DNAJC28-204ENST00000617313 WDR97A6NE52 1622 aa30.06■■■□□ 2.4
DNAJC28-204ENST00000617313 ERCC6Q03468 1493 aa30■■■□□ 2.39
DNAJC28-204ENST00000617313 TARBP1Q13395 1621 aaKnown RBP29.95■■■□□ 2.38
DNAJC28-204ENST00000617313 WDR62O43379 1518 aa29.93■■■□□ 2.38
DNAJC28-204ENST00000617313 TDRD9Q8NDG6 1382 aaKnown RBP29.93■■■□□ 2.38
DNAJC28-204ENST00000617313 CARMIL1Q5VZK9 1371 aa29.92■■■□□ 2.38
DNAJC28-204ENST00000617313 ABCA5Q8WWZ7 1642 aa29.9■■■□□ 2.38
DNAJC28-204ENST00000617313 RANGAP1P46060 587 aaPredicted RBP29.88■■■□□ 2.37
DNAJC28-204ENST00000617313 THOC2Q8NI27 1593 aaKnown RBP29.87■■■□□ 2.37
DNAJC28-204ENST00000617313 CLIP1P30622 1438 aa29.86■■■□□ 2.37
DNAJC28-204ENST00000617313 GAPVD1Q14C86 1478 aa29.83■■■□□ 2.37
DNAJC28-204ENST00000617313 PCGF6Q9BYE7 350 aa29.79■■■□□ 2.36
DNAJC28-204ENST00000617313 CUL7Q14999 1698 aa29.78■■■□□ 2.36
DNAJC28-204ENST00000617313 PPARGC1BQ86YN6 1023 aaKnown RBP29.75■■■□□ 2.35
DNAJC28-204ENST00000617313 AQRO60306 1485 aaKnown RBP eCLIP29.73■■■□□ 2.35
DNAJC28-204ENST00000617313 IFT140Q96RY7 1462 aa29.72■■■□□ 2.35
DNAJC28-204ENST00000617313 PBRM1Q86U86 1689 aa29.7■■■□□ 2.34
DNAJC28-204ENST00000617313 ZNF608Q9ULD9 1512 aaPredicted RBP29.69■■■□□ 2.34
DNAJC28-204ENST00000617313 TRIM26Q12899 539 aaPredicted RBP29.64■■■□□ 2.33
DNAJC28-204ENST00000617313 ARAP1Q96P48 1450 aa29.59■■■□□ 2.33
DNAJC28-204ENST00000617313 VPS8Q8N3P4 1428 aa29.59■■■□□ 2.33
DNAJC28-204ENST00000617313 ARHGAP35Q9NRY4 1499 aa29.56■■■□□ 2.32
DNAJC28-204ENST00000617313 EIF4G3O43432 1585 aaKnown RBP29.55■■■□□ 2.32
DNAJC28-204ENST00000617313 GRIN2BQ13224 1484 aa29.54■■■□□ 2.32
DNAJC28-204ENST00000617313 CTTNBP2Q8WZ74 1663 aa29.53■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms