RNA–Protein interactions for RNA: ENST00000557729.1

LINC01956-201, Transcript of long intergenic non-protein coding RNA 1956, humanhuman

TSL 5 BASIC

Gene LINC01956, Length 695 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01956-201ENST00000557729 NISCHQ9Y2I1 1504 aa48.24■■■■■ 5.31
LINC01956-201ENST00000557729 CCDC180Q9P1Z9 1646 aa42.7■■■■■ 4.43
LINC01956-201ENST00000557729 ABCC9O60706 1549 aa41.43■■■■■ 4.22
LINC01956-201ENST00000557729 ZCCHC6Q5VYS8 1495 aaKnown RBP40.27■■■■■ 4.04
LINC01956-201ENST00000557729 DCAF8L2P0C7V8 631 aa40.27■■■■■ 4.04
LINC01956-201ENST00000557729 NACADO15069 1562 aa40.07■■■■■ 4.01
LINC01956-201ENST00000557729 RB1CC1Q8TDY2 1594 aa40.04■■■■■ 4
LINC01956-201ENST00000557729 MYO15BQ96JP2 1530 aa39.94■■■■□ 3.98
LINC01956-201ENST00000557729 DCAF1Q9Y4B6 1507 aa39.92■■■■□ 3.98
LINC01956-201ENST00000557729 UNC13AQ9UPW8 1703 aa39.05■■■■□ 3.84
LINC01956-201ENST00000557729 SCRIBQ14160 1630 aa39.03■■■■□ 3.84
LINC01956-201ENST00000557729 PABPN1Q86U42 306 aaKnown RBP eCLIP38.8■■■■□ 3.8
LINC01956-201ENST00000557729 BICRAQ9NZM4 1560 aa38.73■■■■□ 3.79
LINC01956-201ENST00000557729 SHROOM4Q9ULL8 1493 aa38.43■■■■□ 3.74
LINC01956-201ENST00000557729 EIF4G1Q04637 1599 aaKnown RBP37.72■■■■□ 3.63
LINC01956-201ENST00000557729 DNAJC5BQ9UF47 199 aa37.58■■■■□ 3.61
LINC01956-201ENST00000557729 CECR2Q9BXF3 1484 aa37.52■■■■□ 3.6
LINC01956-201ENST00000557729 CC2D2AQ9P2K1 1620 aa37.47■■■■□ 3.59
LINC01956-201ENST00000557729 BAZ1AQ9NRL2 1556 aaPredicted RBP37.4■■■■□ 3.58
LINC01956-201ENST00000557729 SMARCA4P51532 1647 aa37.35■■■■□ 3.57
LINC01956-201ENST00000557729 MROH2BQ7Z745 1585 aa37.18■■■■□ 3.54
LINC01956-201ENST00000557729 SMARCA2P51531 1590 aa37.05■■■■□ 3.52
LINC01956-201ENST00000557729 ATAD2BQ9ULI0 1458 aa37.05■■■■□ 3.52
LINC01956-201ENST00000557729 NCAPD3P42695 1498 aa36.95■■■■□ 3.51
LINC01956-201ENST00000557729 PEG3Q9GZU2 1588 aa36.95■■■■□ 3.51
LINC01956-201ENST00000557729 RSF1Q96T23 1441 aaPredicted RBP36.92■■■■□ 3.5
LINC01956-201ENST00000557729 HMGXB3Q12766 1538 aa36.82■■■■□ 3.48
LINC01956-201ENST00000557729 WIZO95785 1651 aa36.81■■■■□ 3.48
LINC01956-201ENST00000557729 BAZ1BQ9UIG0 1483 aaKnown RBP36.81■■■■□ 3.48
LINC01956-201ENST00000557729 TOP2AP11388 1531 aaKnown RBP36.46■■■■□ 3.43
LINC01956-201ENST00000557729 SUPT5HO00267 1087 aaKnown RBP36.39■■■■□ 3.42
LINC01956-201ENST00000557729 CCDC88BA6NC98 1476 aa36.02■■■■□ 3.36
LINC01956-201ENST00000557729 NESP48681 1621 aa35.94■■■■□ 3.34
LINC01956-201ENST00000557729 LAMC3Q9Y6N6 1575 aa35.94■■■■□ 3.34
LINC01956-201ENST00000557729 CADPSQ9ULU8 1353 aa35.93■■■■□ 3.34
LINC01956-201ENST00000557729 CFTRP13569 1480 aa35.78■■■■□ 3.32
LINC01956-201ENST00000557729 ERCC6Q03468 1493 aa35.73■■■■□ 3.31
LINC01956-201ENST00000557729 PDS5BQ9NTI5 1447 aa35.72■■■■□ 3.31
LINC01956-201ENST00000557729 PRDM2Q13029 1718 aa35.53■■■■□ 3.28
LINC01956-201ENST00000557729 FANCD2Q9BXW9 1451 aa35.53■■■■□ 3.28
LINC01956-201ENST00000557729 KIF21AQ7Z4S6 1674 aa35.52■■■■□ 3.28
LINC01956-201ENST00000557729 CEP164Q9UPV0 1460 aa35.45■■■■□ 3.27
LINC01956-201ENST00000557729 MRC2Q9UBG0 1479 aa35.3■■■■□ 3.24
LINC01956-201ENST00000557729 THOC2Q8NI27 1593 aaKnown RBP35.3■■■■□ 3.24
LINC01956-201ENST00000557729 CUX2O14529 1486 aa35.16■■■■□ 3.22
LINC01956-201ENST00000557729 WDR62O43379 1518 aa35.14■■■■□ 3.22
LINC01956-201ENST00000557729 URB2Q14146 1524 aaKnown RBP35.11■■■■□ 3.21
LINC01956-201ENST00000557729 ABCC8Q09428 1581 aa35.04■■■■□ 3.2
LINC01956-201ENST00000557729 TOPBP1Q92547 1522 aa34.99■■■■□ 3.19
LINC01956-201ENST00000557729 DNMBPQ6XZF7 1577 aa34.99■■■■□ 3.19
LINC01956-201ENST00000557729 CUX1P39880 1505 aa34.86■■■■□ 3.17
LINC01956-201ENST00000557729 WRNQ14191 1432 aaPredicted RBP eCLIP34.84■■■■□ 3.17
LINC01956-201ENST00000557729 POLA1P09884 1462 aaPredicted RBP34.71■■■■□ 3.15
LINC01956-201ENST00000557729 FGD5Q6ZNL6 1462 aa34.71■■■■□ 3.15
LINC01956-201ENST00000557729 IFT140Q96RY7 1462 aa34.69■■■■□ 3.14
LINC01956-201ENST00000557729 SYNJ1O43426 1573 aa34.68■■■■□ 3.14
LINC01956-201ENST00000557729 TOP2BQ02880 1626 aa34.68■■■■□ 3.14
LINC01956-201ENST00000557729 BIVM-ERCC5R4GMW8 1640 aa34.66■■■■□ 3.14
LINC01956-201ENST00000557729 SOGA1O94964 1423 aa34.62■■■■□ 3.13
LINC01956-201ENST00000557729 RAD54L2Q9Y4B4 1467 aa34.57■■■■□ 3.12
LINC01956-201ENST00000557729 TARBP1Q13395 1621 aaKnown RBP34.53■■■■□ 3.12
LINC01956-201ENST00000557729 ZNF608Q9ULD9 1512 aaPredicted RBP34.45■■■■□ 3.11
LINC01956-201ENST00000557729 ABCA10Q8WWZ4 1543 aa34.38■■■■□ 3.09
LINC01956-201ENST00000557729 TDRD9Q8NDG6 1382 aaKnown RBP34.36■■■■□ 3.09
LINC01956-201ENST00000557729 TRIM41Q8WV44 630 aa34.36■■■■□ 3.09
LINC01956-201ENST00000557729 WDR97A6NE52 1622 aa34.35■■■■□ 3.09
LINC01956-201ENST00000557729 EIF4G3O43432 1585 aaKnown RBP34.35■■■■□ 3.09
LINC01956-201ENST00000557729 AQRO60306 1485 aaKnown RBP eCLIP34.34■■■■□ 3.09
LINC01956-201ENST00000557729 GAPVD1Q14C86 1478 aa34.22■■■■□ 3.07
LINC01956-201ENST00000557729 ABCA5Q8WWZ7 1642 aa34.18■■■■□ 3.06
LINC01956-201ENST00000557729 GRIN2BQ13224 1484 aa34.16■■■■□ 3.06
LINC01956-201ENST00000557729 CHIC1Q5VXU3 224 aa34.15■■■■□ 3.06
LINC01956-201ENST00000557729 KIF27Q86VH2 1401 aa34.1■■■■□ 3.05
LINC01956-201ENST00000557729 PBRM1Q86U86 1689 aa34.09■■■■□ 3.05
LINC01956-201ENST00000557729 SNAPC4Q5SXM2 1469 aa34.05■■■■□ 3.04
LINC01956-201ENST00000557729 MAGI1Q96QZ7 1491 aaPredicted RBP34.01■■■■□ 3.04
LINC01956-201ENST00000557729 ERICH3Q5RHP9 1530 aa33.99■■■■□ 3.03
LINC01956-201ENST00000557729 FBLN2P98095 1184 aa33.94■■■■□ 3.02
LINC01956-201ENST00000557729 CHMP7Q8WUX9 453 aaPredicted RBP33.9■■■■□ 3.02
LINC01956-201ENST00000557729 SYNJ2O15056 1496 aa33.88■■■■□ 3.01
LINC01956-201ENST00000557729 IGF1RP08069 1367 aa33.85■■■■□ 3.01
LINC01956-201ENST00000557729 ADAMTS12P58397 1594 aa33.85■■■■□ 3.01
LINC01956-201ENST00000557729 RUSC2Q8N2Y8 1516 aa33.84■■■■□ 3.01
LINC01956-201ENST00000557729 FHAD1B1AJZ9 1412 aa33.84■■■■□ 3.01
LINC01956-201ENST00000557729 CHD1O14646 1710 aa33.83■■■■□ 3.01
LINC01956-201ENST00000557729 OSCARQ8IYS5 282 aa33.82■■■■□ 3
LINC01956-201ENST00000557729 CUL7Q14999 1698 aa33.77■■■■□ 3
LINC01956-201ENST00000557729 EEA1Q15075 1411 aa33.72■■■□□ 2.99
LINC01956-201ENST00000557729 CARMIL1Q5VZK9 1371 aa33.71■■■□□ 2.99
LINC01956-201ENST00000557729 GRIN2AQ12879 1464 aa33.7■■■□□ 2.99
LINC01956-201ENST00000557729 FAM9AQ8IZU1 332 aaPredicted RBP33.64■■■□□ 2.98
LINC01956-201ENST00000557729 CSRNP3Q8WYN3 585 aa33.62■■■□□ 2.97
LINC01956-201ENST00000557729 DNAJC5Q9H3Z4 198 aa33.57■■■□□ 2.96
LINC01956-201ENST00000557729 RAPGEF2Q9Y4G8 1499 aa33.56■■■□□ 2.96
LINC01956-201ENST00000557729 NUP160Q12769 1436 aa33.52■■■□□ 2.96
LINC01956-201ENST00000557729 CEP170Q5SW79 1584 aa33.49■■■□□ 2.95
LINC01956-201ENST00000557729 PRXQ9BXM0 1461 aa33.49■■■□□ 2.95
LINC01956-201ENST00000557729 CLASP1Q7Z460 1538 aa33.46■■■□□ 2.95
LINC01956-201ENST00000557729 KIAA0586Q9BVV6 1533 aa33.33■■■□□ 2.93
LINC01956-201ENST00000557729 KIF21BO75037 1637 aa33.3■■■□□ 2.92
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms