RNA–Protein interactions for RNA: ENST00000440850.5

SDHAP1-207, Transcript of succinate dehydrogenase complex flavoprotein subunit A pseudogene 1, humanhuman

BASIC

Gene SDHAP1, Length 2,000 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAP1-207ENST00000440850 NISCHQ9Y2I1 1504 aa44.47■■■■■ 4.71
SDHAP1-207ENST00000440850 CCDC180Q9P1Z9 1646 aa38.84■■■■□ 3.81
SDHAP1-207ENST00000440850 ZCCHC6Q5VYS8 1495 aaKnown RBP37.31■■■■□ 3.56
SDHAP1-207ENST00000440850 ABCC9O60706 1549 aa37.14■■■■□ 3.54
SDHAP1-207ENST00000440850 DCAF8L2P0C7V8 631 aa36.89■■■■□ 3.5
SDHAP1-207ENST00000440850 DCAF1Q9Y4B6 1507 aa36.71■■■■□ 3.47
SDHAP1-207ENST00000440850 MYO15BQ96JP2 1530 aa36.37■■■■□ 3.41
SDHAP1-207ENST00000440850 NACADO15069 1562 aa36.27■■■■□ 3.4
SDHAP1-207ENST00000440850 SHROOM4Q9ULL8 1493 aa36.18■■■■□ 3.38
SDHAP1-207ENST00000440850 RB1CC1Q8TDY2 1594 aa36.04■■■■□ 3.36
SDHAP1-207ENST00000440850 SCRIBQ14160 1630 aa35.79■■■■□ 3.32
SDHAP1-207ENST00000440850 UNC13AQ9UPW8 1703 aa35.32■■■■□ 3.25
SDHAP1-207ENST00000440850 BICRAQ9NZM4 1560 aa35.02■■■■□ 3.2
SDHAP1-207ENST00000440850 PABPN1Q86U42 306 aaKnown RBP eCLIP34.99■■■■□ 3.19
SDHAP1-207ENST00000440850 CECR2Q9BXF3 1484 aa34.65■■■■□ 3.14
SDHAP1-207ENST00000440850 SUPT5HO00267 1087 aaKnown RBP34.62■■■■□ 3.13
SDHAP1-207ENST00000440850 RSF1Q96T23 1441 aaPredicted RBP34.42■■■■□ 3.1
SDHAP1-207ENST00000440850 MROH2BQ7Z745 1585 aa34.39■■■■□ 3.1
SDHAP1-207ENST00000440850 BAZ1AQ9NRL2 1556 aaPredicted RBP34.34■■■■□ 3.09
SDHAP1-207ENST00000440850 SMARCA4P51532 1647 aa34.25■■■■□ 3.07
SDHAP1-207ENST00000440850 WIZO95785 1651 aa34.08■■■■□ 3.05
SDHAP1-207ENST00000440850 EIF4G1Q04637 1599 aaKnown RBP33.98■■■■□ 3.03
SDHAP1-207ENST00000440850 PEG3Q9GZU2 1588 aa33.81■■■■□ 3
SDHAP1-207ENST00000440850 ATAD2BQ9ULI0 1458 aa33.78■■■■□ 3
SDHAP1-207ENST00000440850 SMARCA2P51531 1590 aa33.69■■■□□ 2.98
SDHAP1-207ENST00000440850 TOP2AP11388 1531 aaKnown RBP33.69■■■□□ 2.98
SDHAP1-207ENST00000440850 BAZ1BQ9UIG0 1483 aaKnown RBP33.56■■■□□ 2.96
SDHAP1-207ENST00000440850 CC2D2AQ9P2K1 1620 aa33.56■■■□□ 2.96
SDHAP1-207ENST00000440850 NCAPD3P42695 1498 aa33.5■■■□□ 2.95
SDHAP1-207ENST00000440850 HMGXB3Q12766 1538 aa33.42■■■□□ 2.94
SDHAP1-207ENST00000440850 CCDC88BA6NC98 1476 aa33.37■■■□□ 2.93
SDHAP1-207ENST00000440850 DNAJC5BQ9UF47 199 aa33.08■■■□□ 2.89
SDHAP1-207ENST00000440850 CHIC1Q5VXU3 224 aa32.95■■■□□ 2.87
SDHAP1-207ENST00000440850 CFTRP13569 1480 aa32.7■■■□□ 2.83
SDHAP1-207ENST00000440850 CADPSQ9ULU8 1353 aa32.65■■■□□ 2.82
SDHAP1-207ENST00000440850 ABCC8Q09428 1581 aa32.61■■■□□ 2.81
SDHAP1-207ENST00000440850 NESP48681 1621 aa32.53■■■□□ 2.8
SDHAP1-207ENST00000440850 TRIM41Q8WV44 630 aa32.52■■■□□ 2.8
SDHAP1-207ENST00000440850 PRDM2Q13029 1718 aa32.42■■■□□ 2.78
SDHAP1-207ENST00000440850 LAMC3Q9Y6N6 1575 aa32.39■■■□□ 2.78
SDHAP1-207ENST00000440850 WRNQ14191 1432 aaPredicted RBP eCLIP32.39■■■□□ 2.78
SDHAP1-207ENST00000440850 FANCD2Q9BXW9 1451 aa32.3■■■□□ 2.76
SDHAP1-207ENST00000440850 SYNJ1O43426 1573 aa32.29■■■□□ 2.76
SDHAP1-207ENST00000440850 CUX1P39880 1505 aa32.17■■■□□ 2.74
SDHAP1-207ENST00000440850 PDS5BQ9NTI5 1447 aa32.16■■■□□ 2.74
SDHAP1-207ENST00000440850 TOP2BQ02880 1626 aa32.13■■■□□ 2.73
SDHAP1-207ENST00000440850 CEP164Q9UPV0 1460 aa32.11■■■□□ 2.73
SDHAP1-207ENST00000440850 BIVM-ERCC5R4GMW8 1640 aa32.09■■■□□ 2.73
SDHAP1-207ENST00000440850 KIF21AQ7Z4S6 1674 aa32.06■■■□□ 2.72
SDHAP1-207ENST00000440850 FAM9AQ8IZU1 332 aaPredicted RBP32■■■□□ 2.71
SDHAP1-207ENST00000440850 URB2Q14146 1524 aaKnown RBP31.94■■■□□ 2.7
SDHAP1-207ENST00000440850 SOGA1O94964 1423 aa31.94■■■□□ 2.7
SDHAP1-207ENST00000440850 DNMBPQ6XZF7 1577 aa31.92■■■□□ 2.7
SDHAP1-207ENST00000440850 TOPBP1Q92547 1522 aa31.92■■■□□ 2.7
SDHAP1-207ENST00000440850 FGD5Q6ZNL6 1462 aa31.86■■■□□ 2.69
SDHAP1-207ENST00000440850 RUSC2Q8N2Y8 1516 aa31.85■■■□□ 2.69
SDHAP1-207ENST00000440850 ERCC6Q03468 1493 aa31.83■■■□□ 2.69
SDHAP1-207ENST00000440850 MRC2Q9UBG0 1479 aa31.8■■■□□ 2.68
SDHAP1-207ENST00000440850 POLA1P09884 1462 aaPredicted RBP31.75■■■□□ 2.67
SDHAP1-207ENST00000440850 LOC105371045A0A1W2PR82 267 aa31.73■■■□□ 2.67
SDHAP1-207ENST00000440850 EEA1Q15075 1411 aa31.68■■■□□ 2.66
SDHAP1-207ENST00000440850 RAD54L2Q9Y4B4 1467 aa31.68■■■□□ 2.66
SDHAP1-207ENST00000440850 WDR62O43379 1518 aa31.64■■■□□ 2.66
SDHAP1-207ENST00000440850 THOC2Q8NI27 1593 aaKnown RBP31.63■■■□□ 2.65
SDHAP1-207ENST00000440850 EHMT2Q96KQ7 1210 aa31.61■■■□□ 2.65
SDHAP1-207ENST00000440850 CSRNP3Q8WYN3 585 aa31.61■■■□□ 2.65
SDHAP1-207ENST00000440850 CUX2O14529 1486 aa31.6■■■□□ 2.65
SDHAP1-207ENST00000440850 KIF27Q86VH2 1401 aa31.56■■■□□ 2.64
SDHAP1-207ENST00000440850 ABCA10Q8WWZ4 1543 aa31.54■■■□□ 2.64
SDHAP1-207ENST00000440850 WDR97A6NE52 1622 aa31.45■■■□□ 2.63
SDHAP1-207ENST00000440850 TARBP1Q13395 1621 aaKnown RBP31.45■■■□□ 2.63
SDHAP1-207ENST00000440850 TDRD9Q8NDG6 1382 aaKnown RBP31.4■■■□□ 2.62
SDHAP1-207ENST00000440850 IGF1RP08069 1367 aa31.36■■■□□ 2.61
SDHAP1-207ENST00000440850 IFT140Q96RY7 1462 aa31.34■■■□□ 2.61
SDHAP1-207ENST00000440850 KIF21BO75037 1637 aa31.33■■■□□ 2.61
SDHAP1-207ENST00000440850 ABCA5Q8WWZ7 1642 aa31.31■■■□□ 2.6
SDHAP1-207ENST00000440850 PRXQ9BXM0 1461 aa31.31■■■□□ 2.6
SDHAP1-207ENST00000440850 GOLGA3Q08378 1498 aa31.29■■■□□ 2.6
SDHAP1-207ENST00000440850 RAPGEF2Q9Y4G8 1499 aa31.28■■■□□ 2.6
SDHAP1-207ENST00000440850 ZNF608Q9ULD9 1512 aaPredicted RBP31.27■■■□□ 2.6
SDHAP1-207ENST00000440850 GAPVD1Q14C86 1478 aa31.27■■■□□ 2.6
SDHAP1-207ENST00000440850 AQRO60306 1485 aaKnown RBP eCLIP31.24■■■□□ 2.598e-7■■■■■ 40.2
SDHAP1-207ENST00000440850 UBTFP17480 764 aaKnown RBP31.19■■■□□ 2.58
SDHAP1-207ENST00000440850 CARMIL1Q5VZK9 1371 aa31.18■■■□□ 2.58
SDHAP1-207ENST00000440850 ERICH3Q5RHP9 1530 aa31.16■■■□□ 2.58
SDHAP1-207ENST00000440850 TNIKQ9UKE5 1360 aa31.12■■■□□ 2.57
SDHAP1-207ENST00000440850 EIF4G3O43432 1585 aaKnown RBP31.11■■■□□ 2.57
SDHAP1-207ENST00000440850 PBRM1Q86U86 1689 aa31.08■■■□□ 2.57
SDHAP1-207ENST00000440850 CUL7Q14999 1698 aa31.07■■■□□ 2.56
SDHAP1-207ENST00000440850 GRIN2BQ13224 1484 aa31.06■■■□□ 2.56
SDHAP1-207ENST00000440850 CEP162Q5TB80 1403 aa30.98■■■□□ 2.55
SDHAP1-207ENST00000440850 SNAPC4Q5SXM2 1469 aa30.94■■■□□ 2.54
SDHAP1-207ENST00000440850 ADAMTS12P58397 1594 aa30.93■■■□□ 2.54
SDHAP1-207ENST00000440850 FHAD1B1AJZ9 1412 aa30.91■■■□□ 2.54
SDHAP1-207ENST00000440850 RANGAP1P46060 587 aaPredicted RBP30.87■■■□□ 2.53
SDHAP1-207ENST00000440850 MAGI1Q96QZ7 1491 aaPredicted RBP30.82■■■□□ 2.52
SDHAP1-207ENST00000440850 CLIP1P30622 1438 aa30.8■■■□□ 2.52
SDHAP1-207ENST00000440850 SYNJ2O15056 1496 aa30.72■■■□□ 2.51
SDHAP1-207ENST00000440850 GRIN2AQ12879 1464 aa30.7■■■□□ 2.5
SDHAP1-207ENST00000440850 CTTNBP2Q8WZ74 1663 aa30.68■■■□□ 2.5
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms