RNA–Protein interactions for RNA: ENST00000529276.1

NDUFS3-207, Transcript of NADH:ubiquinone oxidoreductase core subunit S3, humanhuman

TSL 2 BASIC

Gene NDUFS3, Length 558 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3-207ENST00000529276 NISCHQ9Y2I1 1504 aa51.18■■■■■ 5.78
NDUFS3-207ENST00000529276 CCDC180Q9P1Z9 1646 aa45.63■■■■■ 4.89
NDUFS3-207ENST00000529276 ABCC9O60706 1549 aa45.01■■■■■ 4.8
NDUFS3-207ENST00000529276 RB1CC1Q8TDY2 1594 aa43.12■■■■■ 4.49
NDUFS3-207ENST00000529276 NACADO15069 1562 aa43■■■■■ 4.47
NDUFS3-207ENST00000529276 DCAF8L2P0C7V8 631 aa42.92■■■■■ 4.46
NDUFS3-207ENST00000529276 MYO15BQ96JP2 1530 aa42.63■■■■■ 4.42
NDUFS3-207ENST00000529276 ZCCHC6Q5VYS8 1495 aaKnown RBP42.57■■■■■ 4.41
NDUFS3-207ENST00000529276 DCAF1Q9Y4B6 1507 aa42.32■■■■■ 4.37
NDUFS3-207ENST00000529276 UNC13AQ9UPW8 1703 aa42.09■■■■■ 4.33
NDUFS3-207ENST00000529276 PABPN1Q86U42 306 aaKnown RBP eCLIP42.01■■■■■ 4.32
NDUFS3-207ENST00000529276 BICRAQ9NZM4 1560 aa41.82■■■■■ 4.29
NDUFS3-207ENST00000529276 SCRIBQ14160 1630 aa41.63■■■■■ 4.26
NDUFS3-207ENST00000529276 DNAJC5BQ9UF47 199 aa41.6■■■■■ 4.25
NDUFS3-207ENST00000529276 SHROOM4Q9ULL8 1493 aa41.38■■■■■ 4.21
NDUFS3-207ENST00000529276 EIF4G1Q04637 1599 aaKnown RBP40.76■■■■■ 4.12
NDUFS3-207ENST00000529276 CC2D2AQ9P2K1 1620 aa40.67■■■■■ 4.1
NDUFS3-207ENST00000529276 CECR2Q9BXF3 1484 aa40.48■■■■■ 4.07
NDUFS3-207ENST00000529276 SMARCA4P51532 1647 aa39.78■■■■□ 3.96
NDUFS3-207ENST00000529276 BAZ1AQ9NRL2 1556 aaPredicted RBP39.69■■■■□ 3.94
NDUFS3-207ENST00000529276 NCAPD3P42695 1498 aa39.68■■■■□ 3.94
NDUFS3-207ENST00000529276 ATAD2BQ9ULI0 1458 aa39.67■■■■□ 3.94
NDUFS3-207ENST00000529276 SMARCA2P51531 1590 aa39.59■■■■□ 3.93
NDUFS3-207ENST00000529276 HMGXB3Q12766 1538 aa39.45■■■■□ 3.91
NDUFS3-207ENST00000529276 MROH2BQ7Z745 1585 aa39.44■■■■□ 3.9
NDUFS3-207ENST00000529276 PEG3Q9GZU2 1588 aa39.39■■■■□ 3.9
NDUFS3-207ENST00000529276 BAZ1BQ9UIG0 1483 aaKnown RBP39.33■■■■□ 3.89
NDUFS3-207ENST00000529276 WIZO95785 1651 aa38.97■■■■□ 3.83
NDUFS3-207ENST00000529276 RSF1Q96T23 1441 aaPredicted RBP38.88■■■■□ 3.81
NDUFS3-207ENST00000529276 NESP48681 1621 aa38.84■■■■□ 3.81
NDUFS3-207ENST00000529276 ERCC6Q03468 1493 aa38.83■■■■□ 3.81
NDUFS3-207ENST00000529276 LAMC3Q9Y6N6 1575 aa38.68■■■■□ 3.78
NDUFS3-207ENST00000529276 TOP2AP11388 1531 aaKnown RBP38.57■■■■□ 3.76
NDUFS3-207ENST00000529276 CUX2O14529 1486 aa38.53■■■■□ 3.76
NDUFS3-207ENST00000529276 CADPSQ9ULU8 1353 aa38.52■■■■□ 3.76
NDUFS3-207ENST00000529276 PDS5BQ9NTI5 1447 aa38.46■■■■□ 3.75
NDUFS3-207ENST00000529276 KIF21AQ7Z4S6 1674 aa38.34■■■■□ 3.73
NDUFS3-207ENST00000529276 THOC2Q8NI27 1593 aaKnown RBP38.31■■■■□ 3.72
NDUFS3-207ENST00000529276 CFTRP13569 1480 aa38.22■■■■□ 3.71
NDUFS3-207ENST00000529276 CCDC88BA6NC98 1476 aa38.11■■■■□ 3.69
NDUFS3-207ENST00000529276 FANCD2Q9BXW9 1451 aa38.09■■■■□ 3.69
NDUFS3-207ENST00000529276 MRC2Q9UBG0 1479 aa38.09■■■■□ 3.69
NDUFS3-207ENST00000529276 CEP164Q9UPV0 1460 aa38.07■■■■□ 3.68
NDUFS3-207ENST00000529276 WDR62O43379 1518 aa37.97■■■■□ 3.67
NDUFS3-207ENST00000529276 PRDM2Q13029 1718 aa37.84■■■■□ 3.65
NDUFS3-207ENST00000529276 DNAJC5Q9H3Z4 198 aa37.73■■■■□ 3.63
NDUFS3-207ENST00000529276 URB2Q14146 1524 aaKnown RBP37.71■■■■□ 3.63
NDUFS3-207ENST00000529276 SUPT5HO00267 1087 aaKnown RBP37.65■■■■□ 3.62
NDUFS3-207ENST00000529276 TOPBP1Q92547 1522 aa37.43■■■■□ 3.58
NDUFS3-207ENST00000529276 ABCC8Q09428 1581 aa37.4■■■■□ 3.58
NDUFS3-207ENST00000529276 DNMBPQ6XZF7 1577 aa37.35■■■■□ 3.57
NDUFS3-207ENST00000529276 IFT140Q96RY7 1462 aa37.29■■■■□ 3.56
NDUFS3-207ENST00000529276 ZNF608Q9ULD9 1512 aaPredicted RBP37.15■■■■□ 3.54
NDUFS3-207ENST00000529276 POLA1P09884 1462 aaPredicted RBP37.09■■■■□ 3.53
NDUFS3-207ENST00000529276 TARBP1Q13395 1621 aaKnown RBP37.03■■■■□ 3.52
NDUFS3-207ENST00000529276 CUX1P39880 1505 aa37.02■■■■□ 3.52
NDUFS3-207ENST00000529276 EIF4G3O43432 1585 aaKnown RBP36.97■■■■□ 3.51
NDUFS3-207ENST00000529276 FGD5Q6ZNL6 1462 aa36.96■■■■□ 3.51
NDUFS3-207ENST00000529276 RAD54L2Q9Y4B4 1467 aa36.94■■■■□ 3.5
NDUFS3-207ENST00000529276 SOGA1O94964 1423 aa36.93■■■■□ 3.5
NDUFS3-207ENST00000529276 AQRO60306 1485 aaKnown RBP eCLIP36.88■■■■□ 3.5
NDUFS3-207ENST00000529276 OSCARQ8IYS5 282 aa36.88■■■■□ 3.49
NDUFS3-207ENST00000529276 TDRD9Q8NDG6 1382 aaKnown RBP36.78■■■■□ 3.48
NDUFS3-207ENST00000529276 WDR97A6NE52 1622 aa36.72■■■■□ 3.47
NDUFS3-207ENST00000529276 WRNQ14191 1432 aaPredicted RBP eCLIP36.68■■■■□ 3.46
NDUFS3-207ENST00000529276 TOP2BQ02880 1626 aa36.59■■■■□ 3.45
NDUFS3-207ENST00000529276 BIVM-ERCC5R4GMW8 1640 aa36.59■■■■□ 3.45
NDUFS3-207ENST00000529276 SYNJ1O43426 1573 aa36.58■■■■□ 3.45
NDUFS3-207ENST00000529276 ABCA10Q8WWZ4 1543 aa36.58■■■■□ 3.45
NDUFS3-207ENST00000529276 GRIN2BQ13224 1484 aa36.55■■■■□ 3.44
NDUFS3-207ENST00000529276 SNAPC4Q5SXM2 1469 aa36.55■■■■□ 3.44
NDUFS3-207ENST00000529276 CHD1O14646 1710 aa36.54■■■■□ 3.44
NDUFS3-207ENST00000529276 FBLN2P98095 1184 aa36.53■■■■□ 3.44
NDUFS3-207ENST00000529276 GAPVD1Q14C86 1478 aa36.5■■■■□ 3.43
NDUFS3-207ENST00000529276 MAGI1Q96QZ7 1491 aaPredicted RBP36.49■■■■□ 3.43
NDUFS3-207ENST00000529276 ABCA5Q8WWZ7 1642 aa36.45■■■■□ 3.43
NDUFS3-207ENST00000529276 PBRM1Q86U86 1689 aa36.41■■■■□ 3.42
NDUFS3-207ENST00000529276 TRIM41Q8WV44 630 aa36.38■■■■□ 3.41
NDUFS3-207ENST00000529276 CHMP7Q8WUX9 453 aaPredicted RBP36.37■■■■□ 3.41
NDUFS3-207ENST00000529276 SYNJ2O15056 1496 aa36.35■■■■□ 3.41
NDUFS3-207ENST00000529276 RIMBP3CA6NJZ7 1639 aa36.3■■■■□ 3.4
NDUFS3-207ENST00000529276 RIMBP3BA6NNM3 1639 aa36.3■■■■□ 3.4
NDUFS3-207ENST00000529276 RIMBP3Q9UFD9 1639 aa36.3■■■■□ 3.4
NDUFS3-207ENST00000529276 ARHGEF11O15085 1522 aa36.28■■■■□ 3.4
NDUFS3-207ENST00000529276 CLASP1Q7Z460 1538 aa36.17■■■■□ 3.38
NDUFS3-207ENST00000529276 ADAMTS12P58397 1594 aa36.14■■■■□ 3.38
NDUFS3-207ENST00000529276 ERICH3Q5RHP9 1530 aa36.13■■■■□ 3.37
NDUFS3-207ENST00000529276 GRIN2AQ12879 1464 aa36.08■■■■□ 3.37
NDUFS3-207ENST00000529276 FHAD1B1AJZ9 1412 aa36.08■■■■□ 3.37
NDUFS3-207ENST00000529276 CYB5RLQ6IPT4 315 aa35.97■■■■□ 3.35
NDUFS3-207ENST00000529276 ARAP1Q96P48 1450 aa35.97■■■■□ 3.35
NDUFS3-207ENST00000529276 NUP160Q12769 1436 aa35.94■■■■□ 3.34
NDUFS3-207ENST00000529276 KIF27Q86VH2 1401 aa35.94■■■■□ 3.34
NDUFS3-207ENST00000529276 CEP170Q5SW79 1584 aa35.9■■■■□ 3.34
NDUFS3-207ENST00000529276 IGF1RP08069 1367 aa35.82■■■■□ 3.32
NDUFS3-207ENST00000529276 CUL7Q14999 1698 aa35.72■■■■□ 3.31
NDUFS3-207ENST00000529276 SHROOM2Q13796 1616 aa35.67■■■■□ 3.3
NDUFS3-207ENST00000529276 ERCC6L2Q5T890 1561 aa35.64■■■■□ 3.3
NDUFS3-207ENST00000529276 CARMIL1Q5VZK9 1371 aa35.62■■■■□ 3.29
NDUFS3-207ENST00000529276 RUSC2Q8N2Y8 1516 aa35.61■■■■□ 3.29
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms