RNA–Protein interactions for RNA: ENST00000487137.6

CDH24-204, Transcript of cadherin 24, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDH24, Length 3,438 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH24-204ENST00000487137 NISCHQ9Y2I1 1504 aa33.31■■■□□ 2.92
CDH24-204ENST00000487137 SHROOM4Q9ULL8 1493 aa29.89■■■□□ 2.38
CDH24-204ENST00000487137 SUPT5HO00267 1087 aaKnown RBP29.74■■■□□ 2.35
CDH24-204ENST00000487137 HRCP23327 699 aa29.32■■■□□ 2.28
CDH24-204ENST00000487137 PCGF6Q9BYE7 350 aa29.14■■■□□ 2.25
CDH24-204ENST00000487137 PPARGC1BQ86YN6 1023 aaKnown RBP28.97■■■□□ 2.23
CDH24-204ENST00000487137 CHIC1Q5VXU3 224 aa28.86■■■□□ 2.21
CDH24-204ENST00000487137 MYO15BQ96JP2 1530 aa28.85■■■□□ 2.21
CDH24-204ENST00000487137 DCAF8L2P0C7V8 631 aa28.59■■■□□ 2.17
CDH24-204ENST00000487137 LOC105371045A0A1W2PR82 267 aa28.38■■■□□ 2.13
CDH24-204ENST00000487137 CCDC180Q9P1Z9 1646 aa28.24■■■□□ 2.11
CDH24-204ENST00000487137 ZCCHC6Q5VYS8 1495 aaKnown RBP28.23■■■□□ 2.11
CDH24-204ENST00000487137 ABCC9O60706 1549 aa28.21■■■□□ 2.11
CDH24-204ENST00000487137 TRIM26Q12899 539 aaPredicted RBP28.05■■■□□ 2.08
CDH24-204ENST00000487137 DCAF1Q9Y4B6 1507 aa28.01■■■□□ 2.08
CDH24-204ENST00000487137 PELP1Q8IZL8 1130 aaKnown RBP27.8■■■□□ 2.04
CDH24-204ENST00000487137 ZEB1P37275 1124 aaPredicted RBP27.67■■■□□ 2.02
CDH24-204ENST00000487137 EHMT2Q96KQ7 1210 aa27.67■■■□□ 2.02
CDH24-204ENST00000487137 SCAF1Q9H7N4 1312 aaKnown RBP27.65■■■□□ 2.02
CDH24-204ENST00000487137 FAM9AQ8IZU1 332 aaPredicted RBP27.6■■■□□ 2.01
CDH24-204ENST00000487137 TRIM41Q8WV44 630 aa27.4■■□□□ 1.98
CDH24-204ENST00000487137 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.1■■□□□ 1.93
CDH24-204ENST00000487137 NEUROD1Q13562 356 aa27.06■■□□□ 1.92
CDH24-204ENST00000487137 ACIN1Q9UKV3 1341 aaKnown RBP27.05■■□□□ 1.92
CDH24-204ENST00000487137 CCER1Q8TC90 406 aaPredicted RBP27.05■■□□□ 1.92
CDH24-204ENST00000487137 GTF3C3Q9Y5Q9 886 aa26.95■■□□□ 1.91
CDH24-204ENST00000487137 TTBK1Q5TCY1 1321 aaPredicted RBP26.91■■□□□ 1.9
CDH24-204ENST00000487137 CENPBP07199 599 aaPredicted RBP26.85■■□□□ 1.89
CDH24-204ENST00000487137 DIEXFQ68CQ4 756 aaKnown RBP26.85■■□□□ 1.89
CDH24-204ENST00000487137 RSF1Q96T23 1441 aaPredicted RBP26.83■■□□□ 1.89
CDH24-204ENST00000487137 PABPN1Q86U42 306 aaKnown RBP eCLIP26.81■■□□□ 1.88
CDH24-204ENST00000487137 RB1CC1Q8TDY2 1594 aa26.73■■□□□ 1.87
CDH24-204ENST00000487137 NACADO15069 1562 aa26.69■■□□□ 1.86
CDH24-204ENST00000487137 YTHDC1Q96MU7 727 aaKnown RBP26.64■■□□□ 1.86
CDH24-204ENST00000487137 SCRIBQ14160 1630 aa26.61■■□□□ 1.85
CDH24-204ENST00000487137 MYT1Q01538 1121 aa26.57■■□□□ 1.84
CDH24-204ENST00000487137 ZNF316A6NFI3 1004 aaPredicted RBP26.32■■□□□ 1.8
CDH24-204ENST00000487137 CECR2Q9BXF3 1484 aa26.23■■□□□ 1.79
CDH24-204ENST00000487137 MIER1Q8N108 512 aa26.18■■□□□ 1.78
CDH24-204ENST00000487137 UBTFP17480 764 aaKnown RBP26.14■■□□□ 1.78
CDH24-204ENST00000487137 HNRNPUL2Q1KMD3 747 aaKnown RBP26.11■■□□□ 1.77
CDH24-204ENST00000487137 MROH2BQ7Z745 1585 aa26.1■■□□□ 1.77
CDH24-204ENST00000487137 CEP162Q5TB80 1403 aa26.02■■□□□ 1.76
CDH24-204ENST00000487137 WIZO95785 1651 aa25.99■■□□□ 1.75
CDH24-204ENST00000487137 UNC13AQ9UPW8 1703 aa25.93■■□□□ 1.74
CDH24-204ENST00000487137 WRNQ14191 1432 aaPredicted RBP eCLIP25.89■■□□□ 1.745e-6■■■■■ 29.2
CDH24-204ENST00000487137 CCDC88BA6NC98 1476 aa25.89■■□□□ 1.73
CDH24-204ENST00000487137 ABCC8Q09428 1581 aa25.88■■□□□ 1.73
CDH24-204ENST00000487137 SOGA1O94964 1423 aa25.85■■□□□ 1.73
CDH24-204ENST00000487137 BICRAQ9NZM4 1560 aa25.83■■□□□ 1.73
CDH24-204ENST00000487137 CSRNP3Q8WYN3 585 aa25.83■■□□□ 1.73
CDH24-204ENST00000487137 RANGAP1P46060 587 aaPredicted RBP25.82■■□□□ 1.72
CDH24-204ENST00000487137 TNIKQ9UKE5 1360 aa25.79■■□□□ 1.72
CDH24-204ENST00000487137 APLP2Q06481 763 aa25.71■■□□□ 1.71
CDH24-204ENST00000487137 RUSC2Q8N2Y8 1516 aa25.68■■□□□ 1.7
CDH24-204ENST00000487137 BAZ1AQ9NRL2 1556 aaPredicted RBP25.63■■□□□ 1.69
CDH24-204ENST00000487137 SUPT16HQ9Y5B9 1047 aaKnown RBP25.6■■□□□ 1.69
CDH24-204ENST00000487137 EIF4G1Q04637 1599 aaKnown RBP25.56■■□□□ 1.68
CDH24-204ENST00000487137 GOLGA3Q08378 1498 aa25.51■■□□□ 1.67
CDH24-204ENST00000487137 DNAJC5BQ9UF47 199 aa25.5■■□□□ 1.67
CDH24-204ENST00000487137 EEA1Q15075 1411 aa25.45■■□□□ 1.66
CDH24-204ENST00000487137 BCANQ96GW7 911 aa25.42■■□□□ 1.66
CDH24-204ENST00000487137 CLIP1P30622 1438 aa25.41■■□□□ 1.66
CDH24-204ENST00000487137 TSHZ2Q9NRE2 1034 aa25.4■■□□□ 1.66
CDH24-204ENST00000487137 TOP2AP11388 1531 aaKnown RBP25.38■■□□□ 1.65
CDH24-204ENST00000487137 CLSPNQ9HAW4 1339 aa25.33■■□□□ 1.65
CDH24-204ENST00000487137 SMARCA2P51531 1590 aa25.33■■□□□ 1.64
CDH24-204ENST00000487137 ANP32EQ9BTT0 268 aa25.32■■□□□ 1.64
CDH24-204ENST00000487137 ITGAEP38570 1179 aa25.27■■□□□ 1.64
CDH24-204ENST00000487137 KCNH8Q96L42 1107 aa25.25■■□□□ 1.63
CDH24-204ENST00000487137 VPS8Q8N3P4 1428 aa25.25■■□□□ 1.63
CDH24-204ENST00000487137 CEP164Q9UPV0 1460 aa25.24■■□□□ 1.63
CDH24-204ENST00000487137 DHX57Q6P158 1386 aaKnown RBP25.2■■□□□ 1.62
CDH24-204ENST00000487137 SMARCA4P51532 1647 aa25.16■■□□□ 1.62
CDH24-204ENST00000487137 FKBP8Q14318 412 aa25.15■■□□□ 1.62
CDH24-204ENST00000487137 BCL11AQ9H165 835 aa25.12■■□□□ 1.61
CDH24-204ENST00000487137 RAPGEF2Q9Y4G8 1499 aa25.1■■□□□ 1.61
CDH24-204ENST00000487137 CC2D2AQ9P2K1 1620 aa25.1■■□□□ 1.61
CDH24-204ENST00000487137 KANK4Q5T7N3 995 aaPredicted RBP25.09■■□□□ 1.61
CDH24-204ENST00000487137 DDX10Q13206 875 aaKnown RBP25.02■■□□□ 1.6
CDH24-204ENST00000487137 ATAD2BQ9ULI0 1458 aa25.01■■□□□ 1.59
CDH24-204ENST00000487137 NEFLP07196 543 aa24.99■■□□□ 1.59
CDH24-204ENST00000487137 KIF21BO75037 1637 aa24.98■■□□□ 1.59
CDH24-204ENST00000487137 BAZ1BQ9UIG0 1483 aaKnown RBP24.97■■□□□ 1.59
CDH24-204ENST00000487137 SYNJ1O43426 1573 aa24.97■■□□□ 1.59
CDH24-204ENST00000487137 TRIM52Q96A61 297 aa24.92■■□□□ 1.58
CDH24-204ENST00000487137 HIRIP3Q9BW71 556 aaPredicted RBP24.91■■□□□ 1.58
CDH24-204ENST00000487137 RBM19Q9Y4C8 960 aaKnown RBP24.89■■□□□ 1.57
CDH24-204ENST00000487137 SIN3AQ96ST3 1273 aa24.8■■□□□ 1.56
CDH24-204ENST00000487137 CCNB3Q8WWL7 1395 aa24.77■■□□□ 1.56
CDH24-204ENST00000487137 NCAPD3P42695 1498 aa24.74■■□□□ 1.55
CDH24-204ENST00000487137 RAB3GAP2Q9H2M9 1393 aa24.72■■□□□ 1.55
CDH24-204ENST00000487137 ARAP1Q96P48 1450 aa24.71■■□□□ 1.55
CDH24-204ENST00000487137 FAM50AQ14320 339 aaKnown RBP24.7■■□□□ 1.54
CDH24-204ENST00000487137 ANP32CO43423 234 aa24.7■■□□□ 1.54
CDH24-204ENST00000487137 RRBP1Q9P2E9 1410 aaKnown RBP24.67■■□□□ 1.54
CDH24-204ENST00000487137 ATP1B4Q9UN42 357 aaPredicted RBP24.67■■□□□ 1.54
CDH24-204ENST00000487137 ERICH6Q7L0X2 663 aa24.66■■□□□ 1.54
CDH24-204ENST00000487137 IRX6P78412 446 aaPredicted RBP24.66■■□□□ 1.54
CDH24-204ENST00000487137 PPP1R15AO75807 674 aaPredicted RBP24.57■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms