Protein–RNA interactions for Protein: Q8NHS1

CLDND2, Claudin domain-containing protein 2, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND2Q8NHS1 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
CLDND2Q8NHS1 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
CLDND2Q8NHS1 DERL1-203ENST00000419562 918 ntTSL 2 BASIC16.12■□□□□ 0.17
CLDND2Q8NHS1 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC16.12■□□□□ 0.17
CLDND2Q8NHS1 ATP5G1P1-201ENST00000448724 379 ntBASIC16.12■□□□□ 0.17
CLDND2Q8NHS1 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC16.12■□□□□ 0.17
CLDND2Q8NHS1 CFL2-205ENST00000555765 632 ntTSL 2 BASIC16.12■□□□□ 0.17
CLDND2Q8NHS1 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC16.12■□□□□ 0.17
CLDND2Q8NHS1 AL590326.2-201ENST00000625139 305 ntBASIC16.12■□□□□ 0.17
CLDND2Q8NHS1 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
CLDND2Q8NHS1 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
CLDND2Q8NHS1 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CLDND2Q8NHS1 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC16.12■□□□□ 0.17
CLDND2Q8NHS1 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CLDND2Q8NHS1 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CLDND2Q8NHS1 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CLDND2Q8NHS1 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
CLDND2Q8NHS1 AC096733.2-201ENST00000609937 1394 ntBASIC16.12■□□□□ 0.17
CLDND2Q8NHS1 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CLDND2Q8NHS1 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CLDND2Q8NHS1 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC16.11■□□□□ 0.17
CLDND2Q8NHS1 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC16.11■□□□□ 0.17
CLDND2Q8NHS1 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CLDND2Q8NHS1 LBX2-AS1-202ENST00000603175 2083 ntBASIC16.11■□□□□ 0.17
CLDND2Q8NHS1 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CLDND2Q8NHS1 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CLDND2Q8NHS1 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC16.11■□□□□ 0.17
CLDND2Q8NHS1 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CLDND2Q8NHS1 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CLDND2Q8NHS1 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CLDND2Q8NHS1 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC16.11■□□□□ 0.17
CLDND2Q8NHS1 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC16.11■□□□□ 0.17
CLDND2Q8NHS1 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC16.11■□□□□ 0.17
CLDND2Q8NHS1 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC16.11■□□□□ 0.17
CLDND2Q8NHS1 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
CLDND2Q8NHS1 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CLDND2Q8NHS1 AC009237.14-201ENST00000609975 1594 ntBASIC16.11■□□□□ 0.17
CLDND2Q8NHS1 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC16.11■□□□□ 0.17
CLDND2Q8NHS1 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC16.11■□□□□ 0.17
CLDND2Q8NHS1 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC16.11■□□□□ 0.17
CLDND2Q8NHS1 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC16.11■□□□□ 0.17
CLDND2Q8NHS1 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CLDND2Q8NHS1 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CLDND2Q8NHS1 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CLDND2Q8NHS1 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
CLDND2Q8NHS1 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
CLDND2Q8NHS1 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CLDND2Q8NHS1 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CLDND2Q8NHS1 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CLDND2Q8NHS1 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CLDND2Q8NHS1 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
CLDND2Q8NHS1 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
CLDND2Q8NHS1 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CLDND2Q8NHS1 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CLDND2Q8NHS1 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CLDND2Q8NHS1 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CLDND2Q8NHS1 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CLDND2Q8NHS1 LINC01465-201ENST00000408887 1940 ntBASIC16.1■□□□□ 0.17
CLDND2Q8NHS1 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
CLDND2Q8NHS1 ARMC10P1-201ENST00000313754 855 ntBASIC16.1■□□□□ 0.17
CLDND2Q8NHS1 INGX-201ENST00000359239 846 ntBASIC16.1■□□□□ 0.17
CLDND2Q8NHS1 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC16.1■□□□□ 0.17
CLDND2Q8NHS1 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC16.1■□□□□ 0.17
CLDND2Q8NHS1 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC16.1■□□□□ 0.17
CLDND2Q8NHS1 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CLDND2Q8NHS1 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC16.1■□□□□ 0.17
CLDND2Q8NHS1 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC16.1■□□□□ 0.17
CLDND2Q8NHS1 RBM42-202ENST00000586618 771 ntTSL 3 BASIC16.1■□□□□ 0.17
CLDND2Q8NHS1 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC16.1■□□□□ 0.17
CLDND2Q8NHS1 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CLDND2Q8NHS1 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CLDND2Q8NHS1 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CLDND2Q8NHS1 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CLDND2Q8NHS1 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CLDND2Q8NHS1 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
CLDND2Q8NHS1 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CLDND2Q8NHS1 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CLDND2Q8NHS1 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC16.1■□□□□ 0.17
CLDND2Q8NHS1 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
CLDND2Q8NHS1 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC16.1■□□□□ 0.17
CLDND2Q8NHS1 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC16.1■□□□□ 0.17
CLDND2Q8NHS1 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CLDND2Q8NHS1 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC16.09■□□□□ 0.17
CLDND2Q8NHS1 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CLDND2Q8NHS1 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
CLDND2Q8NHS1 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC16.09■□□□□ 0.17
CLDND2Q8NHS1 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CLDND2Q8NHS1 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CLDND2Q8NHS1 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC16.09■□□□□ 0.17
CLDND2Q8NHS1 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CLDND2Q8NHS1 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CLDND2Q8NHS1 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC16.09■□□□□ 0.17
CLDND2Q8NHS1 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC16.09■□□□□ 0.17
CLDND2Q8NHS1 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC16.09■□□□□ 0.17
CLDND2Q8NHS1 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
CLDND2Q8NHS1 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CLDND2Q8NHS1 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CLDND2Q8NHS1 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
CLDND2Q8NHS1 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC16.09■□□□□ 0.17
CLDND2Q8NHS1 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms