RNA–Protein interactions for RNA: ENST00000542602.1

PSMD9-208, Transcript of proteasome 26S subunit, non-ATPase 9, humanhuman

TSL 3 BASIC

Gene PSMD9, Length 516 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD9-208ENST00000542602 NISCHQ9Y2I1 1504 aa46.14■■■■■ 4.98
PSMD9-208ENST00000542602 CCDC180Q9P1Z9 1646 aa40.98■■■■■ 4.15
PSMD9-208ENST00000542602 ABCC9O60706 1549 aa40.4■■■■■ 4.06
PSMD9-208ENST00000542602 DCAF8L2P0C7V8 631 aa38.83■■■■□ 3.81
PSMD9-208ENST00000542602 RB1CC1Q8TDY2 1594 aa38.78■■■■□ 3.8
PSMD9-208ENST00000542602 NACADO15069 1562 aa38.71■■■■□ 3.79
PSMD9-208ENST00000542602 MYO15BQ96JP2 1530 aa38.46■■■■□ 3.75
PSMD9-208ENST00000542602 ZCCHC6Q5VYS8 1495 aaKnown RBP38.35■■■■□ 3.73
PSMD9-208ENST00000542602 DCAF1Q9Y4B6 1507 aa38.19■■■■□ 3.7
PSMD9-208ENST00000542602 PABPN1Q86U42 306 aaKnown RBP eCLIP37.83■■■■□ 3.65
PSMD9-208ENST00000542602 UNC13AQ9UPW8 1703 aa37.64■■■■□ 3.62
PSMD9-208ENST00000542602 BICRAQ9NZM4 1560 aa37.52■■■■□ 3.6
PSMD9-208ENST00000542602 SCRIBQ14160 1630 aa37.37■■■■□ 3.57
PSMD9-208ENST00000542602 DNAJC5BQ9UF47 199 aa37.36■■■■□ 3.57
PSMD9-208ENST00000542602 SHROOM4Q9ULL8 1493 aa37.25■■■■□ 3.55
PSMD9-208ENST00000542602 EIF4G1Q04637 1599 aaKnown RBP36.59■■■■□ 3.45
PSMD9-208ENST00000542602 CC2D2AQ9P2K1 1620 aa36.48■■■■□ 3.43
PSMD9-208ENST00000542602 CECR2Q9BXF3 1484 aa36.37■■■■□ 3.41
PSMD9-208ENST00000542602 NCAPD3P42695 1498 aa35.8■■■■□ 3.32
PSMD9-208ENST00000542602 BAZ1AQ9NRL2 1556 aaPredicted RBP35.77■■■■□ 3.32
PSMD9-208ENST00000542602 SMARCA4P51532 1647 aa35.75■■■■□ 3.31
PSMD9-208ENST00000542602 ATAD2BQ9ULI0 1458 aa35.73■■■■□ 3.31
PSMD9-208ENST00000542602 SMARCA2P51531 1590 aa35.66■■■■□ 3.3
PSMD9-208ENST00000542602 MROH2BQ7Z745 1585 aa35.51■■■■□ 3.28
PSMD9-208ENST00000542602 HMGXB3Q12766 1538 aa35.47■■■■□ 3.27
PSMD9-208ENST00000542602 PEG3Q9GZU2 1588 aa35.46■■■■□ 3.27
PSMD9-208ENST00000542602 BAZ1BQ9UIG0 1483 aaKnown RBP35.41■■■■□ 3.26
PSMD9-208ENST00000542602 RSF1Q96T23 1441 aaPredicted RBP35.13■■■■□ 3.21
PSMD9-208ENST00000542602 WIZO95785 1651 aa35.04■■■■□ 3.2
PSMD9-208ENST00000542602 ERCC6Q03468 1493 aa34.89■■■■□ 3.18
PSMD9-208ENST00000542602 NESP48681 1621 aa34.86■■■■□ 3.17
PSMD9-208ENST00000542602 LAMC3Q9Y6N6 1575 aa34.79■■■■□ 3.16
PSMD9-208ENST00000542602 CADPSQ9ULU8 1353 aa34.77■■■■□ 3.16
PSMD9-208ENST00000542602 TOP2AP11388 1531 aaKnown RBP34.73■■■■□ 3.15
PSMD9-208ENST00000542602 PDS5BQ9NTI5 1447 aa34.69■■■■□ 3.14
PSMD9-208ENST00000542602 CUX2O14529 1486 aa34.59■■■■□ 3.13
PSMD9-208ENST00000542602 CFTRP13569 1480 aa34.46■■■■□ 3.11
PSMD9-208ENST00000542602 CCDC88BA6NC98 1476 aa34.39■■■■□ 3.1
PSMD9-208ENST00000542602 KIF21AQ7Z4S6 1674 aa34.31■■■■□ 3.08
PSMD9-208ENST00000542602 THOC2Q8NI27 1593 aaKnown RBP34.28■■■■□ 3.08
PSMD9-208ENST00000542602 FANCD2Q9BXW9 1451 aa34.28■■■■□ 3.08
PSMD9-208ENST00000542602 CEP164Q9UPV0 1460 aa34.25■■■■□ 3.07
PSMD9-208ENST00000542602 MRC2Q9UBG0 1479 aa34.24■■■■□ 3.07
PSMD9-208ENST00000542602 SUPT5HO00267 1087 aaKnown RBP34.17■■■■□ 3.06
PSMD9-208ENST00000542602 WDR62O43379 1518 aa34.08■■■■□ 3.05
PSMD9-208ENST00000542602 DNAJC5Q9H3Z4 198 aa33.91■■■■□ 3.02
PSMD9-208ENST00000542602 URB2Q14146 1524 aaKnown RBP33.9■■■■□ 3.02
PSMD9-208ENST00000542602 PRDM2Q13029 1718 aa33.89■■■■□ 3.02
PSMD9-208ENST00000542602 ABCC8Q09428 1581 aa33.79■■■■□ 3
PSMD9-208ENST00000542602 TOPBP1Q92547 1522 aa33.69■■■□□ 2.98
PSMD9-208ENST00000542602 DNMBPQ6XZF7 1577 aa33.6■■■□□ 2.97
PSMD9-208ENST00000542602 IFT140Q96RY7 1462 aa33.59■■■□□ 2.97
PSMD9-208ENST00000542602 POLA1P09884 1462 aaPredicted RBP33.38■■■□□ 2.93
PSMD9-208ENST00000542602 ZNF608Q9ULD9 1512 aaPredicted RBP33.38■■■□□ 2.93
PSMD9-208ENST00000542602 SOGA1O94964 1423 aa33.36■■■□□ 2.93
PSMD9-208ENST00000542602 CUX1P39880 1505 aa33.32■■■□□ 2.92
PSMD9-208ENST00000542602 OSCARQ8IYS5 282 aa33.3■■■□□ 2.92
PSMD9-208ENST00000542602 FGD5Q6ZNL6 1462 aa33.26■■■□□ 2.92
PSMD9-208ENST00000542602 TARBP1Q13395 1621 aaKnown RBP33.26■■■□□ 2.91
PSMD9-208ENST00000542602 RAD54L2Q9Y4B4 1467 aa33.25■■■□□ 2.91
PSMD9-208ENST00000542602 AQRO60306 1485 aaKnown RBP eCLIP33.23■■■□□ 2.911e-6■■■■□ 24.3
PSMD9-208ENST00000542602 TDRD9Q8NDG6 1382 aaKnown RBP33.17■■■□□ 2.9
PSMD9-208ENST00000542602 WRNQ14191 1432 aaPredicted RBP eCLIP33.13■■■□□ 2.89
PSMD9-208ENST00000542602 EIF4G3O43432 1585 aaKnown RBP33.13■■■□□ 2.89
PSMD9-208ENST00000542602 WDR97A6NE52 1622 aa33.05■■■□□ 2.88
PSMD9-208ENST00000542602 FBLN2P98095 1184 aa32.98■■■□□ 2.87
PSMD9-208ENST00000542602 ABCA10Q8WWZ4 1543 aa32.97■■■□□ 2.87
PSMD9-208ENST00000542602 TOP2BQ02880 1626 aa32.97■■■□□ 2.87
PSMD9-208ENST00000542602 GRIN2BQ13224 1484 aa32.94■■■□□ 2.86
PSMD9-208ENST00000542602 GAPVD1Q14C86 1478 aa32.91■■■□□ 2.86
PSMD9-208ENST00000542602 BIVM-ERCC5R4GMW8 1640 aa32.91■■■□□ 2.86
PSMD9-208ENST00000542602 CHMP7Q8WUX9 453 aaPredicted RBP32.9■■■□□ 2.86
PSMD9-208ENST00000542602 SYNJ1O43426 1573 aa32.9■■■□□ 2.86
PSMD9-208ENST00000542602 SNAPC4Q5SXM2 1469 aa32.86■■■□□ 2.85
PSMD9-208ENST00000542602 MAGI1Q96QZ7 1491 aaPredicted RBP32.86■■■□□ 2.85
PSMD9-208ENST00000542602 SYNJ2O15056 1496 aa32.74■■■□□ 2.83
PSMD9-208ENST00000542602 ABCA5Q8WWZ7 1642 aa32.73■■■□□ 2.83
PSMD9-208ENST00000542602 CHD1O14646 1710 aa32.68■■■□□ 2.82
PSMD9-208ENST00000542602 TRIM41Q8WV44 630 aa32.64■■■□□ 2.82
PSMD9-208ENST00000542602 PBRM1Q86U86 1689 aa32.62■■■□□ 2.81
PSMD9-208ENST00000542602 ERICH3Q5RHP9 1530 aa32.56■■■□□ 2.8
PSMD9-208ENST00000542602 FHAD1B1AJZ9 1412 aa32.56■■■□□ 2.8
PSMD9-208ENST00000542602 ARHGEF11O15085 1522 aa32.52■■■□□ 2.8
PSMD9-208ENST00000542602 KIF27Q86VH2 1401 aa32.51■■■□□ 2.79
PSMD9-208ENST00000542602 RIMBP3CA6NJZ7 1639 aa32.48■■■□□ 2.79
PSMD9-208ENST00000542602 RIMBP3BA6NNM3 1639 aa32.48■■■□□ 2.79
PSMD9-208ENST00000542602 RIMBP3Q9UFD9 1639 aa32.48■■■□□ 2.79
PSMD9-208ENST00000542602 GRIN2AQ12879 1464 aa32.47■■■□□ 2.79
PSMD9-208ENST00000542602 CLASP1Q7Z460 1538 aa32.45■■■□□ 2.78
PSMD9-208ENST00000542602 ADAMTS12P58397 1594 aa32.44■■■□□ 2.78
PSMD9-208ENST00000542602 CYB5RLQ6IPT4 315 aa32.42■■■□□ 2.78
PSMD9-208ENST00000542602 IGF1RP08069 1367 aa32.42■■■□□ 2.78
PSMD9-208ENST00000542602 NUP160Q12769 1436 aa32.36■■■□□ 2.77
PSMD9-208ENST00000542602 ARAP1Q96P48 1450 aa32.24■■■□□ 2.75
PSMD9-208ENST00000542602 CEP170Q5SW79 1584 aa32.23■■■□□ 2.75
PSMD9-208ENST00000542602 CARMIL1Q5VZK9 1371 aa32.22■■■□□ 2.75
PSMD9-208ENST00000542602 JPH4Q96JJ6 628 aa32.19■■■□□ 2.74
PSMD9-208ENST00000542602 CUL7Q14999 1698 aa32.15■■■□□ 2.74
PSMD9-208ENST00000542602 KIAA0586Q9BVV6 1533 aa32.05■■■□□ 2.72
PSMD9-208ENST00000542602 PRG4Q92954 1404 aaPredicted RBP32.03■■■□□ 2.72
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms