RNA–Protein interactions for RNA: ENST00000586618.5

RBM42-202, Transcript of RNA binding motif protein 42, humanhuman

TSL 3 BASIC

Gene RBM42, Length 771 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM42-202ENST00000586618 NISCHQ9Y2I1 1504 aa47.46■■■■■ 5.19
RBM42-202ENST00000586618 CCDC180Q9P1Z9 1646 aa42.62■■■■■ 4.41
RBM42-202ENST00000586618 ABCC9O60706 1549 aa42.41■■■■■ 4.38
RBM42-202ENST00000586618 RB1CC1Q8TDY2 1594 aa40.42■■■■■ 4.06
RBM42-202ENST00000586618 NACADO15069 1562 aa40.18■■■■■ 4.02
RBM42-202ENST00000586618 UNC13AQ9UPW8 1703 aa39.72■■■■□ 3.95
RBM42-202ENST00000586618 DCAF8L2P0C7V8 631 aa39.71■■■■□ 3.95
RBM42-202ENST00000586618 DNAJC5BQ9UF47 199 aa39.71■■■■□ 3.95
RBM42-202ENST00000586618 MYO15BQ96JP2 1530 aa39.69■■■■□ 3.94
RBM42-202ENST00000586618 PABPN1Q86U42 306 aaKnown RBP eCLIP39.42■■■■□ 3.9
RBM42-202ENST00000586618 ZCCHC6Q5VYS8 1495 aaKnown RBP39.41■■■■□ 3.9
RBM42-202ENST00000586618 BICRAQ9NZM4 1560 aa39.39■■■■□ 3.9
RBM42-202ENST00000586618 DCAF1Q9Y4B6 1507 aa39.24■■■■□ 3.87
RBM42-202ENST00000586618 SCRIBQ14160 1630 aa38.81■■■■□ 3.8
RBM42-202ENST00000586618 SHROOM4Q9ULL8 1493 aa38.74■■■■□ 3.79
RBM42-202ENST00000586618 CC2D2AQ9P2K1 1620 aa38.38■■■■□ 3.74
RBM42-202ENST00000586618 EIF4G1Q04637 1599 aaKnown RBP38.33■■■■□ 3.73
RBM42-202ENST00000586618 CECR2Q9BXF3 1484 aa38.17■■■■□ 3.7
RBM42-202ENST00000586618 NCAPD3P42695 1498 aa37.07■■■■□ 3.53
RBM42-202ENST00000586618 SMARCA4P51532 1647 aa37.06■■■■□ 3.52
RBM42-202ENST00000586618 ATAD2BQ9ULI0 1458 aa37.01■■■■□ 3.51
RBM42-202ENST00000586618 SMARCA2P51531 1590 aa36.88■■■■□ 3.49
RBM42-202ENST00000586618 HMGXB3Q12766 1538 aa36.88■■■■□ 3.49
RBM42-202ENST00000586618 BAZ1AQ9NRL2 1556 aaPredicted RBP36.81■■■■□ 3.48
RBM42-202ENST00000586618 PEG3Q9GZU2 1588 aa36.71■■■■□ 3.47
RBM42-202ENST00000586618 BAZ1BQ9UIG0 1483 aaKnown RBP36.61■■■■□ 3.45
RBM42-202ENST00000586618 MROH2BQ7Z745 1585 aa36.61■■■■□ 3.45
RBM42-202ENST00000586618 NESP48681 1621 aa36.52■■■■□ 3.44
RBM42-202ENST00000586618 ERCC6Q03468 1493 aa36.52■■■■□ 3.44
RBM42-202ENST00000586618 CUX2O14529 1486 aa36.5■■■■□ 3.43
RBM42-202ENST00000586618 DNAJC5Q9H3Z4 198 aa36.28■■■■□ 3.4
RBM42-202ENST00000586618 LAMC3Q9Y6N6 1575 aa36.25■■■■□ 3.39
RBM42-202ENST00000586618 THOC2Q8NI27 1593 aaKnown RBP36.22■■■■□ 3.39
RBM42-202ENST00000586618 WIZO95785 1651 aa36.19■■■■□ 3.38
RBM42-202ENST00000586618 KIF21AQ7Z4S6 1674 aa36.13■■■■□ 3.37
RBM42-202ENST00000586618 PDS5BQ9NTI5 1447 aa35.91■■■■□ 3.34
RBM42-202ENST00000586618 CADPSQ9ULU8 1353 aa35.9■■■■□ 3.34
RBM42-202ENST00000586618 RSF1Q96T23 1441 aaPredicted RBP35.83■■■■□ 3.33
RBM42-202ENST00000586618 TOP2AP11388 1531 aaKnown RBP35.72■■■■□ 3.31
RBM42-202ENST00000586618 MRC2Q9UBG0 1479 aa35.7■■■■□ 3.31
RBM42-202ENST00000586618 WDR62O43379 1518 aa35.68■■■■□ 3.3
RBM42-202ENST00000586618 CFTRP13569 1480 aa35.59■■■■□ 3.29
RBM42-202ENST00000586618 CEP164Q9UPV0 1460 aa35.56■■■■□ 3.28
RBM42-202ENST00000586618 FANCD2Q9BXW9 1451 aa35.54■■■■□ 3.28
RBM42-202ENST00000586618 PRDM2Q13029 1718 aa35.37■■■■□ 3.25
RBM42-202ENST00000586618 URB2Q14146 1524 aaKnown RBP35.32■■■■□ 3.25
RBM42-202ENST00000586618 CCDC88BA6NC98 1476 aa35.27■■■■□ 3.24
RBM42-202ENST00000586618 TOPBP1Q92547 1522 aa34.92■■■■□ 3.18
RBM42-202ENST00000586618 ZNF608Q9ULD9 1512 aaPredicted RBP34.85■■■■□ 3.17
RBM42-202ENST00000586618 IFT140Q96RY7 1462 aa34.83■■■■□ 3.17
RBM42-202ENST00000586618 DNMBPQ6XZF7 1577 aa34.81■■■■□ 3.16
RBM42-202ENST00000586618 ABCC8Q09428 1581 aa34.73■■■■□ 3.15
RBM42-202ENST00000586618 EIF4G3O43432 1585 aaKnown RBP34.71■■■■□ 3.15
RBM42-202ENST00000586618 TARBP1Q13395 1621 aaKnown RBP34.68■■■■□ 3.14
RBM42-202ENST00000586618 OSCARQ8IYS5 282 aa34.68■■■■□ 3.14
RBM42-202ENST00000586618 TRIM41Q8WV44 630 aa34.66■■■■□ 3.14
RBM42-202ENST00000586618 POLA1P09884 1462 aaPredicted RBP34.58■■■■□ 3.13
RBM42-202ENST00000586618 AQRO60306 1485 aaKnown RBP eCLIP34.47■■■■□ 3.112e-6■■■□□ 18.2
RBM42-202ENST00000586618 RIMBP3CA6NJZ7 1639 aa34.47■■■■□ 3.11
RBM42-202ENST00000586618 RIMBP3BA6NNM3 1639 aa34.47■■■■□ 3.11
RBM42-202ENST00000586618 RIMBP3Q9UFD9 1639 aa34.47■■■■□ 3.11
RBM42-202ENST00000586618 CHD1O14646 1710 aa34.45■■■■□ 3.11
RBM42-202ENST00000586618 RAD54L2Q9Y4B4 1467 aa34.43■■■■□ 3.1
RBM42-202ENST00000586618 CUX1P39880 1505 aa34.4■■■■□ 3.1
RBM42-202ENST00000586618 FGD5Q6ZNL6 1462 aa34.36■■■■□ 3.09
RBM42-202ENST00000586618 ARHGEF11O15085 1522 aa34.34■■■■□ 3.09
RBM42-202ENST00000586618 SOGA1O94964 1423 aa34.3■■■■□ 3.08
RBM42-202ENST00000586618 WDR97A6NE52 1622 aa34.26■■■■□ 3.08
RBM42-202ENST00000586618 TDRD9Q8NDG6 1382 aaKnown RBP34.24■■■■□ 3.07
RBM42-202ENST00000586618 SNAPC4Q5SXM2 1469 aa34.16■■■■□ 3.06
RBM42-202ENST00000586618 SUPT5HO00267 1087 aaKnown RBP34.13■■■■□ 3.05
RBM42-202ENST00000586618 MAGI1Q96QZ7 1491 aaPredicted RBP34.06■■■■□ 3.04
RBM42-202ENST00000586618 PBRM1Q86U86 1689 aa34.06■■■■□ 3.04
RBM42-202ENST00000586618 CLASP1Q7Z460 1538 aa34.05■■■■□ 3.04
RBM42-202ENST00000586618 FBLN2P98095 1184 aa34.05■■■■□ 3.04
RBM42-202ENST00000586618 GRIN2BQ13224 1484 aa34.04■■■■□ 3.04
RBM42-202ENST00000586618 ARAP1Q96P48 1450 aa34.03■■■■□ 3.04
RBM42-202ENST00000586618 ABCA5Q8WWZ7 1642 aa34.01■■■■□ 3.04
RBM42-202ENST00000586618 ABCA10Q8WWZ4 1543 aa33.98■■■■□ 3.03
RBM42-202ENST00000586618 SYNJ2O15056 1496 aa33.94■■■■□ 3.02
RBM42-202ENST00000586618 GAPVD1Q14C86 1478 aa33.94■■■■□ 3.02
RBM42-202ENST00000586618 SYNJ1O43426 1573 aa33.92■■■■□ 3.02
RBM42-202ENST00000586618 BIVM-ERCC5R4GMW8 1640 aa33.9■■■■□ 3.02
RBM42-202ENST00000586618 CYB5RLQ6IPT4 315 aa33.88■■■■□ 3.01
RBM42-202ENST00000586618 TOP2BQ02880 1626 aa33.86■■■■□ 3.01
RBM42-202ENST00000586618 CHMP7Q8WUX9 453 aaPredicted RBP33.82■■■■□ 3
RBM42-202ENST00000586618 WRNQ14191 1432 aaPredicted RBP eCLIP33.76■■■□□ 2.99
RBM42-202ENST00000586618 ADAMTS12P58397 1594 aa33.72■■■□□ 2.99
RBM42-202ENST00000586618 GRIN2AQ12879 1464 aa33.65■■■□□ 2.98
RBM42-202ENST00000586618 CEP170Q5SW79 1584 aa33.6■■■□□ 2.97
RBM42-202ENST00000586618 NUP160Q12769 1436 aa33.55■■■□□ 2.96
RBM42-202ENST00000586618 ERCC6L2Q5T890 1561 aa33.55■■■□□ 2.96
RBM42-202ENST00000586618 ERICH3Q5RHP9 1530 aa33.54■■■□□ 2.96
RBM42-202ENST00000586618 FHAD1B1AJZ9 1412 aa33.5■■■□□ 2.95
RBM42-202ENST00000586618 SHROOM2Q13796 1616 aa33.47■■■□□ 2.95
RBM42-202ENST00000586618 TRHP20396 242 aaPredicted RBP33.4■■■□□ 2.94
RBM42-202ENST00000586618 RUSC2Q8N2Y8 1516 aa33.27■■■□□ 2.92
RBM42-202ENST00000586618 PRG4Q92954 1404 aaPredicted RBP33.13■■■□□ 2.89
RBM42-202ENST00000586618 CUL7Q14999 1698 aa33.1■■■□□ 2.89
RBM42-202ENST00000586618 IGF1RP08069 1367 aa33.09■■■□□ 2.89
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms