RNA–Protein interactions for RNA: ENST00000617522.4

CPEB1-214, Transcript of cytoplasmic polyadenylation element binding protein 1, humanhuman

TSL 5 BASIC

Gene CPEB1, Length 2,220 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB1-214ENST00000617522 NISCHQ9Y2I1 1504 aa43.26■■■■■ 4.52
CPEB1-214ENST00000617522 CCDC180Q9P1Z9 1646 aa37.54■■■■□ 3.6
CPEB1-214ENST00000617522 ZCCHC6Q5VYS8 1495 aaKnown RBP36.31■■■■□ 3.4
CPEB1-214ENST00000617522 DCAF8L2P0C7V8 631 aa36.07■■■■□ 3.37
CPEB1-214ENST00000617522 ABCC9O60706 1549 aa35.87■■■■□ 3.33
CPEB1-214ENST00000617522 SHROOM4Q9ULL8 1493 aa35.75■■■■□ 3.31
CPEB1-214ENST00000617522 DCAF1Q9Y4B6 1507 aa35.58■■■■□ 3.29
CPEB1-214ENST00000617522 MYO15BQ96JP2 1530 aa35.12■■■■□ 3.21
CPEB1-214ENST00000617522 NACADO15069 1562 aa35.02■■■■□ 3.2
CPEB1-214ENST00000617522 SCRIBQ14160 1630 aa34.81■■■■□ 3.16
CPEB1-214ENST00000617522 RB1CC1Q8TDY2 1594 aa34.76■■■■□ 3.15
CPEB1-214ENST00000617522 SUPT5HO00267 1087 aaKnown RBP34.7■■■■□ 3.15
CPEB1-214ENST00000617522 UNC13AQ9UPW8 1703 aa34.15■■■■□ 3.06
CPEB1-214ENST00000617522 PABPN1Q86U42 306 aaKnown RBP eCLIP33.94■■■■□ 3.02
CPEB1-214ENST00000617522 BICRAQ9NZM4 1560 aa33.83■■■■□ 3.01
CPEB1-214ENST00000617522 CECR2Q9BXF3 1484 aa33.78■■■■□ 3
CPEB1-214ENST00000617522 RSF1Q96T23 1441 aaPredicted RBP33.63■■■□□ 2.97
CPEB1-214ENST00000617522 MROH2BQ7Z745 1585 aa33.52■■■□□ 2.96
CPEB1-214ENST00000617522 CHIC1Q5VXU3 224 aa33.37■■■□□ 2.93
CPEB1-214ENST00000617522 BAZ1AQ9NRL2 1556 aaPredicted RBP33.34■■■□□ 2.93
CPEB1-214ENST00000617522 WIZO95785 1651 aa33.25■■■□□ 2.91
CPEB1-214ENST00000617522 SMARCA4P51532 1647 aa33.24■■■□□ 2.91
CPEB1-214ENST00000617522 EIF4G1Q04637 1599 aaKnown RBP32.79■■■□□ 2.84
CPEB1-214ENST00000617522 TOP2AP11388 1531 aaKnown RBP32.77■■■□□ 2.84
CPEB1-214ENST00000617522 ATAD2BQ9ULI0 1458 aa32.74■■■□□ 2.83
CPEB1-214ENST00000617522 PEG3Q9GZU2 1588 aa32.74■■■□□ 2.83
CPEB1-214ENST00000617522 SMARCA2P51531 1590 aa32.61■■■□□ 2.81
CPEB1-214ENST00000617522 CCDC88BA6NC98 1476 aa32.55■■■□□ 2.8
CPEB1-214ENST00000617522 BAZ1BQ9UIG0 1483 aaKnown RBP32.55■■■□□ 2.8
CPEB1-214ENST00000617522 TRIM41Q8WV44 630 aa32.44■■■□□ 2.78
CPEB1-214ENST00000617522 NCAPD3P42695 1498 aa32.39■■■□□ 2.78
CPEB1-214ENST00000617522 CC2D2AQ9P2K1 1620 aa32.35■■■□□ 2.77
CPEB1-214ENST00000617522 LOC105371045A0A1W2PR82 267 aa32.29■■■□□ 2.76
CPEB1-214ENST00000617522 HMGXB3Q12766 1538 aa32.29■■■□□ 2.76
CPEB1-214ENST00000617522 FAM9AQ8IZU1 332 aaPredicted RBP32.08■■■□□ 2.73
CPEB1-214ENST00000617522 ABCC8Q09428 1581 aa31.95■■■□□ 2.71
CPEB1-214ENST00000617522 DNAJC5BQ9UF47 199 aa31.87■■■□□ 2.69
CPEB1-214ENST00000617522 EHMT2Q96KQ7 1210 aa31.78■■■□□ 2.68
CPEB1-214ENST00000617522 CFTRP13569 1480 aa31.7■■■□□ 2.67
CPEB1-214ENST00000617522 WRNQ14191 1432 aaPredicted RBP eCLIP31.63■■■□□ 2.65
CPEB1-214ENST00000617522 CADPSQ9ULU8 1353 aa31.62■■■□□ 2.65
CPEB1-214ENST00000617522 SYNJ1O43426 1573 aa31.53■■■□□ 2.64
CPEB1-214ENST00000617522 PCGF6Q9BYE7 350 aa31.53■■■□□ 2.64
CPEB1-214ENST00000617522 NESP48681 1621 aa31.51■■■□□ 2.63
CPEB1-214ENST00000617522 SOGA1O94964 1423 aa31.42■■■□□ 2.62
CPEB1-214ENST00000617522 PRDM2Q13029 1718 aa31.4■■■□□ 2.62
CPEB1-214ENST00000617522 CUX1P39880 1505 aa31.32■■■□□ 2.6
CPEB1-214ENST00000617522 TOP2BQ02880 1626 aa31.3■■■□□ 2.6
CPEB1-214ENST00000617522 FANCD2Q9BXW9 1451 aa31.3■■■□□ 2.6
CPEB1-214ENST00000617522 RUSC2Q8N2Y8 1516 aa31.28■■■□□ 2.6
CPEB1-214ENST00000617522 EEA1Q15075 1411 aa31.25■■■□□ 2.59
CPEB1-214ENST00000617522 LAMC3Q9Y6N6 1575 aa31.24■■■□□ 2.59
CPEB1-214ENST00000617522 BIVM-ERCC5R4GMW8 1640 aa31.23■■■□□ 2.59
CPEB1-214ENST00000617522 CSRNP3Q8WYN3 585 aa31.21■■■□□ 2.59
CPEB1-214ENST00000617522 TRIM26Q12899 539 aaPredicted RBP31.17■■■□□ 2.58
CPEB1-214ENST00000617522 CEP164Q9UPV0 1460 aa31.06■■■□□ 2.56
CPEB1-214ENST00000617522 PDS5BQ9NTI5 1447 aa31.06■■■□□ 2.56
CPEB1-214ENST00000617522 UBTFP17480 764 aaKnown RBP31.02■■■□□ 2.56
CPEB1-214ENST00000617522 HRCP23327 699 aa31.01■■■□□ 2.55
CPEB1-214ENST00000617522 KIF21AQ7Z4S6 1674 aa31■■■□□ 2.55
CPEB1-214ENST00000617522 GOLGA3Q08378 1498 aa30.97■■■□□ 2.55
CPEB1-214ENST00000617522 FGD5Q6ZNL6 1462 aa30.97■■■□□ 2.55
CPEB1-214ENST00000617522 TNIKQ9UKE5 1360 aa30.97■■■□□ 2.55
CPEB1-214ENST00000617522 CEP162Q5TB80 1403 aa30.96■■■□□ 2.55
CPEB1-214ENST00000617522 TOPBP1Q92547 1522 aa30.95■■■□□ 2.55
CPEB1-214ENST00000617522 URB2Q14146 1524 aaKnown RBP30.94■■■□□ 2.54
CPEB1-214ENST00000617522 DNMBPQ6XZF7 1577 aa30.93■■■□□ 2.54
CPEB1-214ENST00000617522 PPARGC1BQ86YN6 1023 aaKnown RBP30.88■■■□□ 2.53
CPEB1-214ENST00000617522 KIF21BO75037 1637 aa30.83■■■□□ 2.53
CPEB1-214ENST00000617522 POLA1P09884 1462 aaPredicted RBP30.82■■■□□ 2.52
CPEB1-214ENST00000617522 RAD54L2Q9Y4B4 1467 aa30.82■■■□□ 2.52
CPEB1-214ENST00000617522 CUX2O14529 1486 aa30.79■■■□□ 2.52
CPEB1-214ENST00000617522 KIF27Q86VH2 1401 aa30.79■■■□□ 2.52
CPEB1-214ENST00000617522 RAPGEF2Q9Y4G8 1499 aa30.72■■■□□ 2.51
CPEB1-214ENST00000617522 MRC2Q9UBG0 1479 aa30.68■■■□□ 2.5
CPEB1-214ENST00000617522 ERCC6Q03468 1493 aa30.67■■■□□ 2.5
CPEB1-214ENST00000617522 ABCA10Q8WWZ4 1543 aa30.61■■■□□ 2.49
CPEB1-214ENST00000617522 IGF1RP08069 1367 aa30.6■■■□□ 2.49
CPEB1-214ENST00000617522 PRXQ9BXM0 1461 aa30.59■■■□□ 2.49
CPEB1-214ENST00000617522 TTBK1Q5TCY1 1321 aaPredicted RBP30.57■■■□□ 2.48
CPEB1-214ENST00000617522 CLIP1P30622 1438 aa30.56■■■□□ 2.48
CPEB1-214ENST00000617522 RANGAP1P46060 587 aaPredicted RBP30.55■■■□□ 2.48
CPEB1-214ENST00000617522 TDRD9Q8NDG6 1382 aaKnown RBP30.54■■■□□ 2.48
CPEB1-214ENST00000617522 WDR62O43379 1518 aa30.49■■■□□ 2.47
CPEB1-214ENST00000617522 ERICH3Q5RHP9 1530 aa30.49■■■□□ 2.47
CPEB1-214ENST00000617522 WDR97A6NE52 1622 aa30.48■■■□□ 2.47
CPEB1-214ENST00000617522 TARBP1Q13395 1621 aaKnown RBP30.46■■■□□ 2.47
CPEB1-214ENST00000617522 THOC2Q8NI27 1593 aaKnown RBP30.44■■■□□ 2.46
CPEB1-214ENST00000617522 CARMIL1Q5VZK9 1371 aa30.43■■■□□ 2.46
CPEB1-214ENST00000617522 ABCA5Q8WWZ7 1642 aa30.36■■■□□ 2.45
CPEB1-214ENST00000617522 GAPVD1Q14C86 1478 aa30.36■■■□□ 2.45
CPEB1-214ENST00000617522 AQRO60306 1485 aaKnown RBP eCLIP30.33■■■□□ 2.451e-6■■■■□ 20
CPEB1-214ENST00000617522 VPS8Q8N3P4 1428 aa30.33■■■□□ 2.45
CPEB1-214ENST00000617522 ZNF608Q9ULD9 1512 aaPredicted RBP30.3■■■□□ 2.44
CPEB1-214ENST00000617522 IFT140Q96RY7 1462 aa30.27■■■□□ 2.44
CPEB1-214ENST00000617522 APLP2Q06481 763 aa30.2■■■□□ 2.43
CPEB1-214ENST00000617522 CUL7Q14999 1698 aa30.18■■■□□ 2.42
CPEB1-214ENST00000617522 ZEB1P37275 1124 aaPredicted RBP30.18■■■□□ 2.42
CPEB1-214ENST00000617522 ARAP1Q96P48 1450 aa30.14■■■□□ 2.42
CPEB1-214ENST00000617522 PBRM1Q86U86 1689 aa30.14■■■□□ 2.41
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms