RNA–Protein interactions for RNA: ENST00000371370.7

LRRC42-203, Transcript of leucine rich repeat containing 42, humanhuman

APPRIS P1 TSL 2 BASIC

Gene LRRC42, Length 2,037 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC42-203ENST00000371370 NISCHQ9Y2I1 1504 aa44.98■■■■■ 4.79
LRRC42-203ENST00000371370 CCDC180Q9P1Z9 1646 aa39.24■■■■□ 3.87
LRRC42-203ENST00000371370 ZCCHC6Q5VYS8 1495 aaKnown RBP37.78■■■■□ 3.64
LRRC42-203ENST00000371370 ABCC9O60706 1549 aa37.29■■■■□ 3.56
LRRC42-203ENST00000371370 DCAF8L2P0C7V8 631 aa37.22■■■■□ 3.55
LRRC42-203ENST00000371370 DCAF1Q9Y4B6 1507 aa37.17■■■■□ 3.54
LRRC42-203ENST00000371370 MYO15BQ96JP2 1530 aa36.78■■■■□ 3.48
LRRC42-203ENST00000371370 SHROOM4Q9ULL8 1493 aa36.66■■■■□ 3.46
LRRC42-203ENST00000371370 NACADO15069 1562 aa36.6■■■■□ 3.45
LRRC42-203ENST00000371370 RB1CC1Q8TDY2 1594 aa36.33■■■■□ 3.41
LRRC42-203ENST00000371370 SCRIBQ14160 1630 aa36.12■■■■□ 3.37
LRRC42-203ENST00000371370 UNC13AQ9UPW8 1703 aa35.51■■■■□ 3.28
LRRC42-203ENST00000371370 BICRAQ9NZM4 1560 aa35.23■■■■□ 3.23
LRRC42-203ENST00000371370 SUPT5HO00267 1087 aaKnown RBP35.18■■■■□ 3.22
LRRC42-203ENST00000371370 PABPN1Q86U42 306 aaKnown RBP eCLIP35.15■■■■□ 3.22
LRRC42-203ENST00000371370 CECR2Q9BXF3 1484 aa34.97■■■■□ 3.19
LRRC42-203ENST00000371370 RSF1Q96T23 1441 aaPredicted RBP34.86■■■■□ 3.17
LRRC42-203ENST00000371370 MROH2BQ7Z745 1585 aa34.75■■■■□ 3.15
LRRC42-203ENST00000371370 BAZ1AQ9NRL2 1556 aaPredicted RBP34.75■■■■□ 3.15
LRRC42-203ENST00000371370 SMARCA4P51532 1647 aa34.6■■■■□ 3.13
LRRC42-203ENST00000371370 WIZO95785 1651 aa34.44■■■■□ 3.1
LRRC42-203ENST00000371370 EIF4G1Q04637 1599 aaKnown RBP34.2■■■■□ 3.07
LRRC42-203ENST00000371370 PEG3Q9GZU2 1588 aa34.18■■■■□ 3.06
LRRC42-203ENST00000371370 TOP2AP11388 1531 aaKnown RBP34.1■■■■□ 3.05
LRRC42-203ENST00000371370 ATAD2BQ9ULI0 1458 aa34.08■■■■□ 3.05
LRRC42-203ENST00000371370 SMARCA2P51531 1590 aa34.04■■■■□ 3.04
LRRC42-203ENST00000371370 BAZ1BQ9UIG0 1483 aaKnown RBP33.89■■■■□ 3.02
LRRC42-203ENST00000371370 NCAPD3P42695 1498 aa33.79■■■■□ 3
LRRC42-203ENST00000371370 CCDC88BA6NC98 1476 aa33.75■■■□□ 2.99
LRRC42-203ENST00000371370 HMGXB3Q12766 1538 aa33.74■■■□□ 2.99
LRRC42-203ENST00000371370 CC2D2AQ9P2K1 1620 aa33.71■■■□□ 2.99
LRRC42-203ENST00000371370 CHIC1Q5VXU3 224 aa33.58■■■□□ 2.97
LRRC42-203ENST00000371370 TRIM41Q8WV44 630 aa33.09■■■□□ 2.89
LRRC42-203ENST00000371370 CFTRP13569 1480 aa33.03■■■□□ 2.88
LRRC42-203ENST00000371370 ABCC8Q09428 1581 aa33.02■■■□□ 2.88
LRRC42-203ENST00000371370 DNAJC5BQ9UF47 199 aa32.97■■■□□ 2.87
LRRC42-203ENST00000371370 CADPSQ9ULU8 1353 aa32.93■■■□□ 2.86
LRRC42-203ENST00000371370 WRNQ14191 1432 aaPredicted RBP eCLIP32.83■■■□□ 2.85
LRRC42-203ENST00000371370 PRDM2Q13029 1718 aa32.75■■■□□ 2.83
LRRC42-203ENST00000371370 NESP48681 1621 aa32.69■■■□□ 2.82
LRRC42-203ENST00000371370 SYNJ1O43426 1573 aa32.68■■■□□ 2.82
LRRC42-203ENST00000371370 LAMC3Q9Y6N6 1575 aa32.66■■■□□ 2.82
LRRC42-203ENST00000371370 FANCD2Q9BXW9 1451 aa32.58■■■□□ 2.81
LRRC42-203ENST00000371370 TOP2BQ02880 1626 aa32.55■■■□□ 2.8
LRRC42-203ENST00000371370 CUX1P39880 1505 aa32.51■■■□□ 2.79
LRRC42-203ENST00000371370 BIVM-ERCC5R4GMW8 1640 aa32.5■■■□□ 2.79
LRRC42-203ENST00000371370 FAM9AQ8IZU1 332 aaPredicted RBP32.49■■■□□ 2.79
LRRC42-203ENST00000371370 PDS5BQ9NTI5 1447 aa32.43■■■□□ 2.78
LRRC42-203ENST00000371370 CEP164Q9UPV0 1460 aa32.39■■■□□ 2.78
LRRC42-203ENST00000371370 SOGA1O94964 1423 aa32.38■■■□□ 2.77
LRRC42-203ENST00000371370 LOC105371045A0A1W2PR82 267 aa32.3■■■□□ 2.76
LRRC42-203ENST00000371370 EEA1Q15075 1411 aa32.27■■■□□ 2.76
LRRC42-203ENST00000371370 RUSC2Q8N2Y8 1516 aa32.25■■■□□ 2.75
LRRC42-203ENST00000371370 KIF21AQ7Z4S6 1674 aa32.25■■■□□ 2.75
LRRC42-203ENST00000371370 DNMBPQ6XZF7 1577 aa32.24■■■□□ 2.75
LRRC42-203ENST00000371370 TOPBP1Q92547 1522 aa32.2■■■□□ 2.75
LRRC42-203ENST00000371370 FGD5Q6ZNL6 1462 aa32.18■■■□□ 2.74
LRRC42-203ENST00000371370 URB2Q14146 1524 aaKnown RBP32.17■■■□□ 2.74
LRRC42-203ENST00000371370 CSRNP3Q8WYN3 585 aa32.1■■■□□ 2.73
LRRC42-203ENST00000371370 EHMT2Q96KQ7 1210 aa32.06■■■□□ 2.72
LRRC42-203ENST00000371370 POLA1P09884 1462 aaPredicted RBP32.05■■■□□ 2.72
LRRC42-203ENST00000371370 MRC2Q9UBG0 1479 aa32.02■■■□□ 2.72
LRRC42-203ENST00000371370 KIF27Q86VH2 1401 aa32■■■□□ 2.71
LRRC42-203ENST00000371370 ERCC6Q03468 1493 aa32■■■□□ 2.71
LRRC42-203ENST00000371370 CUX2O14529 1486 aa31.95■■■□□ 2.71
LRRC42-203ENST00000371370 RAD54L2Q9Y4B4 1467 aa31.94■■■□□ 2.7
LRRC42-203ENST00000371370 ABCA10Q8WWZ4 1543 aa31.88■■■□□ 2.69
LRRC42-203ENST00000371370 WDR62O43379 1518 aa31.86■■■□□ 2.69
LRRC42-203ENST00000371370 KIF21BO75037 1637 aa31.85■■■□□ 2.69
LRRC42-203ENST00000371370 GOLGA3Q08378 1498 aa31.83■■■□□ 2.69
LRRC42-203ENST00000371370 THOC2Q8NI27 1593 aaKnown RBP31.78■■■□□ 2.68
LRRC42-203ENST00000371370 WDR97A6NE52 1622 aa31.76■■■□□ 2.67
LRRC42-203ENST00000371370 PRXQ9BXM0 1461 aa31.75■■■□□ 2.67
LRRC42-203ENST00000371370 RAPGEF2Q9Y4G8 1499 aa31.72■■■□□ 2.67
LRRC42-203ENST00000371370 IGF1RP08069 1367 aa31.71■■■□□ 2.67
LRRC42-203ENST00000371370 TARBP1Q13395 1621 aaKnown RBP31.71■■■□□ 2.67
LRRC42-203ENST00000371370 UBTFP17480 764 aaKnown RBP31.7■■■□□ 2.67
LRRC42-203ENST00000371370 TNIKQ9UKE5 1360 aa31.69■■■□□ 2.66
LRRC42-203ENST00000371370 ERICH3Q5RHP9 1530 aa31.67■■■□□ 2.66
LRRC42-203ENST00000371370 TDRD9Q8NDG6 1382 aaKnown RBP31.65■■■□□ 2.66
LRRC42-203ENST00000371370 ABCA5Q8WWZ7 1642 aa31.63■■■□□ 2.65
LRRC42-203ENST00000371370 IFT140Q96RY7 1462 aa31.61■■■□□ 2.65
LRRC42-203ENST00000371370 GAPVD1Q14C86 1478 aa31.58■■■□□ 2.65
LRRC42-203ENST00000371370 CARMIL1Q5VZK9 1371 aa31.56■■■□□ 2.64
LRRC42-203ENST00000371370 CEP162Q5TB80 1403 aa31.54■■■□□ 2.64
LRRC42-203ENST00000371370 CUL7Q14999 1698 aa31.47■■■□□ 2.63
LRRC42-203ENST00000371370 AQRO60306 1485 aaKnown RBP eCLIP31.46■■■□□ 2.63
LRRC42-203ENST00000371370 ZNF608Q9ULD9 1512 aaPredicted RBP31.45■■■□□ 2.63
LRRC42-203ENST00000371370 PBRM1Q86U86 1689 aa31.37■■■□□ 2.61
LRRC42-203ENST00000371370 GRIN2BQ13224 1484 aa31.35■■■□□ 2.61
LRRC42-203ENST00000371370 EIF4G3O43432 1585 aaKnown RBP31.34■■■□□ 2.61
LRRC42-203ENST00000371370 CLIP1P30622 1438 aa31.32■■■□□ 2.6
LRRC42-203ENST00000371370 RANGAP1P46060 587 aaPredicted RBP31.25■■■□□ 2.59
LRRC42-203ENST00000371370 FHAD1B1AJZ9 1412 aa31.24■■■□□ 2.59
LRRC42-203ENST00000371370 ADAMTS12P58397 1594 aa31.23■■■□□ 2.59
LRRC42-203ENST00000371370 SNAPC4Q5SXM2 1469 aa31.18■■■□□ 2.58
LRRC42-203ENST00000371370 MAGI1Q96QZ7 1491 aaPredicted RBP31.1■■■□□ 2.57
LRRC42-203ENST00000371370 CTTNBP2Q8WZ74 1663 aa31.07■■■□□ 2.56
LRRC42-203ENST00000371370 ARHGAP35Q9NRY4 1499 aa31.04■■■□□ 2.56
LRRC42-203ENST00000371370 VPS8Q8N3P4 1428 aa31.03■■■□□ 2.56
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms