RNA–Protein interactions for RNA: ENST00000286307.5

LSM11-201, Transcript of LSM11, U7 small nuclear RNA associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM11, Length 6,584 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM11-201ENST00000286307 DCAF8L2P0C7V8 631 aa35.09■■■■□ 3.21
LSM11-201ENST00000286307 NISCHQ9Y2I1 1504 aa32.71■■■□□ 2.83
LSM11-201ENST00000286307 SUPT5HO00267 1087 aaKnown RBP32.25■■■□□ 2.75
LSM11-201ENST00000286307 SHROOM4Q9ULL8 1493 aa32.03■■■□□ 2.72
LSM11-201ENST00000286307 EHMT2Q96KQ7 1210 aa31.62■■■□□ 2.65
LSM11-201ENST00000286307 FAM9AQ8IZU1 332 aaPredicted RBP30.9■■■□□ 2.54
LSM11-201ENST00000286307 APLP2Q06481 763 aa30.74■■■□□ 2.51
LSM11-201ENST00000286307 RANGAP1P46060 587 aaPredicted RBP30.49■■■□□ 2.47
LSM11-201ENST00000286307 TTBK1Q5TCY1 1321 aaPredicted RBP30.35■■■□□ 2.45
LSM11-201ENST00000286307 ATP1B4Q9UN42 357 aaPredicted RBP30.31■■■□□ 2.44
LSM11-201ENST00000286307 TRIM41Q8WV44 630 aa29.84■■■□□ 2.37
LSM11-201ENST00000286307 UBTFP17480 764 aaKnown RBP29.71■■■□□ 2.35
LSM11-201ENST00000286307 MYT1LQ9UL68 1186 aa29.54■■■□□ 2.32
LSM11-201ENST00000286307 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.39■■■□□ 2.3
LSM11-201ENST00000286307 HNRNPUL2Q1KMD3 747 aaKnown RBP29.39■■■□□ 2.3
LSM11-201ENST00000286307 ABCC9O60706 1549 aa29.37■■■□□ 2.29
LSM11-201ENST00000286307 PCGF6Q9BYE7 350 aa29.36■■■□□ 2.29
LSM11-201ENST00000286307 PABPN1Q86U42 306 aaKnown RBP eCLIP29.26■■■□□ 2.28
LSM11-201ENST00000286307 PELP1Q8IZL8 1130 aaKnown RBP29.15■■■□□ 2.26
LSM11-201ENST00000286307 CHIC1Q5VXU3 224 aa29.04■■■□□ 2.24
LSM11-201ENST00000286307 CCER1Q8TC90 406 aaPredicted RBP28.99■■■□□ 2.23
LSM11-201ENST00000286307 PPARGC1BQ86YN6 1023 aaKnown RBP28.93■■■□□ 2.22
LSM11-201ENST00000286307 ITGAEP38570 1179 aa28.81■■■□□ 2.2
LSM11-201ENST00000286307 FBLN2P98095 1184 aa28.65■■■□□ 2.18
LSM11-201ENST00000286307 POLR3GLQ9BT43 218 aa28.57■■■□□ 2.16
LSM11-201ENST00000286307 SLC4A1APQ9BWU0 796 aaKnown RBP28.39■■■□□ 2.14
LSM11-201ENST00000286307 ZEB1P37275 1124 aaPredicted RBP28.35■■■□□ 2.13
LSM11-201ENST00000286307 CNGB1Q14028 1251 aaPredicted RBP28.27■■■□□ 2.12
LSM11-201ENST00000286307 LOC105371045A0A1W2PR82 267 aa28.13■■■□□ 2.09
LSM11-201ENST00000286307 YTHDC1Q96MU7 727 aaKnown RBP28.11■■■□□ 2.09
LSM11-201ENST00000286307 CENPBP07199 599 aaPredicted RBP28.11■■■□□ 2.09
LSM11-201ENST00000286307 ERICH6Q7L0X2 663 aa28.1■■■□□ 2.09
LSM11-201ENST00000286307 FAM50AQ14320 339 aaKnown RBP28.1■■■□□ 2.09
LSM11-201ENST00000286307 NEFLP07196 543 aa28.02■■■□□ 2.08
LSM11-201ENST00000286307 ARID3CA6NKF2 412 aa27.97■■■□□ 2.07
LSM11-201ENST00000286307 TRIM52Q96A61 297 aa27.97■■■□□ 2.07
LSM11-201ENST00000286307 BCANQ96GW7 911 aa27.92■■■□□ 2.06
LSM11-201ENST00000286307 TRIM26Q12899 539 aaPredicted RBP27.85■■■□□ 2.05
LSM11-201ENST00000286307 PLPPR3Q6T4P5 718 aa27.84■■■□□ 2.05
LSM11-201ENST00000286307 P3H3Q8IVL6 736 aa27.8■■■□□ 2.04
LSM11-201ENST00000286307 SCRIBQ14160 1630 aa27.7■■■□□ 2.02
LSM11-201ENST00000286307 ESF1Q9H501 851 aaKnown RBP27.66■■■□□ 2.02
LSM11-201ENST00000286307 ZNF326Q5BKZ1 582 aaKnown RBP27.64■■■□□ 2.02
LSM11-201ENST00000286307 NPM1P06748 294 aaKnown RBP eCLIP27.63■■■□□ 2.01
LSM11-201ENST00000286307 ZNF777Q9ULD5 760 aaPredicted RBP27.62■■■□□ 2.01
LSM11-201ENST00000286307 NEUROD1Q13562 356 aa27.57■■■□□ 2
LSM11-201ENST00000286307 SLC24A1O60721 1099 aa27.49■■□□□ 1.99
LSM11-201ENST00000286307 STAG3Q9UJ98 1225 aa27.37■■□□□ 1.97
LSM11-201ENST00000286307 DAXXQ9UER7 740 aaPredicted RBP27.34■■□□□ 1.97
LSM11-201ENST00000286307 CDK11AQ9UQ88 783 aaPredicted RBP27.34■■□□□ 1.97
LSM11-201ENST00000286307 CHGAP10645 457 aaKnown RBP27.28■■□□□ 1.96
LSM11-201ENST00000286307 CHMP7Q8WUX9 453 aaPredicted RBP27.22■■□□□ 1.95
LSM11-201ENST00000286307 CSRNP3Q8WYN3 585 aa27.16■■□□□ 1.94
LSM11-201ENST00000286307 CLSPNQ9HAW4 1339 aa27.12■■□□□ 1.93
LSM11-201ENST00000286307 HRCP23327 699 aa27.11■■□□□ 1.93
LSM11-201ENST00000286307 RB1CC1Q8TDY2 1594 aa27.1■■□□□ 1.93
LSM11-201ENST00000286307 NEFMP07197 916 aa27.02■■□□□ 1.92
LSM11-201ENST00000286307 BCL11AQ9H165 835 aa27.02■■□□□ 1.92
LSM11-201ENST00000286307 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.99■■□□□ 1.91
LSM11-201ENST00000286307 CCDC180Q9P1Z9 1646 aa26.96■■□□□ 1.91
LSM11-201ENST00000286307 SCAF1Q9H7N4 1312 aaKnown RBP26.91■■□□□ 1.9
LSM11-201ENST00000286307 ERCC6Q03468 1493 aa26.91■■□□□ 1.9
LSM11-201ENST00000286307 ZBTB47Q9UFB7 747 aaPredicted RBP26.91■■□□□ 1.9
LSM11-201ENST00000286307 KCNH8Q96L42 1107 aa26.88■■□□□ 1.89
LSM11-201ENST00000286307 ZCCHC6Q5VYS8 1495 aaKnown RBP26.86■■□□□ 1.89
LSM11-201ENST00000286307 SENP3Q9H4L4 574 aaPredicted RBP26.83■■□□□ 1.89
LSM11-201ENST00000286307 ARID4BQ4LE39 1312 aaPredicted RBP26.81■■□□□ 1.88
LSM11-201ENST00000286307 CHIC2Q9UKJ5 165 aa26.78■■□□□ 1.88
LSM11-201ENST00000286307 CANXP27824 592 aaKnown RBP26.78■■□□□ 1.88
LSM11-201ENST00000286307 ANP32CO43423 234 aa26.77■■□□□ 1.88
LSM11-201ENST00000286307 TRHP20396 242 aaPredicted RBP26.76■■□□□ 1.87
LSM11-201ENST00000286307 PLEKHG5O94827 1062 aa26.74■■□□□ 1.87
LSM11-201ENST00000286307 A0A0G2JS52 829 aa26.72■■□□□ 1.87
LSM11-201ENST00000286307 DIEXFQ68CQ4 756 aaKnown RBP26.71■■□□□ 1.87
LSM11-201ENST00000286307 ZNF316A6NFI3 1004 aaPredicted RBP26.69■■□□□ 1.86
LSM11-201ENST00000286307 TSPY4P0CV99 314 aa26.68■■□□□ 1.86
LSM11-201ENST00000286307 TSPY10P0CW01 314 aa26.68■■□□□ 1.86
LSM11-201ENST00000286307 C14orf37Q86TY3 774 aa26.64■■□□□ 1.86
LSM11-201ENST00000286307 ZBTB7CA1YPR0 619 aa26.59■■□□□ 1.85
LSM11-201ENST00000286307 PPP1R15AO75807 674 aaPredicted RBP26.58■■□□□ 1.85
LSM11-201ENST00000286307 BAZ1BQ9UIG0 1483 aaKnown RBP26.57■■□□□ 1.84
LSM11-201ENST00000286307 NACADO15069 1562 aa26.54■■□□□ 1.84
LSM11-201ENST00000286307 MTUS2Q5JR59 1369 aa26.53■■□□□ 1.84
LSM11-201ENST00000286307 PLEKHD1A6NEE1 506 aa26.5■■□□□ 1.83
LSM11-201ENST00000286307 KDM2AQ9Y2K7 1162 aa26.5■■□□□ 1.83
LSM11-201ENST00000286307 TONSLQ96HA7 1378 aa26.44■■□□□ 1.82
LSM11-201ENST00000286307 HAP1P54257 671 aaPredicted RBP26.42■■□□□ 1.82
LSM11-201ENST00000286307 MYT1Q01538 1121 aa26.31■■□□□ 1.8
LSM11-201ENST00000286307 RRP7BPQ9NSQ0 103 aa26.28■■□□□ 1.8
LSM11-201ENST00000286307 NPM2Q86SE8 214 aaKnown RBP26.21■■□□□ 1.79
LSM11-201ENST00000286307 MLECQ14165 292 aa26.21■■□□□ 1.79
LSM11-201ENST00000286307 SALL2Q9Y467 1007 aaPredicted RBP26.19■■□□□ 1.78
LSM11-201ENST00000286307 CFDP1Q9UEE9 299 aaPredicted RBP26.16■■□□□ 1.78
LSM11-201ENST00000286307 RGL3Q3MIN7 710 aa26.15■■□□□ 1.78
LSM11-201ENST00000286307 LMOD2Q6P5Q4 547 aa26.13■■□□□ 1.77
LSM11-201ENST00000286307 RTL5Q5HYW3 569 aaPredicted RBP26.12■■□□□ 1.77
LSM11-201ENST00000286307 RSF1Q96T23 1441 aaPredicted RBP26.12■■□□□ 1.77
LSM11-201ENST00000286307 CLIP1P30622 1438 aa26.11■■□□□ 1.77
LSM11-201ENST00000286307 TMC1Q8TDI8 760 aa26.11■■□□□ 1.77
LSM11-201ENST00000286307 EIF4G1Q04637 1599 aaKnown RBP26.1■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms