RNA–Protein interactions for RNA: ENST00000382500.3

FOXD4-201, Transcript of forkhead box D4, humanhuman

APPRIS P1 BASIC

Gene FOXD4, Length 1,974 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD4-201ENST00000382500 NISCHQ9Y2I1 1504 aa43.06■■■■■ 4.48
FOXD4-201ENST00000382500 CCDC180Q9P1Z9 1646 aa37.33■■■■□ 3.57
FOXD4-201ENST00000382500 ZCCHC6Q5VYS8 1495 aaKnown RBP36.27■■■■□ 3.4
FOXD4-201ENST00000382500 DCAF1Q9Y4B6 1507 aa35.57■■■■□ 3.29
FOXD4-201ENST00000382500 SHROOM4Q9ULL8 1493 aa35.47■■■■□ 3.27
FOXD4-201ENST00000382500 DCAF8L2P0C7V8 631 aa35.46■■■■□ 3.27
FOXD4-201ENST00000382500 ABCC9O60706 1549 aa35.03■■■■□ 3.2
FOXD4-201ENST00000382500 MYO15BQ96JP2 1530 aa35■■■■□ 3.19
FOXD4-201ENST00000382500 NACADO15069 1562 aa34.69■■■■□ 3.14
FOXD4-201ENST00000382500 SCRIBQ14160 1630 aa34.46■■■■□ 3.11
FOXD4-201ENST00000382500 RB1CC1Q8TDY2 1594 aa34.3■■■■□ 3.08
FOXD4-201ENST00000382500 SUPT5HO00267 1087 aaKnown RBP34.28■■■■□ 3.08
FOXD4-201ENST00000382500 UNC13AQ9UPW8 1703 aa33.64■■■□□ 2.98
FOXD4-201ENST00000382500 RSF1Q96T23 1441 aaPredicted RBP33.57■■■□□ 2.96
FOXD4-201ENST00000382500 CECR2Q9BXF3 1484 aa33.47■■■□□ 2.95
FOXD4-201ENST00000382500 MROH2BQ7Z745 1585 aa33.31■■■□□ 2.92
FOXD4-201ENST00000382500 BICRAQ9NZM4 1560 aa33.3■■■□□ 2.92
FOXD4-201ENST00000382500 BAZ1AQ9NRL2 1556 aaPredicted RBP33.21■■■□□ 2.91
FOXD4-201ENST00000382500 PABPN1Q86U42 306 aaKnown RBP eCLIP33.12■■■□□ 2.89
FOXD4-201ENST00000382500 WIZO95785 1651 aa33.05■■■□□ 2.88
FOXD4-201ENST00000382500 SMARCA4P51532 1647 aa33.03■■■□□ 2.88
FOXD4-201ENST00000382500 CHIC1Q5VXU3 224 aa33.01■■■□□ 2.87
FOXD4-201ENST00000382500 TOP2AP11388 1531 aaKnown RBP32.71■■■□□ 2.83
FOXD4-201ENST00000382500 PEG3Q9GZU2 1588 aa32.59■■■□□ 2.81
FOXD4-201ENST00000382500 SMARCA2P51531 1590 aa32.43■■■□□ 2.78
FOXD4-201ENST00000382500 ATAD2BQ9ULI0 1458 aa32.39■■■□□ 2.78
FOXD4-201ENST00000382500 CCDC88BA6NC98 1476 aa32.39■■■□□ 2.78
FOXD4-201ENST00000382500 EIF4G1Q04637 1599 aaKnown RBP32.34■■■□□ 2.77
FOXD4-201ENST00000382500 BAZ1BQ9UIG0 1483 aaKnown RBP32.23■■■□□ 2.75
FOXD4-201ENST00000382500 TRIM41Q8WV44 630 aa32.18■■■□□ 2.74
FOXD4-201ENST00000382500 NCAPD3P42695 1498 aa32.03■■■□□ 2.72
FOXD4-201ENST00000382500 HMGXB3Q12766 1538 aa32.02■■■□□ 2.72
FOXD4-201ENST00000382500 ABCC8Q09428 1581 aa31.86■■■□□ 2.69
FOXD4-201ENST00000382500 LOC105371045A0A1W2PR82 267 aa31.77■■■□□ 2.68
FOXD4-201ENST00000382500 CC2D2AQ9P2K1 1620 aa31.69■■■□□ 2.66
FOXD4-201ENST00000382500 FAM9AQ8IZU1 332 aaPredicted RBP31.65■■■□□ 2.66
FOXD4-201ENST00000382500 WRNQ14191 1432 aaPredicted RBP eCLIP31.58■■■□□ 2.65
FOXD4-201ENST00000382500 SYNJ1O43426 1573 aa31.46■■■□□ 2.63
FOXD4-201ENST00000382500 CFTRP13569 1480 aa31.44■■■□□ 2.62
FOXD4-201ENST00000382500 SOGA1O94964 1423 aa31.34■■■□□ 2.61
FOXD4-201ENST00000382500 EEA1Q15075 1411 aa31.31■■■□□ 2.6
FOXD4-201ENST00000382500 TOP2BQ02880 1626 aa31.27■■■□□ 2.6
FOXD4-201ENST00000382500 PRDM2Q13029 1718 aa31.25■■■□□ 2.59
FOXD4-201ENST00000382500 CADPSQ9ULU8 1353 aa31.24■■■□□ 2.59
FOXD4-201ENST00000382500 BIVM-ERCC5R4GMW8 1640 aa31.23■■■□□ 2.59
FOXD4-201ENST00000382500 DNAJC5BQ9UF47 199 aa31.23■■■□□ 2.59
FOXD4-201ENST00000382500 EHMT2Q96KQ7 1210 aa31.21■■■□□ 2.59
FOXD4-201ENST00000382500 RUSC2Q8N2Y8 1516 aa31.2■■■□□ 2.59
FOXD4-201ENST00000382500 CUX1P39880 1505 aa31.12■■■□□ 2.57
FOXD4-201ENST00000382500 CSRNP3Q8WYN3 585 aa31.1■■■□□ 2.57
FOXD4-201ENST00000382500 HRCP23327 699 aa31■■■□□ 2.55
FOXD4-201ENST00000382500 PCGF6Q9BYE7 350 aa30.99■■■□□ 2.55
FOXD4-201ENST00000382500 GOLGA3Q08378 1498 aa30.92■■■□□ 2.54
FOXD4-201ENST00000382500 FANCD2Q9BXW9 1451 aa30.92■■■□□ 2.54
FOXD4-201ENST00000382500 KIF21BO75037 1637 aa30.9■■■□□ 2.54
FOXD4-201ENST00000382500 NESP48681 1621 aa30.88■■■□□ 2.53
FOXD4-201ENST00000382500 TNIKQ9UKE5 1360 aa30.88■■■□□ 2.53
FOXD4-201ENST00000382500 CEP164Q9UPV0 1460 aa30.88■■■□□ 2.53
FOXD4-201ENST00000382500 LAMC3Q9Y6N6 1575 aa30.87■■■□□ 2.53
FOXD4-201ENST00000382500 CEP162Q5TB80 1403 aa30.78■■■□□ 2.52
FOXD4-201ENST00000382500 UBTFP17480 764 aaKnown RBP30.75■■■□□ 2.51
FOXD4-201ENST00000382500 TRIM26Q12899 539 aaPredicted RBP30.74■■■□□ 2.51
FOXD4-201ENST00000382500 KIF27Q86VH2 1401 aa30.74■■■□□ 2.51
FOXD4-201ENST00000382500 FGD5Q6ZNL6 1462 aa30.72■■■□□ 2.51
FOXD4-201ENST00000382500 DNMBPQ6XZF7 1577 aa30.7■■■□□ 2.5
FOXD4-201ENST00000382500 RAPGEF2Q9Y4G8 1499 aa30.68■■■□□ 2.5
FOXD4-201ENST00000382500 PRXQ9BXM0 1461 aa30.64■■■□□ 2.5
FOXD4-201ENST00000382500 TOPBP1Q92547 1522 aa30.62■■■□□ 2.49
FOXD4-201ENST00000382500 PDS5BQ9NTI5 1447 aa30.62■■■□□ 2.49
FOXD4-201ENST00000382500 ERICH3Q5RHP9 1530 aa30.61■■■□□ 2.49
FOXD4-201ENST00000382500 CUX2O14529 1486 aa30.59■■■□□ 2.49
FOXD4-201ENST00000382500 URB2Q14146 1524 aaKnown RBP30.52■■■□□ 2.48
FOXD4-201ENST00000382500 POLA1P09884 1462 aaPredicted RBP30.51■■■□□ 2.48
FOXD4-201ENST00000382500 KIF21AQ7Z4S6 1674 aa30.48■■■□□ 2.47
FOXD4-201ENST00000382500 CLIP1P30622 1438 aa30.45■■■□□ 2.46
FOXD4-201ENST00000382500 ABCA10Q8WWZ4 1543 aa30.44■■■□□ 2.46
FOXD4-201ENST00000382500 RAD54L2Q9Y4B4 1467 aa30.43■■■□□ 2.46
FOXD4-201ENST00000382500 IGF1RP08069 1367 aa30.43■■■□□ 2.46
FOXD4-201ENST00000382500 WDR97A6NE52 1622 aa30.31■■■□□ 2.44
FOXD4-201ENST00000382500 CARMIL1Q5VZK9 1371 aa30.28■■■□□ 2.44
FOXD4-201ENST00000382500 PPARGC1BQ86YN6 1023 aaKnown RBP30.28■■■□□ 2.44
FOXD4-201ENST00000382500 VPS8Q8N3P4 1428 aa30.23■■■□□ 2.43
FOXD4-201ENST00000382500 MRC2Q9UBG0 1479 aa30.23■■■□□ 2.43
FOXD4-201ENST00000382500 RANGAP1P46060 587 aaPredicted RBP30.18■■■□□ 2.42
FOXD4-201ENST00000382500 ABCA5Q8WWZ7 1642 aa30.17■■■□□ 2.42
FOXD4-201ENST00000382500 CUL7Q14999 1698 aa30.15■■■□□ 2.42
FOXD4-201ENST00000382500 TARBP1Q13395 1621 aaKnown RBP30.13■■■□□ 2.41
FOXD4-201ENST00000382500 ARAP1Q96P48 1450 aa30.12■■■□□ 2.41
FOXD4-201ENST00000382500 ZEB1P37275 1124 aaPredicted RBP30.1■■■□□ 2.41
FOXD4-201ENST00000382500 TDRD9Q8NDG6 1382 aaKnown RBP30.09■■■□□ 2.41
FOXD4-201ENST00000382500 GAPVD1Q14C86 1478 aa30.08■■■□□ 2.41
FOXD4-201ENST00000382500 WDR62O43379 1518 aa30.05■■■□□ 2.4
FOXD4-201ENST00000382500 ARHGAP35Q9NRY4 1499 aa30.03■■■□□ 2.4
FOXD4-201ENST00000382500 TTBK1Q5TCY1 1321 aaPredicted RBP29.98■■■□□ 2.39
FOXD4-201ENST00000382500 ERCC6Q03468 1493 aa29.98■■■□□ 2.39
FOXD4-201ENST00000382500 IFT140Q96RY7 1462 aa29.91■■■□□ 2.38
FOXD4-201ENST00000382500 APLP2Q06481 763 aa29.9■■■□□ 2.38
FOXD4-201ENST00000382500 THOC2Q8NI27 1593 aaKnown RBP29.89■■■□□ 2.38
FOXD4-201ENST00000382500 PBRM1Q86U86 1689 aa29.87■■■□□ 2.37
FOXD4-201ENST00000382500 CTTNBP2Q8WZ74 1663 aa29.87■■■□□ 2.37
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms