RNA–Protein interactions for RNA: ENST00000279249.2

CDC42EP2-201, Transcript of CDC42 effector protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP2, Length 2,023 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP2-201ENST00000279249 NISCHQ9Y2I1 1504 aa44.67■■■■■ 4.74
CDC42EP2-201ENST00000279249 CCDC180Q9P1Z9 1646 aa39.29■■■■□ 3.88
CDC42EP2-201ENST00000279249 ABCC9O60706 1549 aa37.52■■■■□ 3.6
CDC42EP2-201ENST00000279249 ZCCHC6Q5VYS8 1495 aaKnown RBP37.44■■■■□ 3.58
CDC42EP2-201ENST00000279249 DCAF1Q9Y4B6 1507 aa36.96■■■■□ 3.51
CDC42EP2-201ENST00000279249 DCAF8L2P0C7V8 631 aa36.87■■■■□ 3.49
CDC42EP2-201ENST00000279249 MYO15BQ96JP2 1530 aa36.73■■■■□ 3.47
CDC42EP2-201ENST00000279249 NACADO15069 1562 aa36.65■■■■□ 3.46
CDC42EP2-201ENST00000279249 RB1CC1Q8TDY2 1594 aa36.46■■■■□ 3.43
CDC42EP2-201ENST00000279249 SCRIBQ14160 1630 aa35.99■■■■□ 3.35
CDC42EP2-201ENST00000279249 SHROOM4Q9ULL8 1493 aa35.95■■■■□ 3.35
CDC42EP2-201ENST00000279249 UNC13AQ9UPW8 1703 aa35.85■■■■□ 3.33
CDC42EP2-201ENST00000279249 BICRAQ9NZM4 1560 aa35.43■■■■□ 3.26
CDC42EP2-201ENST00000279249 PABPN1Q86U42 306 aaKnown RBP eCLIP35.22■■■■□ 3.23
CDC42EP2-201ENST00000279249 CECR2Q9BXF3 1484 aa34.75■■■■□ 3.15
CDC42EP2-201ENST00000279249 BAZ1AQ9NRL2 1556 aaPredicted RBP34.53■■■■□ 3.12
CDC42EP2-201ENST00000279249 MROH2BQ7Z745 1585 aa34.5■■■■□ 3.11
CDC42EP2-201ENST00000279249 SMARCA4P51532 1647 aa34.49■■■■□ 3.11
CDC42EP2-201ENST00000279249 RSF1Q96T23 1441 aaPredicted RBP34.41■■■■□ 3.1
CDC42EP2-201ENST00000279249 EIF4G1Q04637 1599 aaKnown RBP34.37■■■■□ 3.09
CDC42EP2-201ENST00000279249 SUPT5HO00267 1087 aaKnown RBP34.26■■■■□ 3.08
CDC42EP2-201ENST00000279249 WIZO95785 1651 aa34.22■■■■□ 3.07
CDC42EP2-201ENST00000279249 PEG3Q9GZU2 1588 aa34.11■■■■□ 3.05
CDC42EP2-201ENST00000279249 ATAD2BQ9ULI0 1458 aa34.01■■■■□ 3.04
CDC42EP2-201ENST00000279249 CC2D2AQ9P2K1 1620 aa34■■■■□ 3.03
CDC42EP2-201ENST00000279249 SMARCA2P51531 1590 aa33.98■■■■□ 3.03
CDC42EP2-201ENST00000279249 TOP2AP11388 1531 aaKnown RBP33.83■■■■□ 3.01
CDC42EP2-201ENST00000279249 NCAPD3P42695 1498 aa33.8■■■■□ 3
CDC42EP2-201ENST00000279249 BAZ1BQ9UIG0 1483 aaKnown RBP33.77■■■■□ 3
CDC42EP2-201ENST00000279249 HMGXB3Q12766 1538 aa33.76■■■□□ 2.99
CDC42EP2-201ENST00000279249 DNAJC5BQ9UF47 199 aa33.57■■■□□ 2.96
CDC42EP2-201ENST00000279249 CCDC88BA6NC98 1476 aa33.43■■■□□ 2.94
CDC42EP2-201ENST00000279249 CFTRP13569 1480 aa32.91■■■□□ 2.86
CDC42EP2-201ENST00000279249 CADPSQ9ULU8 1353 aa32.86■■■□□ 2.85
CDC42EP2-201ENST00000279249 PRDM2Q13029 1718 aa32.86■■■□□ 2.85
CDC42EP2-201ENST00000279249 NESP48681 1621 aa32.8■■■□□ 2.84
CDC42EP2-201ENST00000279249 LAMC3Q9Y6N6 1575 aa32.78■■■□□ 2.84
CDC42EP2-201ENST00000279249 ABCC8Q09428 1581 aa32.59■■■□□ 2.81
CDC42EP2-201ENST00000279249 CHIC1Q5VXU3 224 aa32.56■■■□□ 2.8
CDC42EP2-201ENST00000279249 FANCD2Q9BXW9 1451 aa32.52■■■□□ 2.8
CDC42EP2-201ENST00000279249 KIF21AQ7Z4S6 1674 aa32.48■■■□□ 2.79
CDC42EP2-201ENST00000279249 PDS5BQ9NTI5 1447 aa32.45■■■□□ 2.79
CDC42EP2-201ENST00000279249 WRNQ14191 1432 aaPredicted RBP eCLIP32.39■■■□□ 2.78
CDC42EP2-201ENST00000279249 CEP164Q9UPV0 1460 aa32.38■■■□□ 2.77
CDC42EP2-201ENST00000279249 SYNJ1O43426 1573 aa32.36■■■□□ 2.77
CDC42EP2-201ENST00000279249 CUX1P39880 1505 aa32.3■■■□□ 2.76
CDC42EP2-201ENST00000279249 BIVM-ERCC5R4GMW8 1640 aa32.28■■■□□ 2.76
CDC42EP2-201ENST00000279249 TOP2BQ02880 1626 aa32.26■■■□□ 2.75
CDC42EP2-201ENST00000279249 TRIM41Q8WV44 630 aa32.26■■■□□ 2.75
CDC42EP2-201ENST00000279249 ERCC6Q03468 1493 aa32.19■■■□□ 2.74
CDC42EP2-201ENST00000279249 URB2Q14146 1524 aaKnown RBP32.19■■■□□ 2.74
CDC42EP2-201ENST00000279249 DNMBPQ6XZF7 1577 aa32.18■■■□□ 2.74
CDC42EP2-201ENST00000279249 TOPBP1Q92547 1522 aa32.14■■■□□ 2.74
CDC42EP2-201ENST00000279249 MRC2Q9UBG0 1479 aa32.13■■■□□ 2.73
CDC42EP2-201ENST00000279249 THOC2Q8NI27 1593 aaKnown RBP32.09■■■□□ 2.73
CDC42EP2-201ENST00000279249 WDR62O43379 1518 aa32.02■■■□□ 2.72
CDC42EP2-201ENST00000279249 FGD5Q6ZNL6 1462 aa32.01■■■□□ 2.71
CDC42EP2-201ENST00000279249 POLA1P09884 1462 aaPredicted RBP31.94■■■□□ 2.7
CDC42EP2-201ENST00000279249 SOGA1O94964 1423 aa31.81■■■□□ 2.68
CDC42EP2-201ENST00000279249 RAD54L2Q9Y4B4 1467 aa31.81■■■□□ 2.68
CDC42EP2-201ENST00000279249 WDR97A6NE52 1622 aa31.78■■■□□ 2.68
CDC42EP2-201ENST00000279249 CUX2O14529 1486 aa31.77■■■□□ 2.68
CDC42EP2-201ENST00000279249 RUSC2Q8N2Y8 1516 aa31.75■■■□□ 2.67
CDC42EP2-201ENST00000279249 TARBP1Q13395 1621 aaKnown RBP31.75■■■□□ 2.67
CDC42EP2-201ENST00000279249 ABCA10Q8WWZ4 1543 aa31.72■■■□□ 2.67
CDC42EP2-201ENST00000279249 FAM9AQ8IZU1 332 aaPredicted RBP31.65■■■□□ 2.66
CDC42EP2-201ENST00000279249 IFT140Q96RY7 1462 aa31.64■■■□□ 2.66
CDC42EP2-201ENST00000279249 EEA1Q15075 1411 aa31.62■■■□□ 2.65
CDC42EP2-201ENST00000279249 KIF27Q86VH2 1401 aa31.6■■■□□ 2.65
CDC42EP2-201ENST00000279249 ABCA5Q8WWZ7 1642 aa31.57■■■□□ 2.64
CDC42EP2-201ENST00000279249 TDRD9Q8NDG6 1382 aaKnown RBP31.5■■■□□ 2.63
CDC42EP2-201ENST00000279249 ZNF608Q9ULD9 1512 aaPredicted RBP31.5■■■□□ 2.63
CDC42EP2-201ENST00000279249 CSRNP3Q8WYN3 585 aa31.45■■■□□ 2.63
CDC42EP2-201ENST00000279249 GAPVD1Q14C86 1478 aa31.44■■■□□ 2.62
CDC42EP2-201ENST00000279249 EIF4G3O43432 1585 aaKnown RBP31.43■■■□□ 2.62
CDC42EP2-201ENST00000279249 AQRO60306 1485 aaKnown RBP eCLIP31.42■■■□□ 2.62
CDC42EP2-201ENST00000279249 PBRM1Q86U86 1689 aa31.42■■■□□ 2.62
CDC42EP2-201ENST00000279249 IGF1RP08069 1367 aa31.38■■■□□ 2.61
CDC42EP2-201ENST00000279249 ERICH3Q5RHP9 1530 aa31.34■■■□□ 2.61
CDC42EP2-201ENST00000279249 KIF21BO75037 1637 aa31.33■■■□□ 2.61
CDC42EP2-201ENST00000279249 PRXQ9BXM0 1461 aa31.29■■■□□ 2.6
CDC42EP2-201ENST00000279249 GRIN2BQ13224 1484 aa31.28■■■□□ 2.6
CDC42EP2-201ENST00000279249 CUL7Q14999 1698 aa31.28■■■□□ 2.6
CDC42EP2-201ENST00000279249 LOC105371045A0A1W2PR82 267 aa31.27■■■□□ 2.6
CDC42EP2-201ENST00000279249 RAPGEF2Q9Y4G8 1499 aa31.21■■■□□ 2.59
CDC42EP2-201ENST00000279249 CARMIL1Q5VZK9 1371 aa31.21■■■□□ 2.59
CDC42EP2-201ENST00000279249 EHMT2Q96KQ7 1210 aa31.2■■■□□ 2.59
CDC42EP2-201ENST00000279249 ADAMTS12P58397 1594 aa31.18■■■□□ 2.58
CDC42EP2-201ENST00000279249 GOLGA3Q08378 1498 aa31.18■■■□□ 2.58
CDC42EP2-201ENST00000279249 SNAPC4Q5SXM2 1469 aa31.16■■■□□ 2.58
CDC42EP2-201ENST00000279249 MAGI1Q96QZ7 1491 aaPredicted RBP31.09■■■□□ 2.57
CDC42EP2-201ENST00000279249 FHAD1B1AJZ9 1412 aa31.09■■■□□ 2.57
CDC42EP2-201ENST00000279249 HRCP23327 699 aa31.02■■■□□ 2.56
CDC42EP2-201ENST00000279249 SYNJ2O15056 1496 aa30.97■■■□□ 2.55
CDC42EP2-201ENST00000279249 UBTFP17480 764 aaKnown RBP30.95■■■□□ 2.55
CDC42EP2-201ENST00000279249 TNIKQ9UKE5 1360 aa30.95■■■□□ 2.55
CDC42EP2-201ENST00000279249 GRIN2AQ12879 1464 aa30.91■■■□□ 2.54
CDC42EP2-201ENST00000279249 CTTNBP2Q8WZ74 1663 aa30.9■■■□□ 2.54
CDC42EP2-201ENST00000279249 CHD1O14646 1710 aa30.9■■■□□ 2.54
CDC42EP2-201ENST00000279249 CHMP7Q8WUX9 453 aaPredicted RBP30.83■■■□□ 2.53
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms