RNA–Protein interactions for RNA: ENST00000620216.4

PSMD8-210, Transcript of proteasome 26S subunit, non-ATPase 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSMD8, Length 1,538 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD8-210ENST00000620216 NISCHQ9Y2I1 1504 aa46.71■■■■■ 5.07
PSMD8-210ENST00000620216 CCDC180Q9P1Z9 1646 aa41.73■■■■■ 4.27
PSMD8-210ENST00000620216 ABCC9O60706 1549 aa41.16■■■■■ 4.18
PSMD8-210ENST00000620216 RB1CC1Q8TDY2 1594 aa39.44■■■■□ 3.91
PSMD8-210ENST00000620216 NACADO15069 1562 aa39.3■■■■□ 3.88
PSMD8-210ENST00000620216 DCAF8L2P0C7V8 631 aa39.13■■■■□ 3.85
PSMD8-210ENST00000620216 MYO15BQ96JP2 1530 aa38.93■■■■□ 3.82
PSMD8-210ENST00000620216 ZCCHC6Q5VYS8 1495 aaKnown RBP38.85■■■■□ 3.81
PSMD8-210ENST00000620216 DCAF1Q9Y4B6 1507 aa38.63■■■■□ 3.77
PSMD8-210ENST00000620216 UNC13AQ9UPW8 1703 aa38.59■■■■□ 3.77
PSMD8-210ENST00000620216 PABPN1Q86U42 306 aaKnown RBP eCLIP38.37■■■■□ 3.73
PSMD8-210ENST00000620216 BICRAQ9NZM4 1560 aa38.26■■■■□ 3.72
PSMD8-210ENST00000620216 DNAJC5BQ9UF47 199 aa38.07■■■■□ 3.69
PSMD8-210ENST00000620216 SCRIBQ14160 1630 aa38.05■■■■□ 3.68
PSMD8-210ENST00000620216 SHROOM4Q9ULL8 1493 aa37.82■■■■□ 3.64
PSMD8-210ENST00000620216 EIF4G1Q04637 1599 aaKnown RBP37.29■■■■□ 3.56
PSMD8-210ENST00000620216 CC2D2AQ9P2K1 1620 aa37.24■■■■□ 3.55
PSMD8-210ENST00000620216 CECR2Q9BXF3 1484 aa37.02■■■■□ 3.52
PSMD8-210ENST00000620216 SMARCA4P51532 1647 aa36.35■■■■□ 3.41
PSMD8-210ENST00000620216 BAZ1AQ9NRL2 1556 aaPredicted RBP36.24■■■■□ 3.39
PSMD8-210ENST00000620216 NCAPD3P42695 1498 aa36.24■■■■□ 3.39
PSMD8-210ENST00000620216 ATAD2BQ9ULI0 1458 aa36.22■■■■□ 3.39
PSMD8-210ENST00000620216 SMARCA2P51531 1590 aa36.17■■■■□ 3.38
PSMD8-210ENST00000620216 HMGXB3Q12766 1538 aa36.06■■■■□ 3.36
PSMD8-210ENST00000620216 MROH2BQ7Z745 1585 aa35.99■■■■□ 3.35
PSMD8-210ENST00000620216 PEG3Q9GZU2 1588 aa35.99■■■■□ 3.35
PSMD8-210ENST00000620216 BAZ1BQ9UIG0 1483 aaKnown RBP35.91■■■■□ 3.34
PSMD8-210ENST00000620216 WIZO95785 1651 aa35.61■■■■□ 3.29
PSMD8-210ENST00000620216 ERCC6Q03468 1493 aa35.51■■■■□ 3.28
PSMD8-210ENST00000620216 NESP48681 1621 aa35.51■■■■□ 3.27
PSMD8-210ENST00000620216 RSF1Q96T23 1441 aaPredicted RBP35.42■■■■□ 3.26
PSMD8-210ENST00000620216 LAMC3Q9Y6N6 1575 aa35.38■■■■□ 3.25
PSMD8-210ENST00000620216 CUX2O14529 1486 aa35.28■■■■□ 3.24
PSMD8-210ENST00000620216 TOP2AP11388 1531 aaKnown RBP35.2■■■■□ 3.23
PSMD8-210ENST00000620216 CADPSQ9ULU8 1353 aa35.16■■■■□ 3.22
PSMD8-210ENST00000620216 KIF21AQ7Z4S6 1674 aa35.13■■■■□ 3.21
PSMD8-210ENST00000620216 PDS5BQ9NTI5 1447 aa35.12■■■■□ 3.21
PSMD8-210ENST00000620216 THOC2Q8NI27 1593 aaKnown RBP35.09■■■■□ 3.21
PSMD8-210ENST00000620216 CFTRP13569 1480 aa34.89■■■■□ 3.18
PSMD8-210ENST00000620216 MRC2Q9UBG0 1479 aa34.81■■■■□ 3.16
PSMD8-210ENST00000620216 FANCD2Q9BXW9 1451 aa34.78■■■■□ 3.16
PSMD8-210ENST00000620216 CEP164Q9UPV0 1460 aa34.78■■■■□ 3.16
PSMD8-210ENST00000620216 CCDC88BA6NC98 1476 aa34.77■■■■□ 3.16
PSMD8-210ENST00000620216 WDR62O43379 1518 aa34.73■■■■□ 3.15
PSMD8-210ENST00000620216 PRDM2Q13029 1718 aa34.67■■■■□ 3.14
PSMD8-210ENST00000620216 DNAJC5Q9H3Z4 198 aa34.58■■■■□ 3.13
PSMD8-210ENST00000620216 URB2Q14146 1524 aaKnown RBP34.46■■■■□ 3.11
PSMD8-210ENST00000620216 SUPT5HO00267 1087 aaKnown RBP34.43■■■■□ 3.1
PSMD8-210ENST00000620216 TOPBP1Q92547 1522 aa34.19■■■■□ 3.06
PSMD8-210ENST00000620216 ABCC8Q09428 1581 aa34.15■■■■□ 3.06
PSMD8-210ENST00000620216 DNMBPQ6XZF7 1577 aa34.13■■■■□ 3.05
PSMD8-210ENST00000620216 IFT140Q96RY7 1462 aa34.06■■■■□ 3.04
PSMD8-210ENST00000620216 ZNF608Q9ULD9 1512 aaPredicted RBP33.94■■■■□ 3.02
PSMD8-210ENST00000620216 POLA1P09884 1462 aaPredicted RBP33.87■■■■□ 3.01
PSMD8-210ENST00000620216 TARBP1Q13395 1621 aaKnown RBP33.86■■■■□ 3.01
PSMD8-210ENST00000620216 EIF4G3O43432 1585 aaKnown RBP33.83■■■■□ 3.01
PSMD8-210ENST00000620216 CUX1P39880 1505 aa33.79■■■■□ 3
PSMD8-210ENST00000620216 FGD5Q6ZNL6 1462 aa33.74■■■□□ 2.99
PSMD8-210ENST00000620216 RAD54L2Q9Y4B4 1467 aa33.72■■■□□ 2.99
PSMD8-210ENST00000620216 SOGA1O94964 1423 aa33.7■■■□□ 2.99
PSMD8-210ENST00000620216 OSCARQ8IYS5 282 aa33.69■■■□□ 2.98
PSMD8-210ENST00000620216 AQRO60306 1485 aaKnown RBP eCLIP33.69■■■□□ 2.989e-9■■■■■ 35.9
PSMD8-210ENST00000620216 WDR97A6NE52 1622 aa33.58■■■□□ 2.97
PSMD8-210ENST00000620216 TDRD9Q8NDG6 1382 aaKnown RBP33.55■■■□□ 2.96
PSMD8-210ENST00000620216 CHD1O14646 1710 aa33.48■■■□□ 2.95
PSMD8-210ENST00000620216 BIVM-ERCC5R4GMW8 1640 aa33.43■■■□□ 2.94
PSMD8-210ENST00000620216 WRNQ14191 1432 aaPredicted RBP eCLIP33.42■■■□□ 2.94
PSMD8-210ENST00000620216 TOP2BQ02880 1626 aa33.41■■■□□ 2.94
PSMD8-210ENST00000620216 SNAPC4Q5SXM2 1469 aa33.4■■■□□ 2.94
PSMD8-210ENST00000620216 SYNJ1O43426 1573 aa33.39■■■□□ 2.94
PSMD8-210ENST00000620216 ABCA10Q8WWZ4 1543 aa33.39■■■□□ 2.94
PSMD8-210ENST00000620216 GRIN2BQ13224 1484 aa33.37■■■□□ 2.93
PSMD8-210ENST00000620216 FBLN2P98095 1184 aa33.34■■■□□ 2.93
PSMD8-210ENST00000620216 PBRM1Q86U86 1689 aa33.34■■■□□ 2.93
PSMD8-210ENST00000620216 MAGI1Q96QZ7 1491 aaPredicted RBP33.33■■■□□ 2.93
PSMD8-210ENST00000620216 ABCA5Q8WWZ7 1642 aa33.32■■■□□ 2.93
PSMD8-210ENST00000620216 GAPVD1Q14C86 1478 aa33.32■■■□□ 2.93
PSMD8-210ENST00000620216 TRIM41Q8WV44 630 aa33.31■■■□□ 2.92
PSMD8-210ENST00000620216 RIMBP3CA6NJZ7 1639 aa33.27■■■□□ 2.92
PSMD8-210ENST00000620216 RIMBP3BA6NNM3 1639 aa33.27■■■□□ 2.92
PSMD8-210ENST00000620216 RIMBP3Q9UFD9 1639 aa33.27■■■□□ 2.92
PSMD8-210ENST00000620216 ARHGEF11O15085 1522 aa33.21■■■□□ 2.91
PSMD8-210ENST00000620216 SYNJ2O15056 1496 aa33.2■■■□□ 2.91
PSMD8-210ENST00000620216 CHMP7Q8WUX9 453 aaPredicted RBP33.19■■■□□ 2.9
PSMD8-210ENST00000620216 CLASP1Q7Z460 1538 aa33.09■■■□□ 2.89
PSMD8-210ENST00000620216 ADAMTS12P58397 1594 aa33.03■■■□□ 2.88
PSMD8-210ENST00000620216 ERICH3Q5RHP9 1530 aa32.99■■■□□ 2.87
PSMD8-210ENST00000620216 GRIN2AQ12879 1464 aa32.95■■■□□ 2.86
PSMD8-210ENST00000620216 FHAD1B1AJZ9 1412 aa32.92■■■□□ 2.86
PSMD8-210ENST00000620216 ARAP1Q96P48 1450 aa32.91■■■□□ 2.86
PSMD8-210ENST00000620216 CYB5RLQ6IPT4 315 aa32.87■■■□□ 2.85
PSMD8-210ENST00000620216 CEP170Q5SW79 1584 aa32.83■■■□□ 2.85
PSMD8-210ENST00000620216 NUP160Q12769 1436 aa32.81■■■□□ 2.84
PSMD8-210ENST00000620216 KIF27Q86VH2 1401 aa32.75■■■□□ 2.83
PSMD8-210ENST00000620216 CUL7Q14999 1698 aa32.64■■■□□ 2.82
PSMD8-210ENST00000620216 IGF1RP08069 1367 aa32.64■■■□□ 2.82
PSMD8-210ENST00000620216 SHROOM2Q13796 1616 aa32.64■■■□□ 2.81
PSMD8-210ENST00000620216 ERCC6L2Q5T890 1561 aa32.6■■■□□ 2.81
PSMD8-210ENST00000620216 RUSC2Q8N2Y8 1516 aa32.57■■■□□ 2.8
PSMD8-210ENST00000620216 CARMIL1Q5VZK9 1371 aa32.45■■■□□ 2.79
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms