RNA–Protein interactions for RNA: ENST00000563425.2

CDH5-204, Transcript of cadherin 5, humanhuman

TSL 5 BASIC

Gene CDH5, Length 1,932 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH5-204ENST00000563425 NISCHQ9Y2I1 1504 aa42.43■■■■■ 4.38
CDH5-204ENST00000563425 CCDC180Q9P1Z9 1646 aa36.64■■■■□ 3.46
CDH5-204ENST00000563425 ZCCHC6Q5VYS8 1495 aaKnown RBP35.79■■■■□ 3.32
CDH5-204ENST00000563425 SHROOM4Q9ULL8 1493 aa35.23■■■■□ 3.23
CDH5-204ENST00000563425 DCAF1Q9Y4B6 1507 aa35.03■■■■□ 3.2
CDH5-204ENST00000563425 DCAF8L2P0C7V8 631 aa34.83■■■■□ 3.17
CDH5-204ENST00000563425 MYO15BQ96JP2 1530 aa34.3■■■■□ 3.08
CDH5-204ENST00000563425 SUPT5HO00267 1087 aaKnown RBP34.26■■■■□ 3.07
CDH5-204ENST00000563425 ABCC9O60706 1549 aa34■■■■□ 3.03
CDH5-204ENST00000563425 NACADO15069 1562 aa33.91■■■■□ 3.02
CDH5-204ENST00000563425 SCRIBQ14160 1630 aa33.87■■■■□ 3.01
CDH5-204ENST00000563425 RB1CC1Q8TDY2 1594 aa33.45■■■□□ 2.95
CDH5-204ENST00000563425 RSF1Q96T23 1441 aaPredicted RBP33.22■■■□□ 2.91
CDH5-204ENST00000563425 CHIC1Q5VXU3 224 aa33.18■■■□□ 2.9
CDH5-204ENST00000563425 UNC13AQ9UPW8 1703 aa33■■■□□ 2.87
CDH5-204ENST00000563425 CECR2Q9BXF3 1484 aa32.95■■■□□ 2.87
CDH5-204ENST00000563425 MROH2BQ7Z745 1585 aa32.85■■■□□ 2.85
CDH5-204ENST00000563425 BAZ1AQ9NRL2 1556 aaPredicted RBP32.69■■■□□ 2.82
CDH5-204ENST00000563425 WIZO95785 1651 aa32.68■■■□□ 2.82
CDH5-204ENST00000563425 BICRAQ9NZM4 1560 aa32.5■■■□□ 2.79
CDH5-204ENST00000563425 SMARCA4P51532 1647 aa32.49■■■□□ 2.79
CDH5-204ENST00000563425 TOP2AP11388 1531 aaKnown RBP32.26■■■□□ 2.76
CDH5-204ENST00000563425 PABPN1Q86U42 306 aaKnown RBP eCLIP32.22■■■□□ 2.75
CDH5-204ENST00000563425 TRIM41Q8WV44 630 aa32.11■■■□□ 2.73
CDH5-204ENST00000563425 EIF4G1Q04637 1599 aaKnown RBP32.1■■■□□ 2.73
CDH5-204ENST00000563425 SMARCA2P51531 1590 aa32.03■■■□□ 2.72
CDH5-204ENST00000563425 PEG3Q9GZU2 1588 aa32.02■■■□□ 2.72
CDH5-204ENST00000563425 LOC105371045A0A1W2PR82 267 aa31.99■■■□□ 2.71
CDH5-204ENST00000563425 CCDC88BA6NC98 1476 aa31.98■■■□□ 2.71
CDH5-204ENST00000563425 ATAD2BQ9ULI0 1458 aa31.72■■■□□ 2.67
CDH5-204ENST00000563425 ABCC8Q09428 1581 aa31.61■■■□□ 2.65
CDH5-204ENST00000563425 FAM9AQ8IZU1 332 aaPredicted RBP31.6■■■□□ 2.65
CDH5-204ENST00000563425 BAZ1BQ9UIG0 1483 aaKnown RBP31.59■■■□□ 2.65
CDH5-204ENST00000563425 PCGF6Q9BYE7 350 aa31.33■■■□□ 2.61
CDH5-204ENST00000563425 HMGXB3Q12766 1538 aa31.33■■■□□ 2.61
CDH5-204ENST00000563425 NCAPD3P42695 1498 aa31.28■■■□□ 2.6
CDH5-204ENST00000563425 WRNQ14191 1432 aaPredicted RBP eCLIP31.23■■■□□ 2.59
CDH5-204ENST00000563425 EHMT2Q96KQ7 1210 aa31.18■■■□□ 2.58
CDH5-204ENST00000563425 SOGA1O94964 1423 aa31.14■■■□□ 2.58
CDH5-204ENST00000563425 EEA1Q15075 1411 aa31.14■■■□□ 2.58
CDH5-204ENST00000563425 SYNJ1O43426 1573 aa31.14■■■□□ 2.58
CDH5-204ENST00000563425 TRIM26Q12899 539 aaPredicted RBP31.08■■■□□ 2.57
CDH5-204ENST00000563425 HRCP23327 699 aa31.04■■■□□ 2.56
CDH5-204ENST00000563425 RUSC2Q8N2Y8 1516 aa31■■■□□ 2.55
CDH5-204ENST00000563425 CSRNP3Q8WYN3 585 aa30.93■■■□□ 2.54
CDH5-204ENST00000563425 TOP2BQ02880 1626 aa30.92■■■□□ 2.54
CDH5-204ENST00000563425 BIVM-ERCC5R4GMW8 1640 aa30.9■■■□□ 2.54
CDH5-204ENST00000563425 TNIKQ9UKE5 1360 aa30.84■■■□□ 2.53
CDH5-204ENST00000563425 PRDM2Q13029 1718 aa30.84■■■□□ 2.53
CDH5-204ENST00000563425 CFTRP13569 1480 aa30.83■■■□□ 2.53
CDH5-204ENST00000563425 CC2D2AQ9P2K1 1620 aa30.8■■■□□ 2.52
CDH5-204ENST00000563425 GOLGA3Q08378 1498 aa30.79■■■□□ 2.52
CDH5-204ENST00000563425 KIF21BO75037 1637 aa30.78■■■□□ 2.52
CDH5-204ENST00000563425 CEP162Q5TB80 1403 aa30.76■■■□□ 2.52
CDH5-204ENST00000563425 CEP164Q9UPV0 1460 aa30.7■■■□□ 2.51
CDH5-204ENST00000563425 CUX1P39880 1505 aa30.67■■■□□ 2.5
CDH5-204ENST00000563425 UBTFP17480 764 aaKnown RBP30.63■■■□□ 2.49
CDH5-204ENST00000563425 CADPSQ9ULU8 1353 aa30.55■■■□□ 2.48
CDH5-204ENST00000563425 RAPGEF2Q9Y4G8 1499 aa30.46■■■□□ 2.47
CDH5-204ENST00000563425 PPARGC1BQ86YN6 1023 aaKnown RBP30.45■■■□□ 2.46
CDH5-204ENST00000563425 ERICH3Q5RHP9 1530 aa30.4■■■□□ 2.46
CDH5-204ENST00000563425 PRXQ9BXM0 1461 aa30.37■■■□□ 2.45
CDH5-204ENST00000563425 KIF27Q86VH2 1401 aa30.35■■■□□ 2.45
CDH5-204ENST00000563425 CLIP1P30622 1438 aa30.34■■■□□ 2.45
CDH5-204ENST00000563425 FANCD2Q9BXW9 1451 aa30.24■■■□□ 2.43
CDH5-204ENST00000563425 ZEB1P37275 1124 aaPredicted RBP30.2■■■□□ 2.43
CDH5-204ENST00000563425 FGD5Q6ZNL6 1462 aa30.19■■■□□ 2.42
CDH5-204ENST00000563425 VPS8Q8N3P4 1428 aa30.18■■■□□ 2.42
CDH5-204ENST00000563425 CUX2O14529 1486 aa30.13■■■□□ 2.41
CDH5-204ENST00000563425 DNMBPQ6XZF7 1577 aa30.12■■■□□ 2.41
CDH5-204ENST00000563425 LAMC3Q9Y6N6 1575 aa30.12■■■□□ 2.41
CDH5-204ENST00000563425 NESP48681 1621 aa30.12■■■□□ 2.41
CDH5-204ENST00000563425 TTBK1Q5TCY1 1321 aaPredicted RBP30.04■■■□□ 2.4
CDH5-204ENST00000563425 IGF1RP08069 1367 aa30.03■■■□□ 2.4
CDH5-204ENST00000563425 TOPBP1Q92547 1522 aa30.02■■■□□ 2.4
CDH5-204ENST00000563425 ARAP1Q96P48 1450 aa29.97■■■□□ 2.39
CDH5-204ENST00000563425 RANGAP1P46060 587 aaPredicted RBP29.96■■■□□ 2.39
CDH5-204ENST00000563425 POLA1P09884 1462 aaPredicted RBP29.93■■■□□ 2.38
CDH5-204ENST00000563425 ABCA10Q8WWZ4 1543 aa29.92■■■□□ 2.38
CDH5-204ENST00000563425 CARMIL1Q5VZK9 1371 aa29.88■■■□□ 2.37
CDH5-204ENST00000563425 RAD54L2Q9Y4B4 1467 aa29.86■■■□□ 2.37
CDH5-204ENST00000563425 APLP2Q06481 763 aa29.86■■■□□ 2.37
CDH5-204ENST00000563425 URB2Q14146 1524 aaKnown RBP29.85■■■□□ 2.37
CDH5-204ENST00000563425 WDR97A6NE52 1622 aa29.83■■■□□ 2.37
CDH5-204ENST00000563425 PDS5BQ9NTI5 1447 aa29.83■■■□□ 2.37
CDH5-204ENST00000563425 DNAJC5BQ9UF47 199 aa29.83■■■□□ 2.37
CDH5-204ENST00000563425 ARHGAP35Q9NRY4 1499 aa29.82■■■□□ 2.36
CDH5-204ENST00000563425 KIF21AQ7Z4S6 1674 aa29.81■■■□□ 2.36
CDH5-204ENST00000563425 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.8■■■□□ 2.36
CDH5-204ENST00000563425 CUL7Q14999 1698 aa29.75■■■□□ 2.35
CDH5-204ENST00000563425 CCER1Q8TC90 406 aaPredicted RBP29.74■■■□□ 2.35
CDH5-204ENST00000563425 ABCA5Q8WWZ7 1642 aa29.65■■■□□ 2.34
CDH5-204ENST00000563425 CTTNBP2Q8WZ74 1663 aa29.6■■■□□ 2.33
CDH5-204ENST00000563425 TARBP1Q13395 1621 aaKnown RBP29.54■■■□□ 2.32
CDH5-204ENST00000563425 KANK4Q5T7N3 995 aaPredicted RBP29.53■■■□□ 2.32
CDH5-204ENST00000563425 GAPVD1Q14C86 1478 aa29.51■■■□□ 2.32
CDH5-204ENST00000563425 MAP3K1Q13233 1512 aa29.5■■■□□ 2.31
CDH5-204ENST00000563425 HNRNPUL2Q1KMD3 747 aaKnown RBP29.49■■■□□ 2.31
CDH5-204ENST00000563425 TDRD9Q8NDG6 1382 aaKnown RBP29.49■■■□□ 2.31
CDH5-204ENST00000563425 EFCAB5A4FU69 1503 aa29.47■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms