Protein–RNA interactions for Protein: Q71RC2

LARP4, La-related protein 4, humanhuman

Known RBP eCLIP

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LARP4Q71RC2 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.085e-22■■□□□ 13.5
LARP4Q71RC2 SRSF11-202ENST00000370950 3784 ntAPPRIS P3 TSL 1 (best) BASIC7.12□□□□□ -1.275e-22■■□□□ 13.5
LARP4Q71RC2 SRSF11-208ENST00000463859 1035 ntTSL 56.43□□□□□ -1.385e-22■■□□□ 13.5
LARP4Q71RC2 SRSF11-214ENST00000484162 4008 ntTSL 1 (best)6.35□□□□□ -1.395e-22■■□□□ 13.5
LARP4Q71RC2 SRSF11-205ENST00000460795 528 ntTSL 25.7□□□□□ -1.55e-22■■□□□ 13.5
LARP4Q71RC2 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC5.27□□□□□ -1.575e-22■■□□□ 13.5
LARP4Q71RC2 SRSF11-216ENST00000489188 784 ntTSL 24.7□□□□□ -1.665e-22■■□□□ 13.5
LARP4Q71RC2 SRSF11-206ENST00000461935 3501 ntTSL 1 (best)3.86□□□□□ -1.795e-22■■□□□ 13.5
LARP4Q71RC2 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC16.78■□□□□ 0.281e-9■■□□□ 13.5
LARP4Q71RC2 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC13.83□□□□□ -0.22e-6■■□□□ 13.5
LARP4Q71RC2 C19orf53-202ENST00000588234 873 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.342e-6■■□□□ 13.5
LARP4Q71RC2 C19orf53-203ENST00000588841 499 ntTSL 27.84□□□□□ -1.152e-6■■□□□ 13.5
LARP4Q71RC2 C19orf53-204ENST00000588858 666 ntTSL 37.64□□□□□ -1.192e-6■■□□□ 13.5
LARP4Q71RC2 C19orf53-201ENST00000221576 504 ntTSL 25.53□□□□□ -1.522e-6■■□□□ 13.5
LARP4Q71RC2 LAMTOR4-204ENST00000466498 371 ntTSL 212.85□□□□□ -0.352e-8■■□□□ 13.5
LARP4Q71RC2 LGMN-213ENST00000556790 352 ntTSL 25.77□□□□□ -1.492e-8■■□□□ 13.5
LARP4Q71RC2 MAN2A2-221ENST00000560451 5124 ntTSL 1 (best)18.79■□□□□ 0.62e-6■■□□□ 13.5
LARP4Q71RC2 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.112e-6■■□□□ 13.5
LARP4Q71RC2 MAN2A2-204ENST00000558161 4918 ntTSL 1 (best)11.63□□□□□ -0.552e-6■■□□□ 13.5
LARP4Q71RC2 MAN2A2-201ENST00000360468 6268 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.682e-6■■□□□ 13.5
LARP4Q71RC2 MAN2A2-215ENST00000559704 449 ntTSL 34.33□□□□□ -1.722e-6■■□□□ 13.5
LARP4Q71RC2 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC22.17■■□□□ 1.142e-9■■□□□ 13.5
LARP4Q71RC2 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC22.17■■□□□ 1.142e-9■■□□□ 13.5
LARP4Q71RC2 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC22.17■■□□□ 1.142e-9■■□□□ 13.5
LARP4Q71RC2 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC19.58■□□□□ 0.722e-9■■□□□ 13.5
LARP4Q71RC2 MPC1-205ENST00000487218 918 ntTSL 57.82□□□□□ -1.162e-9■■□□□ 13.5
LARP4Q71RC2 MPC1-203ENST00000366868 572 ntTSL 35.15□□□□□ -1.592e-9■■□□□ 13.5
LARP4Q71RC2 MPC1-204ENST00000475708 651 ntTSL 51.98□□□□□ -2.092e-9■■□□□ 13.5
LARP4Q71RC2 PSMA6-215ENST00000622405 978 ntTSL 2 BASIC12.4□□□□□ -0.427e-26■■□□□ 13.5
LARP4Q71RC2 PSMA6-206ENST00000554541 925 ntTSL 210.57□□□□□ -0.727e-26■■□□□ 13.5
LARP4Q71RC2 PSMA6-211ENST00000555764 1002 ntTSL 2 BASIC9.44□□□□□ -0.97e-26■■□□□ 13.5
LARP4Q71RC2 PSMA6-202ENST00000540871 912 ntTSL 2 BASIC7.53□□□□□ -1.27e-26■■□□□ 13.5
LARP4Q71RC2 PSMA6-209ENST00000554961 814 ntTSL 27.36□□□□□ -1.237e-26■■□□□ 13.5
LARP4Q71RC2 PSMA6-205ENST00000554457 4730 nt6.73□□□□□ -1.337e-26■■□□□ 13.5
LARP4Q71RC2 PSMA6-214ENST00000556506 763 ntTSL 5 BASIC6.65□□□□□ -1.347e-26■■□□□ 13.5
LARP4Q71RC2 PSMA6-204ENST00000553809 879 ntAPPRIS ALT1 TSL 3 BASIC6.65□□□□□ -1.347e-26■■□□□ 13.5
LARP4Q71RC2 PSMA6-201ENST00000261479 1029 ntAPPRIS P2 TSL 1 (best) BASIC6.11□□□□□ -1.437e-26■■□□□ 13.5
LARP4Q71RC2 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.557e-26■■□□□ 13.5
LARP4Q71RC2 PSMA6-213ENST00000556221 423 ntTSL 34.52□□□□□ -1.697e-26■■□□□ 13.5
LARP4Q71RC2 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC15.24■□□□□ 0.033e-6■■□□□ 13.5
LARP4Q71RC2 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC14.88□□□□□ -0.033e-6■■□□□ 13.5
LARP4Q71RC2 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.253e-6■■□□□ 13.5
LARP4Q71RC2 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC13.45□□□□□ -0.263e-6■■□□□ 13.5
LARP4Q71RC2 MRPL34-206ENST00000602206 603 ntTSL 3 BASIC11.37□□□□□ -0.593e-6■■□□□ 13.5
LARP4Q71RC2 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.249e-7■■□□□ 13.5
LARP4Q71RC2 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.999e-7■■□□□ 13.5
LARP4Q71RC2 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC22.33■■□□□ 1.172e-7■■□□□ 13.5
LARP4Q71RC2 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.853e-32■■□□□ 13.5
LARP4Q71RC2 ATP6V0B-209ENST00000496131 962 ntTSL 312.97□□□□□ -0.337e-8■■□□□ 13.5
LARP4Q71RC2 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.538e-8■■□□□ 13.4
LARP4Q71RC2 RPS14-206ENST00000519855 398 ntTSL 212.28□□□□□ -0.442e-15■■□□□ 13.4
LARP4Q71RC2 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.326e-9■■□□□ 13.4
LARP4Q71RC2 CDC34-205ENST00000606065 1062 ntTSL 520.39■□□□□ 0.856e-9■■□□□ 13.4
LARP4Q71RC2 CDC34-206ENST00000606400 899 ntTSL 217.76■□□□□ 0.436e-9■■□□□ 13.4
LARP4Q71RC2 CDC34-202ENST00000586283 1147 ntTSL 316.79■□□□□ 0.286e-9■■□□□ 13.4
LARP4Q71RC2 SLC3A2-212ENST00000538682 1368 ntTSL 1 (best)13.64□□□□□ -0.239e-8■■□□□ 13.4
LARP4Q71RC2 SLC3A2-215ENST00000539891 1300 ntTSL 1 (best)9.87□□□□□ -0.839e-8■■□□□ 13.4
LARP4Q71RC2 SLC3A2-207ENST00000535768 597 ntTSL 59.27□□□□□ -0.939e-8■■□□□ 13.4
LARP4Q71RC2 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.35e-9■■□□□ 13.4
LARP4Q71RC2 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.975e-9■■□□□ 13.4
LARP4Q71RC2 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.155e-9■■□□□ 13.4
LARP4Q71RC2 CHST15-201ENST00000346248 4810 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.415e-9■■□□□ 13.4
LARP4Q71RC2 CHST15-202ENST00000435907 4820 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.475e-9■■□□□ 13.4
LARP4Q71RC2 CHST15-205ENST00000628426 3553 ntTSL 2 BASIC11.37□□□□□ -0.595e-9■■□□□ 13.4
LARP4Q71RC2 CHST15-203ENST00000462406 826 ntTSL 26.73□□□□□ -1.335e-9■■□□□ 13.4
LARP4Q71RC2 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC18.88■□□□□ 0.612e-7■■□□□ 13.4
LARP4Q71RC2 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.082e-7■■□□□ 13.4
LARP4Q71RC2 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC14.28□□□□□ -0.122e-7■■□□□ 13.4
LARP4Q71RC2 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.232e-7■■□□□ 13.4
LARP4Q71RC2 RNF167-216ENST00000576965 599 ntTSL 513.27□□□□□ -0.292e-7■■□□□ 13.4
LARP4Q71RC2 RNF167-206ENST00000572382 989 ntTSL 213.12□□□□□ -0.312e-7■■□□□ 13.4
LARP4Q71RC2 RNF167-207ENST00000572430 1511 ntAPPRIS P3 TSL 5 BASIC11.48□□□□□ -0.572e-7■■□□□ 13.4
LARP4Q71RC2 NSFL1C-213ENST00000555944 2588 ntTSL 217.81■□□□□ 0.442e-17■■□□□ 13.4
LARP4Q71RC2 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC17.48■□□□□ 0.392e-17■■□□□ 13.4
LARP4Q71RC2 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC16.91■□□□□ 0.32e-17■■□□□ 13.4
LARP4Q71RC2 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.222e-17■■□□□ 13.4
LARP4Q71RC2 NSFL1C-204ENST00000461211 3799 ntTSL 56.84□□□□□ -1.312e-17■■□□□ 13.4
LARP4Q71RC2 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.725e-11■■□□□ 13.4
LARP4Q71RC2 TBCB-205ENST00000585746 875 ntTSL 3 BASIC16.16■□□□□ 0.185e-11■■□□□ 13.4
LARP4Q71RC2 TBCB-203ENST00000468156 630 ntTSL 216.03■□□□□ 0.165e-11■■□□□ 13.4
LARP4Q71RC2 TBCB-207ENST00000586868 466 ntTSL 3 BASIC10.53□□□□□ -0.725e-11■■□□□ 13.4
LARP4Q71RC2 SLIRP-208ENST00000556956 450 ntTSL 22.98□□□□□ -1.931e-11■■□□□ 13.4
LARP4Q71RC2 CHMP1A-204ENST00000547687 2007 ntTSL 1 (best)16.27■□□□□ 0.21e-7■■□□□ 13.4
LARP4Q71RC2 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC16.08■□□□□ 0.171e-7■■□□□ 13.4
LARP4Q71RC2 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.141e-7■■□□□ 13.4
LARP4Q71RC2 ANKRD11-215ENST00000568512 294 ntTSL 28.78□□□□□ -17e-7■■□□□ 13.4
LARP4Q71RC2 PPP4C-209ENST00000566749 1490 ntTSL 522.58■■□□□ 1.27e-7■■□□□ 13.4
LARP4Q71RC2 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.147e-7■■□□□ 13.4
LARP4Q71RC2 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC21.4■■□□□ 1.027e-7■■□□□ 13.4
LARP4Q71RC2 PPP4C-205ENST00000563200 1447 ntTSL 519.84■□□□□ 0.777e-7■■□□□ 13.4
LARP4Q71RC2 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.367e-7■■□□□ 13.4
LARP4Q71RC2 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC15.11■□□□□ 0.011e-10■■□□□ 13.4
LARP4Q71RC2 SLC25A10-207ENST00000574129 1523 ntTSL 529.57■■■□□ 2.325e-11■■□□□ 13.4
LARP4Q71RC2 CLU-208ENST00000521770 520 ntTSL 27.73□□□□□ -1.176e-26■■□□□ 13.4
LARP4Q71RC2 RPL36-208ENST00000590786 907 ntTSL 218.27■□□□□ 0.521e-12■■□□□ 13.4
LARP4Q71RC2 SYS1-DBNDD2-201ENST00000419593 1313 ntAPPRIS ALT2 TSL 215.23■□□□□ 0.033e-6■■□□□ 13.4
LARP4Q71RC2 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.279e-8■■□□□ 13.4
LARP4Q71RC2 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC14.09□□□□□ -0.159e-8■■□□□ 13.4
LARP4Q71RC2 BAX-205ENST00000391871 687 ntTSL 5 BASIC13.39□□□□□ -0.279e-8■■□□□ 13.4
LARP4Q71RC2 LRPAP1-202ENST00000500728 7819 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.521e-9■■□□□ 13.4
Retrieved 100 of 15,922 protein–RNA pairs in 418.7 ms