RNA–Protein interactions for RNA: ENST00000588858.5

C19orf53-204, Transcript of chromosome 19 open reading frame 53, humanhuman

TSL 3

Gene C19orf53, Length 666 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C19orf53-204ENST00000588858 NISCHQ9Y2I1 1504 aa19.35■□□□□ 0.69
C19orf53-204ENST00000588858 CCDC180Q9P1Z9 1646 aa17.13■□□□□ 0.33
C19orf53-204ENST00000588858 ABCC9O60706 1549 aa16.4■□□□□ 0.22
C19orf53-204ENST00000588858 ZCCHC6Q5VYS8 1495 aaKnown RBP16.19■□□□□ 0.18
C19orf53-204ENST00000588858 MYO15BQ96JP2 1530 aa16.14■□□□□ 0.18
C19orf53-204ENST00000588858 DCAF1Q9Y4B6 1507 aa16.14■□□□□ 0.17
C19orf53-204ENST00000588858 NACADO15069 1562 aa16.05■□□□□ 0.16
C19orf53-204ENST00000588858 RB1CC1Q8TDY2 1594 aa15.98■□□□□ 0.15
C19orf53-204ENST00000588858 DCAF8L2P0C7V8 631 aa15.85■□□□□ 0.13
C19orf53-204ENST00000588858 UNC13AQ9UPW8 1703 aa15.53■□□□□ 0.08
C19orf53-204ENST00000588858 SCRIBQ14160 1630 aa15.5■□□□□ 0.07
C19orf53-204ENST00000588858 SHROOM4Q9ULL8 1493 aa15.49■□□□□ 0.07
C19orf53-204ENST00000588858 BICRAQ9NZM4 1560 aa15.48■□□□□ 0.07
C19orf53-204ENST00000588858 PABPN1Q86U42 306 aaKnown RBP eCLIP15.32■□□□□ 0.04
C19orf53-204ENST00000588858 EIF4G1Q04637 1599 aaKnown RBP15.04■□□□□ -0
C19orf53-204ENST00000588858 BAZ1AQ9NRL2 1556 aaPredicted RBP14.99□□□□□ -0.01
C19orf53-204ENST00000588858 CECR2Q9BXF3 1484 aa14.98□□□□□ -0.01
C19orf53-204ENST00000588858 SMARCA4P51532 1647 aa14.93□□□□□ -0.02
C19orf53-204ENST00000588858 PEG3Q9GZU2 1588 aa14.89□□□□□ -0.03
C19orf53-204ENST00000588858 CC2D2AQ9P2K1 1620 aa14.88□□□□□ -0.03
C19orf53-204ENST00000588858 MROH2BQ7Z745 1585 aa14.87□□□□□ -0.03
C19orf53-204ENST00000588858 DNAJC5BQ9UF47 199 aa14.85□□□□□ -0.03
C19orf53-204ENST00000588858 SMARCA2P51531 1590 aa14.83□□□□□ -0.04
C19orf53-204ENST00000588858 RSF1Q96T23 1441 aaPredicted RBP14.83□□□□□ -0.04
C19orf53-204ENST00000588858 NCAPD3P42695 1498 aa14.82□□□□□ -0.04
C19orf53-204ENST00000588858 ATAD2BQ9ULI0 1458 aa14.82□□□□□ -0.04
C19orf53-204ENST00000588858 HMGXB3Q12766 1538 aa14.77□□□□□ -0.04
C19orf53-204ENST00000588858 BAZ1BQ9UIG0 1483 aaKnown RBP14.68□□□□□ -0.06
C19orf53-204ENST00000588858 WIZO95785 1651 aa14.67□□□□□ -0.06
C19orf53-204ENST00000588858 TOP2AP11388 1531 aaKnown RBP14.62□□□□□ -0.07
C19orf53-204ENST00000588858 SUPT5HO00267 1087 aaKnown RBP14.45□□□□□ -0.1
C19orf53-204ENST00000588858 CCDC88BA6NC98 1476 aa14.41□□□□□ -0.1
C19orf53-204ENST00000588858 CADPSQ9ULU8 1353 aa14.37□□□□□ -0.11
C19orf53-204ENST00000588858 LAMC3Q9Y6N6 1575 aa14.37□□□□□ -0.11
C19orf53-204ENST00000588858 CFTRP13569 1480 aa14.36□□□□□ -0.11
C19orf53-204ENST00000588858 NESP48681 1621 aa14.26□□□□□ -0.13
C19orf53-204ENST00000588858 PDS5BQ9NTI5 1447 aa14.25□□□□□ -0.13
C19orf53-204ENST00000588858 PRDM2Q13029 1718 aa14.2□□□□□ -0.14
C19orf53-204ENST00000588858 FANCD2Q9BXW9 1451 aa14.17□□□□□ -0.14
C19orf53-204ENST00000588858 ERCC6Q03468 1493 aa14.12□□□□□ -0.15
C19orf53-204ENST00000588858 CEP164Q9UPV0 1460 aa14.12□□□□□ -0.15
C19orf53-204ENST00000588858 KIF21AQ7Z4S6 1674 aa14.1□□□□□ -0.15
C19orf53-204ENST00000588858 MRC2Q9UBG0 1479 aa14.07□□□□□ -0.16
C19orf53-204ENST00000588858 THOC2Q8NI27 1593 aaKnown RBP14.06□□□□□ -0.16
C19orf53-204ENST00000588858 ABCC8Q09428 1581 aa14.05□□□□□ -0.16
C19orf53-204ENST00000588858 WDR62O43379 1518 aa14.04□□□□□ -0.16
C19orf53-204ENST00000588858 URB2Q14146 1524 aaKnown RBP14.01□□□□□ -0.17
C19orf53-204ENST00000588858 CUX2O14529 1486 aa14□□□□□ -0.17
C19orf53-204ENST00000588858 DNMBPQ6XZF7 1577 aa13.99□□□□□ -0.17
C19orf53-204ENST00000588858 TOPBP1Q92547 1522 aa13.97□□□□□ -0.17
C19orf53-204ENST00000588858 WRNQ14191 1432 aaPredicted RBP eCLIP13.95□□□□□ -0.18
C19orf53-204ENST00000588858 CUX1P39880 1505 aa13.94□□□□□ -0.18
C19orf53-204ENST00000588858 TOP2BQ02880 1626 aa13.92□□□□□ -0.18
C19orf53-204ENST00000588858 BIVM-ERCC5R4GMW8 1640 aa13.9□□□□□ -0.18
C19orf53-204ENST00000588858 POLA1P09884 1462 aaPredicted RBP13.87□□□□□ -0.19
C19orf53-204ENST00000588858 SYNJ1O43426 1573 aa13.87□□□□□ -0.19
C19orf53-204ENST00000588858 IFT140Q96RY7 1462 aa13.86□□□□□ -0.19
C19orf53-204ENST00000588858 FGD5Q6ZNL6 1462 aa13.85□□□□□ -0.19
C19orf53-204ENST00000588858 WDR97A6NE52 1622 aa13.81□□□□□ -0.2
C19orf53-204ENST00000588858 TARBP1Q13395 1621 aaKnown RBP13.81□□□□□ -0.2
C19orf53-204ENST00000588858 SOGA1O94964 1423 aa13.8□□□□□ -0.2
C19orf53-204ENST00000588858 ABCA10Q8WWZ4 1543 aa13.79□□□□□ -0.2
C19orf53-204ENST00000588858 RAD54L2Q9Y4B4 1467 aa13.74□□□□□ -0.21
C19orf53-204ENST00000588858 CHIC1Q5VXU3 224 aa13.73□□□□□ -0.21
C19orf53-204ENST00000588858 TRIM41Q8WV44 630 aa13.71□□□□□ -0.21
C19orf53-204ENST00000588858 ZNF608Q9ULD9 1512 aaPredicted RBP13.7□□□□□ -0.22
C19orf53-204ENST00000588858 ABCA5Q8WWZ7 1642 aa13.68□□□□□ -0.22
C19orf53-204ENST00000588858 EIF4G3O43432 1585 aaKnown RBP13.67□□□□□ -0.22
C19orf53-204ENST00000588858 TDRD9Q8NDG6 1382 aaKnown RBP13.66□□□□□ -0.22
C19orf53-204ENST00000588858 KIF27Q86VH2 1401 aa13.65□□□□□ -0.22
C19orf53-204ENST00000588858 AQRO60306 1485 aaKnown RBP eCLIP13.65□□□□□ -0.223e-6■□□□□ 10.6
C19orf53-204ENST00000588858 GRIN2BQ13224 1484 aa13.65□□□□□ -0.22
C19orf53-204ENST00000588858 GAPVD1Q14C86 1478 aa13.65□□□□□ -0.22
C19orf53-204ENST00000588858 ERICH3Q5RHP9 1530 aa13.64□□□□□ -0.23
C19orf53-204ENST00000588858 EEA1Q15075 1411 aa13.61□□□□□ -0.23
C19orf53-204ENST00000588858 MAGI1Q96QZ7 1491 aaPredicted RBP13.61□□□□□ -0.23
C19orf53-204ENST00000588858 IGF1RP08069 1367 aa13.58□□□□□ -0.24
C19orf53-204ENST00000588858 PBRM1Q86U86 1689 aa13.56□□□□□ -0.24
C19orf53-204ENST00000588858 FHAD1B1AJZ9 1412 aa13.55□□□□□ -0.24
C19orf53-204ENST00000588858 SNAPC4Q5SXM2 1469 aa13.55□□□□□ -0.24
C19orf53-204ENST00000588858 SYNJ2O15056 1496 aa13.54□□□□□ -0.24
C19orf53-204ENST00000588858 CUL7Q14999 1698 aa13.53□□□□□ -0.24
C19orf53-204ENST00000588858 RUSC2Q8N2Y8 1516 aa13.52□□□□□ -0.25
C19orf53-204ENST00000588858 ADAMTS12P58397 1594 aa13.52□□□□□ -0.25
C19orf53-204ENST00000588858 PRXQ9BXM0 1461 aa13.49□□□□□ -0.25
C19orf53-204ENST00000588858 CARMIL1Q5VZK9 1371 aa13.47□□□□□ -0.25
C19orf53-204ENST00000588858 CSRNP3Q8WYN3 585 aa13.47□□□□□ -0.25
C19orf53-204ENST00000588858 GRIN2AQ12879 1464 aa13.46□□□□□ -0.25
C19orf53-204ENST00000588858 CHMP7Q8WUX9 453 aaPredicted RBP13.44□□□□□ -0.26
C19orf53-204ENST00000588858 RAPGEF2Q9Y4G8 1499 aa13.43□□□□□ -0.26
C19orf53-204ENST00000588858 NUP160Q12769 1436 aa13.43□□□□□ -0.26
C19orf53-204ENST00000588858 CHD1O14646 1710 aa13.41□□□□□ -0.26
C19orf53-204ENST00000588858 OSCARQ8IYS5 282 aa13.4□□□□□ -0.26
C19orf53-204ENST00000588858 KIF21BO75037 1637 aa13.39□□□□□ -0.27
C19orf53-204ENST00000588858 CLASP1Q7Z460 1538 aa13.37□□□□□ -0.27
C19orf53-204ENST00000588858 FBLN2P98095 1184 aa13.36□□□□□ -0.27
C19orf53-204ENST00000588858 KIAA0586Q9BVV6 1533 aa13.35□□□□□ -0.27
C19orf53-204ENST00000588858 CEP170Q5SW79 1584 aa13.35□□□□□ -0.27
C19orf53-204ENST00000588858 GOLGA3Q08378 1498 aa13.32□□□□□ -0.28
C19orf53-204ENST00000588858 FAM9AQ8IZU1 332 aaPredicted RBP13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms