RNA–Protein interactions for RNA: ENST00000221576.4

C19orf53-201, Transcript of chromosome 19 open reading frame 53, humanhuman

TSL 2

Gene C19orf53, Length 504 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C19orf53-201ENST00000221576 NISCHQ9Y2I1 1504 aa15.22■□□□□ 0.03
C19orf53-201ENST00000221576 ABCC9O60706 1549 aa13.91□□□□□ -0.18
C19orf53-201ENST00000221576 CCDC180Q9P1Z9 1646 aa13.7□□□□□ -0.22
C19orf53-201ENST00000221576 RB1CC1Q8TDY2 1594 aa13.16□□□□□ -0.3
C19orf53-201ENST00000221576 DCAF8L2P0C7V8 631 aa13.11□□□□□ -0.31
C19orf53-201ENST00000221576 DNAJC5BQ9UF47 199 aa13.09□□□□□ -0.31
C19orf53-201ENST00000221576 NACADO15069 1562 aa13.03□□□□□ -0.32
C19orf53-201ENST00000221576 PABPN1Q86U42 306 aaKnown RBP eCLIP12.95□□□□□ -0.34
C19orf53-201ENST00000221576 UNC13AQ9UPW8 1703 aa12.76□□□□□ -0.37
C19orf53-201ENST00000221576 MYO15BQ96JP2 1530 aa12.74□□□□□ -0.37
C19orf53-201ENST00000221576 BICRAQ9NZM4 1560 aa12.69□□□□□ -0.38
C19orf53-201ENST00000221576 ZCCHC6Q5VYS8 1495 aaKnown RBP12.57□□□□□ -0.4
C19orf53-201ENST00000221576 SHROOM4Q9ULL8 1493 aa12.55□□□□□ -0.4
C19orf53-201ENST00000221576 CECR2Q9BXF3 1484 aa12.53□□□□□ -0.4
C19orf53-201ENST00000221576 DCAF1Q9Y4B6 1507 aa12.53□□□□□ -0.4
C19orf53-201ENST00000221576 SCRIBQ14160 1630 aa12.53□□□□□ -0.4
C19orf53-201ENST00000221576 CC2D2AQ9P2K1 1620 aa12.51□□□□□ -0.41
C19orf53-201ENST00000221576 EIF4G1Q04637 1599 aaKnown RBP12.44□□□□□ -0.42
C19orf53-201ENST00000221576 DNAJC5Q9H3Z4 198 aa12.17□□□□□ -0.46
C19orf53-201ENST00000221576 ERCC6Q03468 1493 aa12.08□□□□□ -0.48
C19orf53-201ENST00000221576 CUX2O14529 1486 aa12.02□□□□□ -0.49
C19orf53-201ENST00000221576 NCAPD3P42695 1498 aa12.01□□□□□ -0.49
C19orf53-201ENST00000221576 ATAD2BQ9ULI0 1458 aa11.95□□□□□ -0.5
C19orf53-201ENST00000221576 SMARCA2P51531 1590 aa11.95□□□□□ -0.5
C19orf53-201ENST00000221576 HMGXB3Q12766 1538 aa11.9□□□□□ -0.5
C19orf53-201ENST00000221576 SMARCA4P51532 1647 aa11.89□□□□□ -0.51
C19orf53-201ENST00000221576 BAZ1BQ9UIG0 1483 aaKnown RBP11.89□□□□□ -0.51
C19orf53-201ENST00000221576 NESP48681 1621 aa11.86□□□□□ -0.51
C19orf53-201ENST00000221576 BAZ1AQ9NRL2 1556 aaPredicted RBP11.86□□□□□ -0.51
C19orf53-201ENST00000221576 LAMC3Q9Y6N6 1575 aa11.77□□□□□ -0.53
C19orf53-201ENST00000221576 PDS5BQ9NTI5 1447 aa11.77□□□□□ -0.53
C19orf53-201ENST00000221576 PEG3Q9GZU2 1588 aa11.74□□□□□ -0.53
C19orf53-201ENST00000221576 THOC2Q8NI27 1593 aaKnown RBP11.73□□□□□ -0.53
C19orf53-201ENST00000221576 MROH2BQ7Z745 1585 aa11.72□□□□□ -0.53
C19orf53-201ENST00000221576 TRIM41Q8WV44 630 aa11.7□□□□□ -0.54
C19orf53-201ENST00000221576 KIF21AQ7Z4S6 1674 aa11.68□□□□□ -0.54
C19orf53-201ENST00000221576 CADPSQ9ULU8 1353 aa11.67□□□□□ -0.54
C19orf53-201ENST00000221576 MRC2Q9UBG0 1479 aa11.64□□□□□ -0.55
C19orf53-201ENST00000221576 CEP164Q9UPV0 1460 aa11.58□□□□□ -0.56
C19orf53-201ENST00000221576 WIZO95785 1651 aa11.58□□□□□ -0.56
C19orf53-201ENST00000221576 WDR62O43379 1518 aa11.57□□□□□ -0.56
C19orf53-201ENST00000221576 FANCD2Q9BXW9 1451 aa11.54□□□□□ -0.56
C19orf53-201ENST00000221576 OSCARQ8IYS5 282 aa11.52□□□□□ -0.57
C19orf53-201ENST00000221576 CFTRP13569 1480 aa11.48□□□□□ -0.57
C19orf53-201ENST00000221576 RSF1Q96T23 1441 aaPredicted RBP11.44□□□□□ -0.58
C19orf53-201ENST00000221576 TOP2AP11388 1531 aaKnown RBP11.44□□□□□ -0.58
C19orf53-201ENST00000221576 URB2Q14146 1524 aaKnown RBP11.4□□□□□ -0.58
C19orf53-201ENST00000221576 IFT140Q96RY7 1462 aa11.34□□□□□ -0.59
C19orf53-201ENST00000221576 PRDM2Q13029 1718 aa11.32□□□□□ -0.6
C19orf53-201ENST00000221576 CCDC88BA6NC98 1476 aa11.32□□□□□ -0.6
C19orf53-201ENST00000221576 ABCC8Q09428 1581 aa11.3□□□□□ -0.6
C19orf53-201ENST00000221576 FBLN2P98095 1184 aa11.3□□□□□ -0.6
C19orf53-201ENST00000221576 ZNF608Q9ULD9 1512 aaPredicted RBP11.3□□□□□ -0.6
C19orf53-201ENST00000221576 RIMBP3CA6NJZ7 1639 aa11.29□□□□□ -0.6
C19orf53-201ENST00000221576 RIMBP3BA6NNM3 1639 aa11.29□□□□□ -0.6
C19orf53-201ENST00000221576 RIMBP3Q9UFD9 1639 aa11.29□□□□□ -0.6
C19orf53-201ENST00000221576 TOPBP1Q92547 1522 aa11.29□□□□□ -0.6
C19orf53-201ENST00000221576 CYB5RLQ6IPT4 315 aa11.28□□□□□ -0.6
C19orf53-201ENST00000221576 ARHGEF11O15085 1522 aa11.26□□□□□ -0.61
C19orf53-201ENST00000221576 TRHP20396 242 aaPredicted RBP11.26□□□□□ -0.61
C19orf53-201ENST00000221576 EIF4G3O43432 1585 aaKnown RBP11.24□□□□□ -0.61
C19orf53-201ENST00000221576 DNMBPQ6XZF7 1577 aa11.24□□□□□ -0.61
C19orf53-201ENST00000221576 AQRO60306 1485 aaKnown RBP eCLIP11.22□□□□□ -0.613e-6■□□□□ 10.6
C19orf53-201ENST00000221576 CHD1O14646 1710 aa11.17□□□□□ -0.62
C19orf53-201ENST00000221576 CHMP7Q8WUX9 453 aaPredicted RBP11.16□□□□□ -0.62
C19orf53-201ENST00000221576 POLA1P09884 1462 aaPredicted RBP11.16□□□□□ -0.62
C19orf53-201ENST00000221576 SOGA1O94964 1423 aa11.16□□□□□ -0.62
C19orf53-201ENST00000221576 TARBP1Q13395 1621 aaKnown RBP11.15□□□□□ -0.62
C19orf53-201ENST00000221576 TDRD9Q8NDG6 1382 aaKnown RBP11.15□□□□□ -0.63
C19orf53-201ENST00000221576 RAD54L2Q9Y4B4 1467 aa11.13□□□□□ -0.63
C19orf53-201ENST00000221576 ARAP1Q96P48 1450 aa11.12□□□□□ -0.63
C19orf53-201ENST00000221576 SNAPC4Q5SXM2 1469 aa11.1□□□□□ -0.63
C19orf53-201ENST00000221576 FGD5Q6ZNL6 1462 aa11.09□□□□□ -0.63
C19orf53-201ENST00000221576 SYNJ1O43426 1573 aa11.07□□□□□ -0.64
C19orf53-201ENST00000221576 AEBP2Q6ZN18 517 aaPredicted RBP11.07□□□□□ -0.64
C19orf53-201ENST00000221576 GRIN2BQ13224 1484 aa11.06□□□□□ -0.64
C19orf53-201ENST00000221576 MAGI1Q96QZ7 1491 aaPredicted RBP11.06□□□□□ -0.64
C19orf53-201ENST00000221576 WDR97A6NE52 1622 aa11.06□□□□□ -0.64
C19orf53-201ENST00000221576 SYNJ2O15056 1496 aa11.03□□□□□ -0.64
C19orf53-201ENST00000221576 CUX1P39880 1505 aa11.02□□□□□ -0.65
C19orf53-201ENST00000221576 GAPVD1Q14C86 1478 aa11.01□□□□□ -0.65
C19orf53-201ENST00000221576 CLASP1Q7Z460 1538 aa11.01□□□□□ -0.65
C19orf53-201ENST00000221576 SUPT5HO00267 1087 aaKnown RBP10.99□□□□□ -0.65
C19orf53-201ENST00000221576 PBRM1Q86U86 1689 aa10.96□□□□□ -0.65
C19orf53-201ENST00000221576 ABCA10Q8WWZ4 1543 aa10.94□□□□□ -0.66
C19orf53-201ENST00000221576 WRNQ14191 1432 aaPredicted RBP eCLIP10.92□□□□□ -0.66
C19orf53-201ENST00000221576 GRIN2AQ12879 1464 aa10.9□□□□□ -0.66
C19orf53-201ENST00000221576 ABCA5Q8WWZ7 1642 aa10.9□□□□□ -0.66
C19orf53-201ENST00000221576 FHAD1B1AJZ9 1412 aa10.86□□□□□ -0.67
C19orf53-201ENST00000221576 NPM1P06748 294 aaKnown RBP eCLIP10.85□□□□□ -0.67
C19orf53-201ENST00000221576 ADAMTS12P58397 1594 aa10.85□□□□□ -0.67
C19orf53-201ENST00000221576 CEP170Q5SW79 1584 aa10.85□□□□□ -0.67
C19orf53-201ENST00000221576 NUP160Q12769 1436 aa10.84□□□□□ -0.67
C19orf53-201ENST00000221576 ERCC6L2Q5T890 1561 aa10.83□□□□□ -0.68
C19orf53-201ENST00000221576 TOP2BQ02880 1626 aa10.81□□□□□ -0.68
C19orf53-201ENST00000221576 JPH4Q96JJ6 628 aa10.81□□□□□ -0.68
C19orf53-201ENST00000221576 PRG4Q92954 1404 aaPredicted RBP10.81□□□□□ -0.68
C19orf53-201ENST00000221576 ERICH3Q5RHP9 1530 aa10.8□□□□□ -0.68
C19orf53-201ENST00000221576 BIVM-ERCC5R4GMW8 1640 aa10.8□□□□□ -0.68
C19orf53-201ENST00000221576 FAM69CQ0P6D2 419 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms