RNA–Protein interactions for RNA: ENST00000489188.1

SRSF11-216, Transcript of serine and arginine rich splicing factor 11, humanhuman

TSL 2

Gene SRSF11, Length 784 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF11-216ENST00000489188 AEBP2Q6ZN18 517 aaPredicted RBP17.64■□□□□ 0.41
SRSF11-216ENST00000489188 CHIC1Q5VXU3 224 aa17.38■□□□□ 0.37
SRSF11-216ENST00000489188 PHF23Q9BUL5 403 aaPredicted RBP15.24■□□□□ 0.03
SRSF11-216ENST00000489188 SENP3Q9H4L4 574 aaPredicted RBP15.05■□□□□ -0
SRSF11-216ENST00000489188 PLPPR3Q6T4P5 718 aa14.2□□□□□ -0.14
SRSF11-216ENST00000489188 FOXD1Q16676 465 aa13.88□□□□□ -0.19
SRSF11-216ENST00000489188 ADRA2BP18089 450 aa13.43□□□□□ -0.26
SRSF11-216ENST00000489188 PPP6R1Q9UPN7 881 aa13.41□□□□□ -0.26
SRSF11-216ENST00000489188 PIAS4Q8N2W9 510 aaPredicted RBP13.16□□□□□ -0.3
SRSF11-216ENST00000489188 MSH5O43196 834 aa12.84□□□□□ -0.35
SRSF11-216ENST00000489188 PPP4R3CPQ6ZMV5 832 aa12.5□□□□□ -0.41
SRSF11-216ENST00000489188 SCAF1Q9H7N4 1312 aaKnown RBP12.39□□□□□ -0.43
SRSF11-216ENST00000489188 KCNA4P22459 653 aa12.29□□□□□ -0.44
SRSF11-216ENST00000489188 NCBP3Q53F19 620 aaKnown RBP12.27□□□□□ -0.45
SRSF11-216ENST00000489188 CNKSR2Q8WXI2 1034 aa12.15□□□□□ -0.46
SRSF11-216ENST00000489188 MAPK8IP2Q13387 824 aaPredicted RBP12.14□□□□□ -0.47
SRSF11-216ENST00000489188 NPM3O75607 178 aaKnown RBP12□□□□□ -0.49
SRSF11-216ENST00000489188 DMRT2Q9Y5R5 561 aa12□□□□□ -0.49
SRSF11-216ENST00000489188 RNF216Q9NWF9 866 aaPredicted RBP11.88□□□□□ -0.51
SRSF11-216ENST00000489188 HOXD11P31277 338 aaPredicted RBP11.79□□□□□ -0.52
SRSF11-216ENST00000489188 SLC4A1APQ9BWU0 796 aaKnown RBP11.78□□□□□ -0.52
SRSF11-216ENST00000489188 DNAJC5BQ9UF47 199 aa11.66□□□□□ -0.54
SRSF11-216ENST00000489188 EHMT2Q96KQ7 1210 aa11.54□□□□□ -0.56
SRSF11-216ENST00000489188 DCAF8L1A6NGE4 600 aa11.51□□□□□ -0.57
SRSF11-216ENST00000489188 POTEDQ86YR6 584 aa11.45□□□□□ -0.58
SRSF11-216ENST00000489188 FOXD4L1Q9NU39 408 aa11.33□□□□□ -0.6
SRSF11-216ENST00000489188 CSRNP3Q8WYN3 585 aa11.32□□□□□ -0.6
SRSF11-216ENST00000489188 ZBTB22O15209 634 aa11.28□□□□□ -0.6
SRSF11-216ENST00000489188 SLC4A2P04920 1241 aa11.28□□□□□ -0.6
SRSF11-216ENST00000489188 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.28□□□□□ -0.66e-11■■■□□ 19.1
SRSF11-216ENST00000489188 MYCNP04198 464 aaPredicted RBP11.14□□□□□ -0.63
SRSF11-216ENST00000489188 U3KPZ7 1027 aaPredicted RBP11.05□□□□□ -0.64
SRSF11-216ENST00000489188 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.04□□□□□ -0.64
SRSF11-216ENST00000489188 HNRNPUL2Q1KMD3 747 aaKnown RBP11.04□□□□□ -0.64
SRSF11-216ENST00000489188 SAMD1Q6SPF0 538 aaPredicted RBP10.99□□□□□ -0.65
SRSF11-216ENST00000489188 RNF39Q9H2S5 420 aa10.97□□□□□ -0.65
SRSF11-216ENST00000489188 ATXN8OSP0DMR3 200 aa10.95□□□□□ -0.66
SRSF11-216ENST00000489188 APLP2Q06481 763 aa10.93□□□□□ -0.66
SRSF11-216ENST00000489188 C1QBPQ07021 282 aaKnown RBP10.88□□□□□ -0.67
SRSF11-216ENST00000489188 ATF5Q9Y2D1 282 aaPredicted RBP10.74□□□□□ -0.69
SRSF11-216ENST00000489188 CAPN15O75808 1086 aa10.71□□□□□ -0.69
SRSF11-216ENST00000489188 ZNF219Q9P2Y4 722 aaPredicted RBP10.71□□□□□ -0.69
SRSF11-216ENST00000489188 SPINK5Q9NQ38 1064 aaPredicted RBP10.7□□□□□ -0.7
SRSF11-216ENST00000489188 TRHP20396 242 aaPredicted RBP10.67□□□□□ -0.7
SRSF11-216ENST00000489188 CACNB1Q02641 598 aaPredicted RBP10.64□□□□□ -0.71
SRSF11-216ENST00000489188 POLA2Q14181 598 aa10.51□□□□□ -0.73
SRSF11-216ENST00000489188 ABCB7O75027 752 aa10.48□□□□□ -0.73
SRSF11-216ENST00000489188 DSG3P32926 999 aa10.46□□□□□ -0.73
SRSF11-216ENST00000489188 ZBTB12Q9Y330 459 aaPredicted RBP10.42□□□□□ -0.74
SRSF11-216ENST00000489188 FBLN2P98095 1184 aa10.41□□□□□ -0.74
SRSF11-216ENST00000489188 MKRN4PQ13434 485 aaPredicted RBP10.29□□□□□ -0.76
SRSF11-216ENST00000489188 FKBP8Q14318 412 aa10.27□□□□□ -0.77
SRSF11-216ENST00000489188 SPDYE4A6NLX3 237 aa10.18□□□□□ -0.78
SRSF11-216ENST00000489188 OSCARQ8IYS5 282 aa10.15□□□□□ -0.78
SRSF11-216ENST00000489188 SPDYE2BA6NHP3 402 aa10.11□□□□□ -0.79
SRSF11-216ENST00000489188 SPDYE6P0CI01 402 aa10.11□□□□□ -0.79
SRSF11-216ENST00000489188 SPDYE2Q495Y8 402 aa10.11□□□□□ -0.79
SRSF11-216ENST00000489188 ZNF692Q9BU19 519 aaPredicted RBP10.07□□□□□ -0.8
SRSF11-216ENST00000489188 RBM42Q9BTD8 480 aaKnown RBP10.05□□□□□ -0.8
SRSF11-216ENST00000489188 SSUH2Q9Y2M2 353 aa10□□□□□ -0.81
SRSF11-216ENST00000489188 PROM2Q8N271 834 aa9.99□□□□□ -0.81
SRSF11-216ENST00000489188 FBXO3Q9UK99 471 aa9.94□□□□□ -0.82
SRSF11-216ENST00000489188 PABPN1Q86U42 306 aaKnown RBP eCLIP9.93□□□□□ -0.824e-15■□□□□ 9.1
SRSF11-216ENST00000489188 AKT1S1Q96B36 256 aa9.92□□□□□ -0.82
SRSF11-216ENST00000489188 STAG3Q9UJ98 1225 aa9.84□□□□□ -0.83
SRSF11-216ENST00000489188 REM2Q8IYK8 340 aaPredicted RBP9.79□□□□□ -0.84
SRSF11-216ENST00000489188 SPDYE1Q8NFV5 336 aaPredicted RBP9.79□□□□□ -0.84
SRSF11-216ENST00000489188 VASPP50552 380 aaPredicted RBP9.75□□□□□ -0.85
SRSF11-216ENST00000489188 CLEC11AQ9Y240 323 aa9.72□□□□□ -0.85
SRSF11-216ENST00000489188 PITPNM1O00562 1244 aa9.67□□□□□ -0.86
SRSF11-216ENST00000489188 PLEKHG5O94827 1062 aa9.67□□□□□ -0.86
SRSF11-216ENST00000489188 PLCD3Q8N3E9 789 aa9.67□□□□□ -0.86
SRSF11-216ENST00000489188 PRR29P0C7W0 189 aa9.66□□□□□ -0.86
SRSF11-216ENST00000489188 MIER1Q8N108 512 aa9.65□□□□□ -0.86
SRSF11-216ENST00000489188 KLHL34Q8N239 644 aa9.59□□□□□ -0.87
SRSF11-216ENST00000489188 AMER1Q5JTC6 1135 aaPredicted RBP9.58□□□□□ -0.88
SRSF11-216ENST00000489188 IFNLR1Q8IU57 520 aaPredicted RBP9.58□□□□□ -0.88
SRSF11-216ENST00000489188 ZBTB47Q9UFB7 747 aaPredicted RBP9.58□□□□□ -0.88
SRSF11-216ENST00000489188 CHRDL2Q6WN34 429 aa9.54□□□□□ -0.88
SRSF11-216ENST00000489188 SPOCK2Q92563 424 aa9.52□□□□□ -0.89
SRSF11-216ENST00000489188 CREBZFQ9NS37 354 aa9.52□□□□□ -0.89
SRSF11-216ENST00000489188 RTN4Q9NQC3 1192 aaKnown RBP9.48□□□□□ -0.89
SRSF11-216ENST00000489188 FXR2P51116 673 aaKnown RBP eCLIP9.47□□□□□ -0.891e-6■■■■□ 21.3
SRSF11-216ENST00000489188 NPM1P06748 294 aaKnown RBP eCLIP9.44□□□□□ -0.9
SRSF11-216ENST00000489188 PRKAR2AP13861 404 aaKnown RBP9.44□□□□□ -0.9
SRSF11-216ENST00000489188 CHADLQ6NUI6 762 aa9.43□□□□□ -0.9
SRSF11-216ENST00000489188 PIP4P2Q8N4L2 257 aa9.43□□□□□ -0.9
SRSF11-216ENST00000489188 MNX1P50219 401 aaPredicted RBP9.4□□□□□ -0.9
SRSF11-216ENST00000489188 FARP1Q9Y4F1 1045 aaPredicted RBP9.39□□□□□ -0.91
SRSF11-216ENST00000489188 NUBP1P53384 320 aa9.35□□□□□ -0.91
SRSF11-216ENST00000489188 CIZ1Q9ULV3 898 aaPredicted RBP9.35□□□□□ -0.91
SRSF11-216ENST00000489188 GSE1Q14687 1217 aa9.34□□□□□ -0.91
SRSF11-216ENST00000489188 FAM212AQ96EL1 285 aa9.34□□□□□ -0.91
SRSF11-216ENST00000489188 NISCHQ9Y2I1 1504 aa9.33□□□□□ -0.92
SRSF11-216ENST00000489188 DCAF8Q5TAQ9 597 aa9.31□□□□□ -0.92
SRSF11-216ENST00000489188 PKD2Q13563 968 aa9.3□□□□□ -0.92
SRSF11-216ENST00000489188 TRIM41Q8WV44 630 aa9.3□□□□□ -0.92
SRSF11-216ENST00000489188 RASEFQ8IZ41 740 aa9.29□□□□□ -0.92
SRSF11-216ENST00000489188 PAK3O75914 559 aaPredicted RBP9.27□□□□□ -0.93
SRSF11-216ENST00000489188 ECM2O94769 699 aaPredicted RBP9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms