RNA–Protein interactions for RNA: ENST00000556790.1

LGMN-213, Transcript of legumain, humanhuman

TSL 2

Gene LGMN, Length 352 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LGMN-213ENST00000556790 NISCHQ9Y2I1 1504 aa15.77■□□□□ 0.11
LGMN-213ENST00000556790 ABCC9O60706 1549 aa14.09□□□□□ -0.15
LGMN-213ENST00000556790 CCDC180Q9P1Z9 1646 aa14.04□□□□□ -0.16
LGMN-213ENST00000556790 DCAF8L2P0C7V8 631 aa13.39□□□□□ -0.27
LGMN-213ENST00000556790 RB1CC1Q8TDY2 1594 aa13.32□□□□□ -0.28
LGMN-213ENST00000556790 NACADO15069 1562 aa13.23□□□□□ -0.29
LGMN-213ENST00000556790 UNC13AQ9UPW8 1703 aa13.17□□□□□ -0.3
LGMN-213ENST00000556790 PABPN1Q86U42 306 aaKnown RBP eCLIP13.17□□□□□ -0.3
LGMN-213ENST00000556790 DNAJC5BQ9UF47 199 aa13.16□□□□□ -0.3
LGMN-213ENST00000556790 ZCCHC6Q5VYS8 1495 aaKnown RBP13.09□□□□□ -0.31
LGMN-213ENST00000556790 BICRAQ9NZM4 1560 aa13.03□□□□□ -0.32
LGMN-213ENST00000556790 MYO15BQ96JP2 1530 aa13□□□□□ -0.33
LGMN-213ENST00000556790 SCRIBQ14160 1630 aa12.96□□□□□ -0.33
LGMN-213ENST00000556790 DCAF1Q9Y4B6 1507 aa12.92□□□□□ -0.34
LGMN-213ENST00000556790 AEBP2Q6ZN18 517 aaPredicted RBP12.77□□□□□ -0.37
LGMN-213ENST00000556790 CC2D2AQ9P2K1 1620 aa12.69□□□□□ -0.38
LGMN-213ENST00000556790 EIF4G1Q04637 1599 aaKnown RBP12.66□□□□□ -0.38
LGMN-213ENST00000556790 SHROOM4Q9ULL8 1493 aa12.62□□□□□ -0.39
LGMN-213ENST00000556790 CECR2Q9BXF3 1484 aa12.6□□□□□ -0.39
LGMN-213ENST00000556790 SMARCA4P51532 1647 aa12.3□□□□□ -0.44
LGMN-213ENST00000556790 ATAD2BQ9ULI0 1458 aa12.27□□□□□ -0.45
LGMN-213ENST00000556790 MROH2BQ7Z745 1585 aa12.23□□□□□ -0.45
LGMN-213ENST00000556790 NCAPD3P42695 1498 aa12.22□□□□□ -0.45
LGMN-213ENST00000556790 BAZ1AQ9NRL2 1556 aaPredicted RBP12.19□□□□□ -0.46
LGMN-213ENST00000556790 CHIC1Q5VXU3 224 aa12.18□□□□□ -0.46
LGMN-213ENST00000556790 NESP48681 1621 aa12.17□□□□□ -0.46
LGMN-213ENST00000556790 SMARCA2P51531 1590 aa12.17□□□□□ -0.46
LGMN-213ENST00000556790 BAZ1BQ9UIG0 1483 aaKnown RBP12.14□□□□□ -0.47
LGMN-213ENST00000556790 HMGXB3Q12766 1538 aa12.14□□□□□ -0.47
LGMN-213ENST00000556790 WIZO95785 1651 aa12.12□□□□□ -0.47
LGMN-213ENST00000556790 PEG3Q9GZU2 1588 aa12.1□□□□□ -0.47
LGMN-213ENST00000556790 ERCC6Q03468 1493 aa12.08□□□□□ -0.48
LGMN-213ENST00000556790 KIF21AQ7Z4S6 1674 aa12□□□□□ -0.49
LGMN-213ENST00000556790 RSF1Q96T23 1441 aaPredicted RBP11.97□□□□□ -0.49
LGMN-213ENST00000556790 THOC2Q8NI27 1593 aaKnown RBP11.95□□□□□ -0.5
LGMN-213ENST00000556790 LAMC3Q9Y6N6 1575 aa11.94□□□□□ -0.5
LGMN-213ENST00000556790 CUX2O14529 1486 aa11.93□□□□□ -0.5
LGMN-213ENST00000556790 CADPSQ9ULU8 1353 aa11.88□□□□□ -0.51
LGMN-213ENST00000556790 TOP2AP11388 1531 aaKnown RBP11.87□□□□□ -0.51
LGMN-213ENST00000556790 DNAJC5Q9H3Z4 198 aa11.85□□□□□ -0.51
LGMN-213ENST00000556790 PDS5BQ9NTI5 1447 aa11.85□□□□□ -0.51
LGMN-213ENST00000556790 FANCD2Q9BXW9 1451 aa11.79□□□□□ -0.52
LGMN-213ENST00000556790 MRC2Q9UBG0 1479 aa11.79□□□□□ -0.52
LGMN-213ENST00000556790 CCDC88BA6NC98 1476 aa11.78□□□□□ -0.52
LGMN-213ENST00000556790 CFTRP13569 1480 aa11.77□□□□□ -0.52
LGMN-213ENST00000556790 CEP164Q9UPV0 1460 aa11.77□□□□□ -0.52
LGMN-213ENST00000556790 WDR62O43379 1518 aa11.76□□□□□ -0.53
LGMN-213ENST00000556790 URB2Q14146 1524 aaKnown RBP11.72□□□□□ -0.53
LGMN-213ENST00000556790 PRDM2Q13029 1718 aa11.7□□□□□ -0.54
LGMN-213ENST00000556790 SUPT5HO00267 1087 aaKnown RBP11.64□□□□□ -0.55
LGMN-213ENST00000556790 ZNF608Q9ULD9 1512 aaPredicted RBP11.6□□□□□ -0.55
LGMN-213ENST00000556790 TOPBP1Q92547 1522 aa11.59□□□□□ -0.55
LGMN-213ENST00000556790 DNMBPQ6XZF7 1577 aa11.53□□□□□ -0.56
LGMN-213ENST00000556790 TRIM41Q8WV44 630 aa11.51□□□□□ -0.57
LGMN-213ENST00000556790 RAD54L2Q9Y4B4 1467 aa11.51□□□□□ -0.57
LGMN-213ENST00000556790 EIF4G3O43432 1585 aaKnown RBP11.5□□□□□ -0.57
LGMN-213ENST00000556790 AQRO60306 1485 aaKnown RBP eCLIP11.5□□□□□ -0.57
LGMN-213ENST00000556790 IFT140Q96RY7 1462 aa11.5□□□□□ -0.57
LGMN-213ENST00000556790 TARBP1Q13395 1621 aaKnown RBP11.49□□□□□ -0.57
LGMN-213ENST00000556790 POLA1P09884 1462 aaPredicted RBP11.48□□□□□ -0.57
LGMN-213ENST00000556790 CUX1P39880 1505 aa11.47□□□□□ -0.57
LGMN-213ENST00000556790 FGD5Q6ZNL6 1462 aa11.44□□□□□ -0.58
LGMN-213ENST00000556790 OSCARQ8IYS5 282 aa11.44□□□□□ -0.58
LGMN-213ENST00000556790 TDRD9Q8NDG6 1382 aaKnown RBP11.43□□□□□ -0.58
LGMN-213ENST00000556790 ABCC8Q09428 1581 aa11.43□□□□□ -0.58
LGMN-213ENST00000556790 CHD1O14646 1710 aa11.43□□□□□ -0.58
LGMN-213ENST00000556790 SOGA1O94964 1423 aa11.42□□□□□ -0.58
LGMN-213ENST00000556790 FBLN2P98095 1184 aa11.4□□□□□ -0.58
LGMN-213ENST00000556790 RIMBP3CA6NJZ7 1639 aa11.38□□□□□ -0.59
LGMN-213ENST00000556790 RIMBP3BA6NNM3 1639 aa11.38□□□□□ -0.59
LGMN-213ENST00000556790 RIMBP3Q9UFD9 1639 aa11.38□□□□□ -0.59
LGMN-213ENST00000556790 WDR97A6NE52 1622 aa11.36□□□□□ -0.59
LGMN-213ENST00000556790 SNAPC4Q5SXM2 1469 aa11.36□□□□□ -0.59
LGMN-213ENST00000556790 SYNJ1O43426 1573 aa11.33□□□□□ -0.6
LGMN-213ENST00000556790 ARHGEF11O15085 1522 aa11.32□□□□□ -0.6
LGMN-213ENST00000556790 PBRM1Q86U86 1689 aa11.32□□□□□ -0.6
LGMN-213ENST00000556790 ABCA5Q8WWZ7 1642 aa11.27□□□□□ -0.6
LGMN-213ENST00000556790 BIVM-ERCC5R4GMW8 1640 aa11.27□□□□□ -0.6
LGMN-213ENST00000556790 GAPVD1Q14C86 1478 aa11.27□□□□□ -0.6
LGMN-213ENST00000556790 TOP2BQ02880 1626 aa11.27□□□□□ -0.61
LGMN-213ENST00000556790 WRNQ14191 1432 aaPredicted RBP eCLIP11.26□□□□□ -0.61
LGMN-213ENST00000556790 GRIN2BQ13224 1484 aa11.26□□□□□ -0.61
LGMN-213ENST00000556790 CYB5RLQ6IPT4 315 aa11.26□□□□□ -0.61
LGMN-213ENST00000556790 ABCA10Q8WWZ4 1543 aa11.25□□□□□ -0.61
LGMN-213ENST00000556790 CHMP7Q8WUX9 453 aaPredicted RBP11.25□□□□□ -0.61
LGMN-213ENST00000556790 ARAP1Q96P48 1450 aa11.24□□□□□ -0.61
LGMN-213ENST00000556790 MAGI1Q96QZ7 1491 aaPredicted RBP11.23□□□□□ -0.61
LGMN-213ENST00000556790 CLASP1Q7Z460 1538 aa11.23□□□□□ -0.61
LGMN-213ENST00000556790 SYNJ2O15056 1496 aa11.22□□□□□ -0.61
LGMN-213ENST00000556790 ADAMTS12P58397 1594 aa11.19□□□□□ -0.62
LGMN-213ENST00000556790 ERCC6L2Q5T890 1561 aa11.19□□□□□ -0.62
LGMN-213ENST00000556790 CEP170Q5SW79 1584 aa11.17□□□□□ -0.62
LGMN-213ENST00000556790 GRIN2AQ12879 1464 aa11.15□□□□□ -0.62
LGMN-213ENST00000556790 TRHP20396 242 aaPredicted RBP11.1□□□□□ -0.63
LGMN-213ENST00000556790 FHAD1B1AJZ9 1412 aa11.09□□□□□ -0.63
LGMN-213ENST00000556790 ERICH3Q5RHP9 1530 aa11.09□□□□□ -0.63
LGMN-213ENST00000556790 NUP160Q12769 1436 aa11.09□□□□□ -0.63
LGMN-213ENST00000556790 RUSC2Q8N2Y8 1516 aa11.04□□□□□ -0.64
LGMN-213ENST00000556790 SHROOM2Q13796 1616 aa11.04□□□□□ -0.64
LGMN-213ENST00000556790 IGF1RP08069 1367 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms