RNA–Protein interactions for RNA: ENST00000588234.5

C19orf53-202, Transcript of chromosome 19 open reading frame 53, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C19orf53, Length 873 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C19orf53-202ENST00000588234 NISCHQ9Y2I1 1504 aa31.54■■■□□ 2.64
C19orf53-202ENST00000588234 CCDC180Q9P1Z9 1646 aa27.8■■■□□ 2.04
C19orf53-202ENST00000588234 ZCCHC6Q5VYS8 1495 aaKnown RBP26.42■■□□□ 1.82
C19orf53-202ENST00000588234 ABCC9O60706 1549 aa26.35■■□□□ 1.81
C19orf53-202ENST00000588234 DCAF1Q9Y4B6 1507 aa26.31■■□□□ 1.8
C19orf53-202ENST00000588234 MYO15BQ96JP2 1530 aa26.25■■□□□ 1.79
C19orf53-202ENST00000588234 NACADO15069 1562 aa26.03■■□□□ 1.76
C19orf53-202ENST00000588234 RB1CC1Q8TDY2 1594 aa25.83■■□□□ 1.73
C19orf53-202ENST00000588234 DCAF8L2P0C7V8 631 aa25.83■■□□□ 1.73
C19orf53-202ENST00000588234 SCRIBQ14160 1630 aa25.17■■□□□ 1.62
C19orf53-202ENST00000588234 UNC13AQ9UPW8 1703 aa25.06■■□□□ 1.6
C19orf53-202ENST00000588234 SHROOM4Q9ULL8 1493 aa25.05■■□□□ 1.6
C19orf53-202ENST00000588234 BICRAQ9NZM4 1560 aa24.95■■□□□ 1.58
C19orf53-202ENST00000588234 PABPN1Q86U42 306 aaKnown RBP eCLIP24.7■■□□□ 1.54
C19orf53-202ENST00000588234 BAZ1AQ9NRL2 1556 aaPredicted RBP24.43■■□□□ 1.5
C19orf53-202ENST00000588234 CECR2Q9BXF3 1484 aa24.36■■□□□ 1.49
C19orf53-202ENST00000588234 SMARCA4P51532 1647 aa24.28■■□□□ 1.48
C19orf53-202ENST00000588234 EIF4G1Q04637 1599 aaKnown RBP24.25■■□□□ 1.47
C19orf53-202ENST00000588234 RSF1Q96T23 1441 aaPredicted RBP24.25■■□□□ 1.47
C19orf53-202ENST00000588234 MROH2BQ7Z745 1585 aa24.21■■□□□ 1.47
C19orf53-202ENST00000588234 PEG3Q9GZU2 1588 aa24.2■■□□□ 1.46
C19orf53-202ENST00000588234 SMARCA2P51531 1590 aa24.1■■□□□ 1.45
C19orf53-202ENST00000588234 ATAD2BQ9ULI0 1458 aa24.04■■□□□ 1.44
C19orf53-202ENST00000588234 NCAPD3P42695 1498 aa24.03■■□□□ 1.44
C19orf53-202ENST00000588234 CC2D2AQ9P2K1 1620 aa23.94■■□□□ 1.42
C19orf53-202ENST00000588234 HMGXB3Q12766 1538 aa23.94■■□□□ 1.42
C19orf53-202ENST00000588234 WIZO95785 1651 aa23.91■■□□□ 1.42
C19orf53-202ENST00000588234 SUPT5HO00267 1087 aaKnown RBP23.9■■□□□ 1.42
C19orf53-202ENST00000588234 TOP2AP11388 1531 aaKnown RBP23.85■■□□□ 1.41
C19orf53-202ENST00000588234 BAZ1BQ9UIG0 1483 aaKnown RBP23.84■■□□□ 1.41
C19orf53-202ENST00000588234 DNAJC5BQ9UF47 199 aa23.62■■□□□ 1.37
C19orf53-202ENST00000588234 CCDC88BA6NC98 1476 aa23.53■■□□□ 1.36
C19orf53-202ENST00000588234 CFTRP13569 1480 aa23.32■■□□□ 1.32
C19orf53-202ENST00000588234 CADPSQ9ULU8 1353 aa23.31■■□□□ 1.32
C19orf53-202ENST00000588234 LAMC3Q9Y6N6 1575 aa23.24■■□□□ 1.31
C19orf53-202ENST00000588234 PDS5BQ9NTI5 1447 aa23.08■■□□□ 1.29
C19orf53-202ENST00000588234 PRDM2Q13029 1718 aa23.08■■□□□ 1.29
C19orf53-202ENST00000588234 NESP48681 1621 aa22.97■■□□□ 1.27
C19orf53-202ENST00000588234 FANCD2Q9BXW9 1451 aa22.96■■□□□ 1.27
C19orf53-202ENST00000588234 ABCC8Q09428 1581 aa22.89■■□□□ 1.26
C19orf53-202ENST00000588234 CEP164Q9UPV0 1460 aa22.88■■□□□ 1.25
C19orf53-202ENST00000588234 WRNQ14191 1432 aaPredicted RBP eCLIP22.84■■□□□ 1.25
C19orf53-202ENST00000588234 CHIC1Q5VXU3 224 aa22.83■■□□□ 1.25
C19orf53-202ENST00000588234 ERCC6Q03468 1493 aa22.73■■□□□ 1.23
C19orf53-202ENST00000588234 MRC2Q9UBG0 1479 aa22.73■■□□□ 1.23
C19orf53-202ENST00000588234 TOP2BQ02880 1626 aa22.73■■□□□ 1.23
C19orf53-202ENST00000588234 KIF21AQ7Z4S6 1674 aa22.73■■□□□ 1.23
C19orf53-202ENST00000588234 DNMBPQ6XZF7 1577 aa22.72■■□□□ 1.23
C19orf53-202ENST00000588234 BIVM-ERCC5R4GMW8 1640 aa22.71■■□□□ 1.23
C19orf53-202ENST00000588234 TRIM41Q8WV44 630 aa22.7■■□□□ 1.22
C19orf53-202ENST00000588234 CUX1P39880 1505 aa22.68■■□□□ 1.22
C19orf53-202ENST00000588234 TOPBP1Q92547 1522 aa22.67■■□□□ 1.22
C19orf53-202ENST00000588234 URB2Q14146 1524 aaKnown RBP22.66■■□□□ 1.22
C19orf53-202ENST00000588234 WDR62O43379 1518 aa22.65■■□□□ 1.22
C19orf53-202ENST00000588234 SYNJ1O43426 1573 aa22.63■■□□□ 1.21
C19orf53-202ENST00000588234 THOC2Q8NI27 1593 aaKnown RBP22.59■■□□□ 1.21
C19orf53-202ENST00000588234 POLA1P09884 1462 aaPredicted RBP22.52■■□□□ 1.2
C19orf53-202ENST00000588234 FGD5Q6ZNL6 1462 aa22.52■■□□□ 1.2
C19orf53-202ENST00000588234 EEA1Q15075 1411 aa22.48■■□□□ 1.19
C19orf53-202ENST00000588234 SOGA1O94964 1423 aa22.45■■□□□ 1.18
C19orf53-202ENST00000588234 ABCA10Q8WWZ4 1543 aa22.44■■□□□ 1.18
C19orf53-202ENST00000588234 IFT140Q96RY7 1462 aa22.44■■□□□ 1.18
C19orf53-202ENST00000588234 CUX2O14529 1486 aa22.43■■□□□ 1.18
C19orf53-202ENST00000588234 WDR97A6NE52 1622 aa22.42■■□□□ 1.18
C19orf53-202ENST00000588234 KIF27Q86VH2 1401 aa22.37■■□□□ 1.17
C19orf53-202ENST00000588234 TARBP1Q13395 1621 aaKnown RBP22.36■■□□□ 1.17
C19orf53-202ENST00000588234 RAD54L2Q9Y4B4 1467 aa22.31■■□□□ 1.16
C19orf53-202ENST00000588234 ABCA5Q8WWZ7 1642 aa22.22■■□□□ 1.15
C19orf53-202ENST00000588234 CSRNP3Q8WYN3 585 aa22.22■■□□□ 1.15
C19orf53-202ENST00000588234 GAPVD1Q14C86 1478 aa22.21■■□□□ 1.15
C19orf53-202ENST00000588234 ERICH3Q5RHP9 1530 aa22.21■■□□□ 1.15
C19orf53-202ENST00000588234 IGF1RP08069 1367 aa22.18■■□□□ 1.14
C19orf53-202ENST00000588234 TDRD9Q8NDG6 1382 aaKnown RBP22.16■■□□□ 1.14
C19orf53-202ENST00000588234 GRIN2BQ13224 1484 aa22.15■■□□□ 1.14
C19orf53-202ENST00000588234 RUSC2Q8N2Y8 1516 aa22.14■■□□□ 1.13
C19orf53-202ENST00000588234 ZNF608Q9ULD9 1512 aaPredicted RBP22.11■■□□□ 1.13
C19orf53-202ENST00000588234 PRXQ9BXM0 1461 aa22.11■■□□□ 1.13
C19orf53-202ENST00000588234 AQRO60306 1485 aaKnown RBP eCLIP22.09■■□□□ 1.133e-6■□□□□ 10.6
C19orf53-202ENST00000588234 EIF4G3O43432 1585 aaKnown RBP22.08■■□□□ 1.13
C19orf53-202ENST00000588234 CUL7Q14999 1698 aa22.07■■□□□ 1.12
C19orf53-202ENST00000588234 MAGI1Q96QZ7 1491 aaPredicted RBP22.07■■□□□ 1.12
C19orf53-202ENST00000588234 CARMIL1Q5VZK9 1371 aa22.05■■□□□ 1.12
C19orf53-202ENST00000588234 KIF21BO75037 1637 aa22.05■■□□□ 1.12
C19orf53-202ENST00000588234 FHAD1B1AJZ9 1412 aa22.03■■□□□ 1.12
C19orf53-202ENST00000588234 RAPGEF2Q9Y4G8 1499 aa22■■□□□ 1.11
C19orf53-202ENST00000588234 PBRM1Q86U86 1689 aa22■■□□□ 1.11
C19orf53-202ENST00000588234 FAM9AQ8IZU1 332 aaPredicted RBP21.98■■□□□ 1.11
C19orf53-202ENST00000588234 GOLGA3Q08378 1498 aa21.96■■□□□ 1.11
C19orf53-202ENST00000588234 SYNJ2O15056 1496 aa21.93■■□□□ 1.1
C19orf53-202ENST00000588234 ADAMTS12P58397 1594 aa21.93■■□□□ 1.1
C19orf53-202ENST00000588234 SNAPC4Q5SXM2 1469 aa21.92■■□□□ 1.1
C19orf53-202ENST00000588234 TNIKQ9UKE5 1360 aa21.87■■□□□ 1.09
C19orf53-202ENST00000588234 GRIN2AQ12879 1464 aa21.83■■□□□ 1.09
C19orf53-202ENST00000588234 CHMP7Q8WUX9 453 aaPredicted RBP21.82■■□□□ 1.08
C19orf53-202ENST00000588234 NUP160Q12769 1436 aa21.77■■□□□ 1.08
C19orf53-202ENST00000588234 UBTFP17480 764 aaKnown RBP21.75■■□□□ 1.07
C19orf53-202ENST00000588234 LOC105371045A0A1W2PR82 267 aa21.74■■□□□ 1.07
C19orf53-202ENST00000588234 KIAA0586Q9BVV6 1533 aa21.73■■□□□ 1.07
C19orf53-202ENST00000588234 CTTNBP2Q8WZ74 1663 aa21.64■■□□□ 1.05
C19orf53-202ENST00000588234 FBLN2P98095 1184 aa21.63■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms