RNA–Protein interactions for RNA: ENST00000556221.1

PSMA6-213, Transcript of proteasome subunit alpha 6, humanhuman

TSL 3

Gene PSMA6, Length 423 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA6-213ENST00000556221 AEBP2Q6ZN18 517 aaPredicted RBP19.38■□□□□ 0.69
PSMA6-213ENST00000556221 CHIC1Q5VXU3 224 aa18.76■□□□□ 0.59
PSMA6-213ENST00000556221 SENP3Q9H4L4 574 aaPredicted RBP16.63■□□□□ 0.25
PSMA6-213ENST00000556221 PHF23Q9BUL5 403 aaPredicted RBP16.4■□□□□ 0.22
PSMA6-213ENST00000556221 FOXD1Q16676 465 aa15.38■□□□□ 0.05
PSMA6-213ENST00000556221 PLPPR3Q6T4P5 718 aa15.18■□□□□ 0.02
PSMA6-213ENST00000556221 ADRA2BP18089 450 aa14.55□□□□□ -0.08
PSMA6-213ENST00000556221 PPP6R1Q9UPN7 881 aa14.55□□□□□ -0.08
PSMA6-213ENST00000556221 PIAS4Q8N2W9 510 aaPredicted RBP14.5□□□□□ -0.09
PSMA6-213ENST00000556221 MSH5O43196 834 aa14.4□□□□□ -0.1
PSMA6-213ENST00000556221 SCAF1Q9H7N4 1312 aaKnown RBP13.48□□□□□ -0.25
PSMA6-213ENST00000556221 POTEDQ86YR6 584 aa13.48□□□□□ -0.25
PSMA6-213ENST00000556221 PPP4R3CPQ6ZMV5 832 aa13.3□□□□□ -0.28
PSMA6-213ENST00000556221 MAPK8IP2Q13387 824 aaPredicted RBP13.26□□□□□ -0.29
PSMA6-213ENST00000556221 DMRT2Q9Y5R5 561 aa13.2□□□□□ -0.3
PSMA6-213ENST00000556221 CNKSR2Q8WXI2 1034 aa13.02□□□□□ -0.33
PSMA6-213ENST00000556221 NCBP3Q53F19 620 aaKnown RBP12.97□□□□□ -0.33
PSMA6-213ENST00000556221 RNF216Q9NWF9 866 aaPredicted RBP12.82□□□□□ -0.36
PSMA6-213ENST00000556221 HOXD11P31277 338 aaPredicted RBP12.81□□□□□ -0.36
PSMA6-213ENST00000556221 DCAF8L1A6NGE4 600 aa12.68□□□□□ -0.38
PSMA6-213ENST00000556221 NPM3O75607 178 aaKnown RBP12.66□□□□□ -0.38
PSMA6-213ENST00000556221 KCNA4P22459 653 aa12.65□□□□□ -0.38
PSMA6-213ENST00000556221 DNAJC5BQ9UF47 199 aa12.39□□□□□ -0.43
PSMA6-213ENST00000556221 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.27□□□□□ -0.45
PSMA6-213ENST00000556221 RNF39Q9H2S5 420 aa12.24□□□□□ -0.45
PSMA6-213ENST00000556221 CACNB1Q02641 598 aaPredicted RBP12.16□□□□□ -0.46
PSMA6-213ENST00000556221 C1QBPQ07021 282 aaKnown RBP12.14□□□□□ -0.47
PSMA6-213ENST00000556221 SLC4A1APQ9BWU0 796 aaKnown RBP12.06□□□□□ -0.48
PSMA6-213ENST00000556221 SLC4A2P04920 1241 aa11.98□□□□□ -0.49
PSMA6-213ENST00000556221 U3KPZ7 1027 aaPredicted RBP11.96□□□□□ -0.49
PSMA6-213ENST00000556221 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.87□□□□□ -0.51
PSMA6-213ENST00000556221 HNRNPUL2Q1KMD3 747 aaKnown RBP11.87□□□□□ -0.51
PSMA6-213ENST00000556221 APLP2Q06481 763 aa11.84□□□□□ -0.51
PSMA6-213ENST00000556221 SAMD1Q6SPF0 538 aaPredicted RBP11.78□□□□□ -0.52
PSMA6-213ENST00000556221 FOXD4L1Q9NU39 408 aa11.78□□□□□ -0.52
PSMA6-213ENST00000556221 MYCNP04198 464 aaPredicted RBP11.77□□□□□ -0.53
PSMA6-213ENST00000556221 CAPN15O75808 1086 aa11.73□□□□□ -0.53
PSMA6-213ENST00000556221 SPINK5Q9NQ38 1064 aaPredicted RBP11.68□□□□□ -0.54
PSMA6-213ENST00000556221 ZNF219Q9P2Y4 722 aaPredicted RBP11.64□□□□□ -0.55
PSMA6-213ENST00000556221 TRHP20396 242 aaPredicted RBP11.6□□□□□ -0.55
PSMA6-213ENST00000556221 ZBTB22O15209 634 aa11.58□□□□□ -0.56
PSMA6-213ENST00000556221 DSG3P32926 999 aa11.55□□□□□ -0.56
PSMA6-213ENST00000556221 ABCB7O75027 752 aa11.43□□□□□ -0.58
PSMA6-213ENST00000556221 ATXN8OSP0DMR3 200 aa11.43□□□□□ -0.58
PSMA6-213ENST00000556221 EHMT2Q96KQ7 1210 aa11.38□□□□□ -0.59
PSMA6-213ENST00000556221 ATF5Q9Y2D1 282 aaPredicted RBP11.36□□□□□ -0.59
PSMA6-213ENST00000556221 POLA2Q14181 598 aa11.35□□□□□ -0.59
PSMA6-213ENST00000556221 CSRNP3Q8WYN3 585 aa11.35□□□□□ -0.59
PSMA6-213ENST00000556221 ZBTB12Q9Y330 459 aaPredicted RBP11.23□□□□□ -0.61
PSMA6-213ENST00000556221 RBM42Q9BTD8 480 aaKnown RBP11.12□□□□□ -0.63
PSMA6-213ENST00000556221 FBLN2P98095 1184 aa11.06□□□□□ -0.64
PSMA6-213ENST00000556221 OSCARQ8IYS5 282 aa10.94□□□□□ -0.66
PSMA6-213ENST00000556221 AKT1S1Q96B36 256 aa10.88□□□□□ -0.67
PSMA6-213ENST00000556221 MKRN4PQ13434 485 aaPredicted RBP10.86□□□□□ -0.67
PSMA6-213ENST00000556221 SPDYE2BA6NHP3 402 aa10.85□□□□□ -0.67
PSMA6-213ENST00000556221 SPDYE6P0CI01 402 aa10.85□□□□□ -0.67
PSMA6-213ENST00000556221 SPDYE2Q495Y8 402 aa10.85□□□□□ -0.67
PSMA6-213ENST00000556221 ZNF692Q9BU19 519 aaPredicted RBP10.77□□□□□ -0.69
PSMA6-213ENST00000556221 REM2Q8IYK8 340 aaPredicted RBP10.74□□□□□ -0.69
PSMA6-213ENST00000556221 CHRDL2Q6WN34 429 aa10.7□□□□□ -0.7
PSMA6-213ENST00000556221 SSUH2Q9Y2M2 353 aa10.69□□□□□ -0.7
PSMA6-213ENST00000556221 POTEHQ6S545 545 aa10.65□□□□□ -0.7
PSMA6-213ENST00000556221 SPDYE1Q8NFV5 336 aaPredicted RBP10.61□□□□□ -0.71
PSMA6-213ENST00000556221 PITPNM1O00562 1244 aa10.6□□□□□ -0.71
PSMA6-213ENST00000556221 PABPN1Q86U42 306 aaKnown RBP eCLIP10.59□□□□□ -0.71
PSMA6-213ENST00000556221 SPDYE4A6NLX3 237 aa10.58□□□□□ -0.72
PSMA6-213ENST00000556221 CLEC11AQ9Y240 323 aa10.55□□□□□ -0.72
PSMA6-213ENST00000556221 FXR2P51116 673 aaKnown RBP eCLIP10.47□□□□□ -0.73
PSMA6-213ENST00000556221 PIP4P2Q8N4L2 257 aa10.47□□□□□ -0.73
PSMA6-213ENST00000556221 PRR29P0C7W0 189 aa10.45□□□□□ -0.74
PSMA6-213ENST00000556221 STAG3Q9UJ98 1225 aa10.44□□□□□ -0.74
PSMA6-213ENST00000556221 PRKAR2AP13861 404 aaKnown RBP10.36□□□□□ -0.75
PSMA6-213ENST00000556221 FKBP8Q14318 412 aa10.32□□□□□ -0.76
PSMA6-213ENST00000556221 PROM2Q8N271 834 aa10.31□□□□□ -0.76
PSMA6-213ENST00000556221 HAX1O00165 279 aa10.26□□□□□ -0.77
PSMA6-213ENST00000556221 CHADLQ6NUI6 762 aa10.25□□□□□ -0.77
PSMA6-213ENST00000556221 FARP1Q9Y4F1 1045 aaPredicted RBP10.18□□□□□ -0.78
PSMA6-213ENST00000556221 PLEKHG5O94827 1062 aa10.17□□□□□ -0.78
PSMA6-213ENST00000556221 CREBZFQ9NS37 354 aa10.17□□□□□ -0.78
PSMA6-213ENST00000556221 SP7Q8TDD2 431 aaPredicted RBP10.13□□□□□ -0.79
PSMA6-213ENST00000556221 FBXO3Q9UK99 471 aa10.13□□□□□ -0.79
PSMA6-213ENST00000556221 C19orf67A6NJJ6 358 aa10.12□□□□□ -0.79
PSMA6-213ENST00000556221 NPM1P06748 294 aaKnown RBP eCLIP10.11□□□□□ -0.79
PSMA6-213ENST00000556221 MIER1Q8N108 512 aa10.09□□□□□ -0.79
PSMA6-213ENST00000556221 CD44P16070 742 aaKnown RBP10.06□□□□□ -0.8
PSMA6-213ENST00000556221 PLCD3Q8N3E9 789 aa10.06□□□□□ -0.8
PSMA6-213ENST00000556221 PAK3O75914 559 aaPredicted RBP10.03□□□□□ -0.8
PSMA6-213ENST00000556221 EVX2Q03828 476 aa10.03□□□□□ -0.8
PSMA6-213ENST00000556221 ZBTB47Q9UFB7 747 aaPredicted RBP10.03□□□□□ -0.8
PSMA6-213ENST00000556221 MNX1P50219 401 aaPredicted RBP10□□□□□ -0.81
PSMA6-213ENST00000556221 CLCN6P51797 869 aa9.98□□□□□ -0.81
PSMA6-213ENST00000556221 ZRANB1Q9UGI0 708 aa9.96□□□□□ -0.82
PSMA6-213ENST00000556221 GABBR2O75899 941 aa9.9□□□□□ -0.82
PSMA6-213ENST00000556221 VASPP50552 380 aaPredicted RBP9.9□□□□□ -0.82
PSMA6-213ENST00000556221 ZNF579Q8NAF0 562 aaKnown RBP9.9□□□□□ -0.82
PSMA6-213ENST00000556221 KLHL34Q8N239 644 aa9.86□□□□□ -0.83
PSMA6-213ENST00000556221 TSPYL2Q9H2G4 693 aaPredicted RBP9.86□□□□□ -0.83
PSMA6-213ENST00000556221 RASEFQ8IZ41 740 aa9.8□□□□□ -0.84
PSMA6-213ENST00000556221 FAM212AQ96EL1 285 aa9.8□□□□□ -0.84
PSMA6-213ENST00000556221 NUBP1P53384 320 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms