RNA–Protein interactions for RNA: ENST00000588841.1

C19orf53-203, Transcript of chromosome 19 open reading frame 53, humanhuman

TSL 2

Gene C19orf53, Length 499 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C19orf53-203ENST00000588841 NISCHQ9Y2I1 1504 aa20.17■□□□□ 0.82
C19orf53-203ENST00000588841 CCDC180Q9P1Z9 1646 aa17.8■□□□□ 0.44
C19orf53-203ENST00000588841 ABCC9O60706 1549 aa17.32■□□□□ 0.36
C19orf53-203ENST00000588841 ZCCHC6Q5VYS8 1495 aaKnown RBP16.84■□□□□ 0.29
C19orf53-203ENST00000588841 DCAF8L2P0C7V8 631 aa16.77■□□□□ 0.28
C19orf53-203ENST00000588841 NACADO15069 1562 aa16.73■□□□□ 0.27
C19orf53-203ENST00000588841 MYO15BQ96JP2 1530 aa16.7■□□□□ 0.26
C19orf53-203ENST00000588841 DCAF1Q9Y4B6 1507 aa16.7■□□□□ 0.26
C19orf53-203ENST00000588841 RB1CC1Q8TDY2 1594 aa16.69■□□□□ 0.26
C19orf53-203ENST00000588841 UNC13AQ9UPW8 1703 aa16.32■□□□□ 0.2
C19orf53-203ENST00000588841 SCRIBQ14160 1630 aa16.28■□□□□ 0.2
C19orf53-203ENST00000588841 BICRAQ9NZM4 1560 aa16.26■□□□□ 0.19
C19orf53-203ENST00000588841 PABPN1Q86U42 306 aaKnown RBP eCLIP16.25■□□□□ 0.19
C19orf53-203ENST00000588841 SHROOM4Q9ULL8 1493 aa16.03■□□□□ 0.16
C19orf53-203ENST00000588841 DNAJC5BQ9UF47 199 aa15.93■□□□□ 0.14
C19orf53-203ENST00000588841 EIF4G1Q04637 1599 aaKnown RBP15.78■□□□□ 0.12
C19orf53-203ENST00000588841 CECR2Q9BXF3 1484 aa15.73■□□□□ 0.11
C19orf53-203ENST00000588841 CC2D2AQ9P2K1 1620 aa15.67■□□□□ 0.1
C19orf53-203ENST00000588841 SMARCA4P51532 1647 aa15.6■□□□□ 0.09
C19orf53-203ENST00000588841 BAZ1AQ9NRL2 1556 aaPredicted RBP15.59■□□□□ 0.09
C19orf53-203ENST00000588841 MROH2BQ7Z745 1585 aa15.57■□□□□ 0.08
C19orf53-203ENST00000588841 ATAD2BQ9ULI0 1458 aa15.51■□□□□ 0.07
C19orf53-203ENST00000588841 NCAPD3P42695 1498 aa15.48■□□□□ 0.07
C19orf53-203ENST00000588841 PEG3Q9GZU2 1588 aa15.46■□□□□ 0.07
C19orf53-203ENST00000588841 RSF1Q96T23 1441 aaPredicted RBP15.45■□□□□ 0.06
C19orf53-203ENST00000588841 SMARCA2P51531 1590 aa15.44■□□□□ 0.06
C19orf53-203ENST00000588841 WIZO95785 1651 aa15.38■□□□□ 0.05
C19orf53-203ENST00000588841 HMGXB3Q12766 1538 aa15.38■□□□□ 0.05
C19orf53-203ENST00000588841 BAZ1BQ9UIG0 1483 aaKnown RBP15.34■□□□□ 0.05
C19orf53-203ENST00000588841 TOP2AP11388 1531 aaKnown RBP15.22■□□□□ 0.03
C19orf53-203ENST00000588841 SUPT5HO00267 1087 aaKnown RBP15.14■□□□□ 0.01
C19orf53-203ENST00000588841 CCDC88BA6NC98 1476 aa15.08■□□□□ 0
C19orf53-203ENST00000588841 NESP48681 1621 aa15.06■□□□□ 0
C19orf53-203ENST00000588841 CADPSQ9ULU8 1353 aa15.03■□□□□ -0
C19orf53-203ENST00000588841 LAMC3Q9Y6N6 1575 aa15□□□□□ -0.01
C19orf53-203ENST00000588841 CFTRP13569 1480 aa14.97□□□□□ -0.01
C19orf53-203ENST00000588841 PDS5BQ9NTI5 1447 aa14.9□□□□□ -0.02
C19orf53-203ENST00000588841 ERCC6Q03468 1493 aa14.87□□□□□ -0.03
C19orf53-203ENST00000588841 FANCD2Q9BXW9 1451 aa14.83□□□□□ -0.03
C19orf53-203ENST00000588841 KIF21AQ7Z4S6 1674 aa14.83□□□□□ -0.04
C19orf53-203ENST00000588841 CEP164Q9UPV0 1460 aa14.78□□□□□ -0.04
C19orf53-203ENST00000588841 PRDM2Q13029 1718 aa14.78□□□□□ -0.04
C19orf53-203ENST00000588841 THOC2Q8NI27 1593 aaKnown RBP14.77□□□□□ -0.05
C19orf53-203ENST00000588841 MRC2Q9UBG0 1479 aa14.74□□□□□ -0.05
C19orf53-203ENST00000588841 DNAJC5Q9H3Z4 198 aa14.7□□□□□ -0.06
C19orf53-203ENST00000588841 WDR62O43379 1518 aa14.7□□□□□ -0.06
C19orf53-203ENST00000588841 URB2Q14146 1524 aaKnown RBP14.7□□□□□ -0.06
C19orf53-203ENST00000588841 CUX2O14529 1486 aa14.69□□□□□ -0.06
C19orf53-203ENST00000588841 TOPBP1Q92547 1522 aa14.62□□□□□ -0.07
C19orf53-203ENST00000588841 ABCC8Q09428 1581 aa14.6□□□□□ -0.07
C19orf53-203ENST00000588841 DNMBPQ6XZF7 1577 aa14.6□□□□□ -0.07
C19orf53-203ENST00000588841 CUX1P39880 1505 aa14.59□□□□□ -0.07
C19orf53-203ENST00000588841 WRNQ14191 1432 aaPredicted RBP eCLIP14.52□□□□□ -0.08
C19orf53-203ENST00000588841 POLA1P09884 1462 aaPredicted RBP14.51□□□□□ -0.09
C19orf53-203ENST00000588841 SYNJ1O43426 1573 aa14.49□□□□□ -0.09
C19orf53-203ENST00000588841 FGD5Q6ZNL6 1462 aa14.49□□□□□ -0.09
C19orf53-203ENST00000588841 TOP2BQ02880 1626 aa14.48□□□□□ -0.09
C19orf53-203ENST00000588841 IFT140Q96RY7 1462 aa14.47□□□□□ -0.09
C19orf53-203ENST00000588841 RAD54L2Q9Y4B4 1467 aa14.47□□□□□ -0.09
C19orf53-203ENST00000588841 BIVM-ERCC5R4GMW8 1640 aa14.46□□□□□ -0.09
C19orf53-203ENST00000588841 SOGA1O94964 1423 aa14.46□□□□□ -0.09
C19orf53-203ENST00000588841 TARBP1Q13395 1621 aaKnown RBP14.45□□□□□ -0.1
C19orf53-203ENST00000588841 ZNF608Q9ULD9 1512 aaPredicted RBP14.44□□□□□ -0.1
C19orf53-203ENST00000588841 AQRO60306 1485 aaKnown RBP eCLIP14.38□□□□□ -0.113e-6■□□□□ 10.6
C19orf53-203ENST00000588841 ABCA10Q8WWZ4 1543 aa14.36□□□□□ -0.11
C19orf53-203ENST00000588841 TDRD9Q8NDG6 1382 aaKnown RBP14.36□□□□□ -0.11
C19orf53-203ENST00000588841 WDR97A6NE52 1622 aa14.35□□□□□ -0.11
C19orf53-203ENST00000588841 EIF4G3O43432 1585 aaKnown RBP14.34□□□□□ -0.11
C19orf53-203ENST00000588841 GAPVD1Q14C86 1478 aa14.28□□□□□ -0.12
C19orf53-203ENST00000588841 TRIM41Q8WV44 630 aa14.28□□□□□ -0.12
C19orf53-203ENST00000588841 ABCA5Q8WWZ7 1642 aa14.28□□□□□ -0.12
C19orf53-203ENST00000588841 CHIC1Q5VXU3 224 aa14.26□□□□□ -0.13
C19orf53-203ENST00000588841 GRIN2BQ13224 1484 aa14.25□□□□□ -0.13
C19orf53-203ENST00000588841 SNAPC4Q5SXM2 1469 aa14.22□□□□□ -0.13
C19orf53-203ENST00000588841 KIF27Q86VH2 1401 aa14.2□□□□□ -0.14
C19orf53-203ENST00000588841 PBRM1Q86U86 1689 aa14.2□□□□□ -0.14
C19orf53-203ENST00000588841 RUSC2Q8N2Y8 1516 aa14.19□□□□□ -0.14
C19orf53-203ENST00000588841 MAGI1Q96QZ7 1491 aaPredicted RBP14.18□□□□□ -0.14
C19orf53-203ENST00000588841 ERICH3Q5RHP9 1530 aa14.18□□□□□ -0.14
C19orf53-203ENST00000588841 IGF1RP08069 1367 aa14.18□□□□□ -0.14
C19orf53-203ENST00000588841 SYNJ2O15056 1496 aa14.14□□□□□ -0.15
C19orf53-203ENST00000588841 ADAMTS12P58397 1594 aa14.13□□□□□ -0.15
C19orf53-203ENST00000588841 FBLN2P98095 1184 aa14.12□□□□□ -0.15
C19orf53-203ENST00000588841 OSCARQ8IYS5 282 aa14.12□□□□□ -0.15
C19orf53-203ENST00000588841 FHAD1B1AJZ9 1412 aa14.12□□□□□ -0.15
C19orf53-203ENST00000588841 CHD1O14646 1710 aa14.11□□□□□ -0.15
C19orf53-203ENST00000588841 CHMP7Q8WUX9 453 aaPredicted RBP14.11□□□□□ -0.15
C19orf53-203ENST00000588841 GRIN2AQ12879 1464 aa14.07□□□□□ -0.16
C19orf53-203ENST00000588841 CARMIL1Q5VZK9 1371 aa14.07□□□□□ -0.16
C19orf53-203ENST00000588841 CUL7Q14999 1698 aa14.04□□□□□ -0.16
C19orf53-203ENST00000588841 NUP160Q12769 1436 aa14.03□□□□□ -0.16
C19orf53-203ENST00000588841 EEA1Q15075 1411 aa14.02□□□□□ -0.16
C19orf53-203ENST00000588841 CSRNP3Q8WYN3 585 aa14.02□□□□□ -0.17
C19orf53-203ENST00000588841 CEP170Q5SW79 1584 aa14□□□□□ -0.17
C19orf53-203ENST00000588841 CLASP1Q7Z460 1538 aa14□□□□□ -0.17
C19orf53-203ENST00000588841 PRXQ9BXM0 1461 aa14□□□□□ -0.17
C19orf53-203ENST00000588841 FAM9AQ8IZU1 332 aaPredicted RBP13.99□□□□□ -0.17
C19orf53-203ENST00000588841 RAPGEF2Q9Y4G8 1499 aa13.99□□□□□ -0.17
C19orf53-203ENST00000588841 KIAA0586Q9BVV6 1533 aa13.92□□□□□ -0.18
C19orf53-203ENST00000588841 JPH4Q96JJ6 628 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms