Protein–RNA interactions for Protein: Q9H1E3

NUCKS1, Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1, humanhuman

Known RBP Predictions only

Length 243 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1Q9H1E3 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC27.49■■□□□ 1.99
NUCKS1Q9H1E3 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC27.49■■□□□ 1.99
NUCKS1Q9H1E3 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC27.49■■□□□ 1.99
NUCKS1Q9H1E3 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC27.48■■□□□ 1.99
NUCKS1Q9H1E3 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC27.48■■□□□ 1.99
NUCKS1Q9H1E3 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC27.48■■□□□ 1.99
NUCKS1Q9H1E3 AC044849.2-201ENST00000606596 710 ntBASIC27.48■■□□□ 1.99
NUCKS1Q9H1E3 MEST-211ENST00000437945 1455 ntTSL 5 BASIC27.48■■□□□ 1.99
NUCKS1Q9H1E3 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC27.48■■□□□ 1.99
NUCKS1Q9H1E3 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
NUCKS1Q9H1E3 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC27.47■■□□□ 1.99
NUCKS1Q9H1E3 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC27.47■■□□□ 1.99
NUCKS1Q9H1E3 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC27.47■■□□□ 1.99
NUCKS1Q9H1E3 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC27.46■■□□□ 1.99
NUCKS1Q9H1E3 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC27.46■■□□□ 1.99
NUCKS1Q9H1E3 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
NUCKS1Q9H1E3 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.99
NUCKS1Q9H1E3 CREM-210ENST00000374721 2020 ntTSL 5 BASIC27.45■■□□□ 1.99
NUCKS1Q9H1E3 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.98
NUCKS1Q9H1E3 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC27.45■■□□□ 1.98
NUCKS1Q9H1E3 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC27.44■■□□□ 1.98
NUCKS1Q9H1E3 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC27.44■■□□□ 1.98
NUCKS1Q9H1E3 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC27.44■■□□□ 1.98
NUCKS1Q9H1E3 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC27.43■■□□□ 1.98
NUCKS1Q9H1E3 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
NUCKS1Q9H1E3 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC27.43■■□□□ 1.98
NUCKS1Q9H1E3 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
NUCKS1Q9H1E3 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC27.43■■□□□ 1.98
NUCKS1Q9H1E3 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC27.43■■□□□ 1.98
NUCKS1Q9H1E3 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC27.43■■□□□ 1.98
NUCKS1Q9H1E3 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
NUCKS1Q9H1E3 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC27.43■■□□□ 1.98
NUCKS1Q9H1E3 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
NUCKS1Q9H1E3 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC27.42■■□□□ 1.98
NUCKS1Q9H1E3 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC27.42■■□□□ 1.98
NUCKS1Q9H1E3 AC108673.1-201ENST00000510422 1159 ntBASIC27.42■■□□□ 1.98
NUCKS1Q9H1E3 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
NUCKS1Q9H1E3 AC135983.2-203ENST00000454486 1613 ntBASIC27.41■■□□□ 1.98
NUCKS1Q9H1E3 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC27.41■■□□□ 1.98
NUCKS1Q9H1E3 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
NUCKS1Q9H1E3 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
NUCKS1Q9H1E3 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
NUCKS1Q9H1E3 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC27.39■■□□□ 1.98
NUCKS1Q9H1E3 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
NUCKS1Q9H1E3 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
NUCKS1Q9H1E3 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC27.38■■□□□ 1.97
NUCKS1Q9H1E3 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
NUCKS1Q9H1E3 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC27.37■■□□□ 1.97
NUCKS1Q9H1E3 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
NUCKS1Q9H1E3 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC27.37■■□□□ 1.97
NUCKS1Q9H1E3 EI24-212ENST00000615917 1407 ntTSL 2 BASIC27.36■■□□□ 1.97
NUCKS1Q9H1E3 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
NUCKS1Q9H1E3 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC27.36■■□□□ 1.97
NUCKS1Q9H1E3 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
NUCKS1Q9H1E3 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC27.35■■□□□ 1.97
NUCKS1Q9H1E3 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
NUCKS1Q9H1E3 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC27.34■■□□□ 1.97
NUCKS1Q9H1E3 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
NUCKS1Q9H1E3 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC27.34■■□□□ 1.97
NUCKS1Q9H1E3 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC27.34■■□□□ 1.97
NUCKS1Q9H1E3 AC018358.1-201ENST00000631079 1402 ntBASIC27.33■■□□□ 1.97
NUCKS1Q9H1E3 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
NUCKS1Q9H1E3 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
NUCKS1Q9H1E3 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC27.33■■□□□ 1.97
NUCKS1Q9H1E3 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC27.32■■□□□ 1.96
NUCKS1Q9H1E3 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC27.32■■□□□ 1.96
NUCKS1Q9H1E3 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
NUCKS1Q9H1E3 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC27.32■■□□□ 1.96
NUCKS1Q9H1E3 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC27.32■■□□□ 1.96
NUCKS1Q9H1E3 BOD1-206ENST00000480951 814 ntTSL 2 BASIC27.32■■□□□ 1.96
NUCKS1Q9H1E3 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC27.32■■□□□ 1.96
NUCKS1Q9H1E3 MIR6090-201ENST00000622481 60 ntBASIC27.32■■□□□ 1.96
NUCKS1Q9H1E3 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
NUCKS1Q9H1E3 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC27.31■■□□□ 1.96
NUCKS1Q9H1E3 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC27.31■■□□□ 1.96
NUCKS1Q9H1E3 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC27.31■■□□□ 1.96
NUCKS1Q9H1E3 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
NUCKS1Q9H1E3 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
NUCKS1Q9H1E3 LINC00273-201ENST00000539813 1452 ntBASIC27.3■■□□□ 1.96
NUCKS1Q9H1E3 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC27.3■■□□□ 1.96
NUCKS1Q9H1E3 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
NUCKS1Q9H1E3 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
NUCKS1Q9H1E3 WHAMMP2-203ENST00000563942 1603 ntBASIC27.29■■□□□ 1.96
NUCKS1Q9H1E3 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC27.29■■□□□ 1.96
NUCKS1Q9H1E3 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC27.28■■□□□ 1.96
NUCKS1Q9H1E3 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
NUCKS1Q9H1E3 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC27.28■■□□□ 1.96
NUCKS1Q9H1E3 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC27.27■■□□□ 1.96
NUCKS1Q9H1E3 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC27.27■■□□□ 1.96
NUCKS1Q9H1E3 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC27.26■■□□□ 1.95
NUCKS1Q9H1E3 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC27.25■■□□□ 1.95
NUCKS1Q9H1E3 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC27.25■■□□□ 1.95
NUCKS1Q9H1E3 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
NUCKS1Q9H1E3 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC27.24■■□□□ 1.95
NUCKS1Q9H1E3 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
NUCKS1Q9H1E3 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
NUCKS1Q9H1E3 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC27.23■■□□□ 1.95
NUCKS1Q9H1E3 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
NUCKS1Q9H1E3 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
NUCKS1Q9H1E3 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC27.22■■□□□ 1.95
Retrieved 100 of 98,524 protein–RNA pairs in 211.1 ms