Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC19.12■□□□□ 0.65
VGLL1Q99990 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC19.12■□□□□ 0.65
VGLL1Q99990 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
VGLL1Q99990 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
VGLL1Q99990 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
VGLL1Q99990 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
VGLL1Q99990 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
VGLL1Q99990 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
VGLL1Q99990 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
VGLL1Q99990 MIR762-201ENST00000390236 83 ntBASIC19.09■□□□□ 0.65
VGLL1Q99990 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
VGLL1Q99990 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
VGLL1Q99990 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
VGLL1Q99990 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
VGLL1Q99990 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
VGLL1Q99990 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC19.08■□□□□ 0.64
VGLL1Q99990 SHF-207ENST00000560540 2062 ntTSL 5 BASIC19.07■□□□□ 0.64
VGLL1Q99990 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
VGLL1Q99990 PKM-203ENST00000389093 2279 ntTSL 5 BASIC19.07■□□□□ 0.64
VGLL1Q99990 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC19.07■□□□□ 0.64
VGLL1Q99990 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
VGLL1Q99990 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
VGLL1Q99990 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
VGLL1Q99990 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC19.06■□□□□ 0.64
VGLL1Q99990 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
VGLL1Q99990 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
VGLL1Q99990 AP002414.2-202ENST00000590929 1450 ntBASIC19.06■□□□□ 0.64
VGLL1Q99990 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC19.06■□□□□ 0.64
VGLL1Q99990 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
VGLL1Q99990 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
VGLL1Q99990 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC19.06■□□□□ 0.64
VGLL1Q99990 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC19.06■□□□□ 0.64
VGLL1Q99990 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
VGLL1Q99990 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
VGLL1Q99990 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC19.05■□□□□ 0.64
VGLL1Q99990 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
VGLL1Q99990 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
VGLL1Q99990 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
VGLL1Q99990 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
VGLL1Q99990 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC19.04■□□□□ 0.64
VGLL1Q99990 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
VGLL1Q99990 RPS2-209ENST00000529806 993 ntTSL 3 BASIC19.04■□□□□ 0.64
VGLL1Q99990 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC19.04■□□□□ 0.64
VGLL1Q99990 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
VGLL1Q99990 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
VGLL1Q99990 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
VGLL1Q99990 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC19.04■□□□□ 0.64
VGLL1Q99990 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC19.04■□□□□ 0.64
VGLL1Q99990 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
VGLL1Q99990 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
VGLL1Q99990 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
VGLL1Q99990 CHML-205ENST00000638160 705 ntTSL 3 BASIC19.03■□□□□ 0.64
VGLL1Q99990 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
VGLL1Q99990 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC19.02■□□□□ 0.64
VGLL1Q99990 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC19.02■□□□□ 0.64
VGLL1Q99990 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC19.02■□□□□ 0.63
VGLL1Q99990 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
VGLL1Q99990 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
VGLL1Q99990 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
VGLL1Q99990 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC19.01■□□□□ 0.63
VGLL1Q99990 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
VGLL1Q99990 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC19.01■□□□□ 0.63
VGLL1Q99990 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC19.01■□□□□ 0.63
VGLL1Q99990 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
VGLL1Q99990 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
VGLL1Q99990 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
VGLL1Q99990 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC19■□□□□ 0.63
VGLL1Q99990 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC18.99■□□□□ 0.63
VGLL1Q99990 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC18.99■□□□□ 0.63
VGLL1Q99990 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
VGLL1Q99990 MEST-211ENST00000437945 1455 ntTSL 5 BASIC18.98■□□□□ 0.63
VGLL1Q99990 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
VGLL1Q99990 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
VGLL1Q99990 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
VGLL1Q99990 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC18.98■□□□□ 0.63
VGLL1Q99990 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC18.98■□□□□ 0.63
VGLL1Q99990 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC18.97■□□□□ 0.63
VGLL1Q99990 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC18.97■□□□□ 0.63
VGLL1Q99990 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
VGLL1Q99990 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC18.97■□□□□ 0.63
VGLL1Q99990 AC135983.2-203ENST00000454486 1613 ntBASIC18.96■□□□□ 0.63
VGLL1Q99990 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC18.96■□□□□ 0.63
VGLL1Q99990 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
VGLL1Q99990 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
VGLL1Q99990 AC005559.1-201ENST00000589661 871 ntBASIC18.96■□□□□ 0.63
VGLL1Q99990 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
VGLL1Q99990 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
VGLL1Q99990 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
VGLL1Q99990 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
VGLL1Q99990 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
VGLL1Q99990 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
VGLL1Q99990 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
VGLL1Q99990 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
VGLL1Q99990 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC18.95■□□□□ 0.62
VGLL1Q99990 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
VGLL1Q99990 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
VGLL1Q99990 WHAMMP2-203ENST00000563942 1603 ntBASIC18.93■□□□□ 0.62
VGLL1Q99990 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC18.93■□□□□ 0.62
VGLL1Q99990 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
VGLL1Q99990 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms