Protein–RNA interactions for Protein: Q8HWS3

RFX6, DNA-binding protein RFX6, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX6Q8HWS3 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC26.37■■□□□ 1.81
RFX6Q8HWS3 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC26.36■■□□□ 1.81
RFX6Q8HWS3 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
RFX6Q8HWS3 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC26.36■■□□□ 1.81
RFX6Q8HWS3 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC26.36■■□□□ 1.81
RFX6Q8HWS3 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
RFX6Q8HWS3 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC26.35■■□□□ 1.81
RFX6Q8HWS3 LINC01003-201ENST00000564834 1764 ntBASIC26.34■■□□□ 1.81
RFX6Q8HWS3 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC26.34■■□□□ 1.81
RFX6Q8HWS3 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
RFX6Q8HWS3 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC26.33■■□□□ 1.81
RFX6Q8HWS3 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC26.33■■□□□ 1.81
RFX6Q8HWS3 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC26.33■■□□□ 1.81
RFX6Q8HWS3 CALM3-209ENST00000597743 577 ntTSL 4 BASIC26.33■■□□□ 1.81
RFX6Q8HWS3 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC26.32■■□□□ 1.8
RFX6Q8HWS3 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
RFX6Q8HWS3 BOD1-206ENST00000480951 814 ntTSL 2 BASIC26.32■■□□□ 1.8
RFX6Q8HWS3 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC26.32■■□□□ 1.8
RFX6Q8HWS3 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
RFX6Q8HWS3 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
RFX6Q8HWS3 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC26.31■■□□□ 1.8
RFX6Q8HWS3 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
RFX6Q8HWS3 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC26.31■■□□□ 1.8
RFX6Q8HWS3 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
RFX6Q8HWS3 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC26.3■■□□□ 1.8
RFX6Q8HWS3 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
RFX6Q8HWS3 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
RFX6Q8HWS3 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC26.28■■□□□ 1.8
RFX6Q8HWS3 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
RFX6Q8HWS3 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
RFX6Q8HWS3 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC26.28■■□□□ 1.8
RFX6Q8HWS3 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC26.28■■□□□ 1.8
RFX6Q8HWS3 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC26.28■■□□□ 1.8
RFX6Q8HWS3 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
RFX6Q8HWS3 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC26.27■■□□□ 1.8
RFX6Q8HWS3 AL121749.1-202ENST00000609313 2153 ntBASIC26.27■■□□□ 1.8
RFX6Q8HWS3 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC26.26■■□□□ 1.79
RFX6Q8HWS3 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC26.26■■□□□ 1.79
RFX6Q8HWS3 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
RFX6Q8HWS3 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC26.26■■□□□ 1.79
RFX6Q8HWS3 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC26.26■■□□□ 1.79
RFX6Q8HWS3 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC26.25■■□□□ 1.79
RFX6Q8HWS3 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
RFX6Q8HWS3 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
RFX6Q8HWS3 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC26.23■■□□□ 1.79
RFX6Q8HWS3 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
RFX6Q8HWS3 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC26.23■■□□□ 1.79
RFX6Q8HWS3 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
RFX6Q8HWS3 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
RFX6Q8HWS3 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC26.22■■□□□ 1.79
RFX6Q8HWS3 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
RFX6Q8HWS3 AC021231.2-201ENST00000594613 730 ntBASIC26.22■■□□□ 1.79
RFX6Q8HWS3 SHF-208ENST00000560734 1731 ntTSL 3 BASIC26.22■■□□□ 1.79
RFX6Q8HWS3 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
RFX6Q8HWS3 RPS2P35-201ENST00000443417 897 ntBASIC26.21■■□□□ 1.79
RFX6Q8HWS3 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC26.21■■□□□ 1.79
RFX6Q8HWS3 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
RFX6Q8HWS3 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC26.21■■□□□ 1.79
RFX6Q8HWS3 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
RFX6Q8HWS3 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
RFX6Q8HWS3 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC26.2■■□□□ 1.78
RFX6Q8HWS3 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC26.2■■□□□ 1.78
RFX6Q8HWS3 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC26.2■■□□□ 1.78
RFX6Q8HWS3 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
RFX6Q8HWS3 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC26.19■■□□□ 1.78
RFX6Q8HWS3 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
RFX6Q8HWS3 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC26.19■■□□□ 1.78
RFX6Q8HWS3 DUX4L29-201ENST00000425409 679 ntBASIC26.19■■□□□ 1.78
RFX6Q8HWS3 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC26.19■■□□□ 1.78
RFX6Q8HWS3 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
RFX6Q8HWS3 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC26.19■■□□□ 1.78
RFX6Q8HWS3 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
RFX6Q8HWS3 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
RFX6Q8HWS3 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
RFX6Q8HWS3 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC26.18■■□□□ 1.78
RFX6Q8HWS3 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC26.18■■□□□ 1.78
RFX6Q8HWS3 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
RFX6Q8HWS3 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC26.18■■□□□ 1.78
RFX6Q8HWS3 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC26.17■■□□□ 1.78
RFX6Q8HWS3 AC018358.1-201ENST00000631079 1402 ntBASIC26.17■■□□□ 1.78
RFX6Q8HWS3 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC26.17■■□□□ 1.78
RFX6Q8HWS3 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC26.17■■□□□ 1.78
RFX6Q8HWS3 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
RFX6Q8HWS3 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
RFX6Q8HWS3 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
RFX6Q8HWS3 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC26.15■■□□□ 1.78
RFX6Q8HWS3 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC26.15■■□□□ 1.78
RFX6Q8HWS3 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
RFX6Q8HWS3 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
RFX6Q8HWS3 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
RFX6Q8HWS3 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
RFX6Q8HWS3 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC26.14■■□□□ 1.77
RFX6Q8HWS3 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC26.14■■□□□ 1.77
RFX6Q8HWS3 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
RFX6Q8HWS3 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC26.13■■□□□ 1.77
RFX6Q8HWS3 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
RFX6Q8HWS3 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
RFX6Q8HWS3 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
RFX6Q8HWS3 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC26.12■■□□□ 1.77
RFX6Q8HWS3 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC26.12■■□□□ 1.77
Retrieved 100 of 98,524 protein–RNA pairs in 57.2 ms