Protein–RNA interactions for Protein: Q8HWS3

RFX6, DNA-binding protein RFX6, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX6Q8HWS3 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC34.98■■■■□ 3.19
RFX6Q8HWS3 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC34.95■■■■□ 3.18
RFX6Q8HWS3 AL356512.1-201ENST00000607453 1739 ntBASIC34.36■■■■□ 3.09
RFX6Q8HWS3 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC34.21■■■■□ 3.07
RFX6Q8HWS3 HES6-203ENST00000409160 1600 ntTSL 2 BASIC34.1■■■■□ 3.05
RFX6Q8HWS3 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC34.06■■■■□ 3.04
RFX6Q8HWS3 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC33.9■■■■□ 3.02
RFX6Q8HWS3 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC33.81■■■■□ 3
RFX6Q8HWS3 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC33.7■■■□□ 2.99
RFX6Q8HWS3 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC33.49■■■□□ 2.95
RFX6Q8HWS3 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC33.39■■■□□ 2.94
RFX6Q8HWS3 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC33.32■■■□□ 2.92
RFX6Q8HWS3 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC33.25■■■□□ 2.91
RFX6Q8HWS3 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC33.05■■■□□ 2.88
RFX6Q8HWS3 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC32.91■■■□□ 2.86
RFX6Q8HWS3 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC32.76■■■□□ 2.83
RFX6Q8HWS3 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC32.63■■■□□ 2.81
RFX6Q8HWS3 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC32.57■■■□□ 2.8
RFX6Q8HWS3 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC32.57■■■□□ 2.8
RFX6Q8HWS3 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC32.53■■■□□ 2.8
RFX6Q8HWS3 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC32.34■■■□□ 2.77
RFX6Q8HWS3 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC32.33■■■□□ 2.77
RFX6Q8HWS3 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC32.21■■■□□ 2.75
RFX6Q8HWS3 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC32.18■■■□□ 2.74
RFX6Q8HWS3 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC32.11■■■□□ 2.73
RFX6Q8HWS3 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC32.08■■■□□ 2.73
RFX6Q8HWS3 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC32.08■■■□□ 2.73
RFX6Q8HWS3 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC31.97■■■□□ 2.71
RFX6Q8HWS3 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC31.95■■■□□ 2.71
RFX6Q8HWS3 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC31.91■■■□□ 2.7
RFX6Q8HWS3 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC31.89■■■□□ 2.7
RFX6Q8HWS3 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
RFX6Q8HWS3 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC31.87■■■□□ 2.69
RFX6Q8HWS3 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
RFX6Q8HWS3 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC31.81■■■□□ 2.68
RFX6Q8HWS3 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC31.79■■■□□ 2.68
RFX6Q8HWS3 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
RFX6Q8HWS3 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC31.64■■■□□ 2.65
RFX6Q8HWS3 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC31.61■■■□□ 2.65
RFX6Q8HWS3 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
RFX6Q8HWS3 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.61
RFX6Q8HWS3 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC31.39■■■□□ 2.61
RFX6Q8HWS3 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC31.34■■■□□ 2.61
RFX6Q8HWS3 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC31.31■■■□□ 2.6
RFX6Q8HWS3 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC31.12■■■□□ 2.57
RFX6Q8HWS3 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
RFX6Q8HWS3 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC31.1■■■□□ 2.57
RFX6Q8HWS3 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC31.08■■■□□ 2.57
RFX6Q8HWS3 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC31.05■■■□□ 2.56
RFX6Q8HWS3 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
RFX6Q8HWS3 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC30.98■■■□□ 2.55
RFX6Q8HWS3 ILK-212ENST00000532063 1617 ntTSL 2 BASIC30.96■■■□□ 2.55
RFX6Q8HWS3 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
RFX6Q8HWS3 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
RFX6Q8HWS3 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC30.9■■■□□ 2.54
RFX6Q8HWS3 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
RFX6Q8HWS3 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC30.86■■■□□ 2.53
RFX6Q8HWS3 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
RFX6Q8HWS3 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
RFX6Q8HWS3 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC30.73■■■□□ 2.51
RFX6Q8HWS3 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
RFX6Q8HWS3 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC30.7■■■□□ 2.51
RFX6Q8HWS3 INO80B-203ENST00000409917 796 ntTSL 2 BASIC30.66■■■□□ 2.5
RFX6Q8HWS3 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
RFX6Q8HWS3 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
RFX6Q8HWS3 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC30.64■■■□□ 2.5
RFX6Q8HWS3 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC30.58■■■□□ 2.49
RFX6Q8HWS3 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC30.57■■■□□ 2.49
RFX6Q8HWS3 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC30.56■■■□□ 2.48
RFX6Q8HWS3 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
RFX6Q8HWS3 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.47
RFX6Q8HWS3 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC30.42■■■□□ 2.46
RFX6Q8HWS3 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC30.4■■■□□ 2.46
RFX6Q8HWS3 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
RFX6Q8HWS3 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC30.37■■■□□ 2.45
RFX6Q8HWS3 AC015813.7-201ENST00000623294 581 ntBASIC30.36■■■□□ 2.45
RFX6Q8HWS3 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC30.35■■■□□ 2.45
RFX6Q8HWS3 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC30.32■■■□□ 2.44
RFX6Q8HWS3 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC30.31■■■□□ 2.44
RFX6Q8HWS3 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC30.27■■■□□ 2.44
RFX6Q8HWS3 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC30.25■■■□□ 2.43
RFX6Q8HWS3 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC30.25■■■□□ 2.43
RFX6Q8HWS3 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC30.2■■■□□ 2.42
RFX6Q8HWS3 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC30.17■■■□□ 2.42
RFX6Q8HWS3 AC145285.7-201ENST00000614819 1539 ntBASIC30.16■■■□□ 2.42
RFX6Q8HWS3 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
RFX6Q8HWS3 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
RFX6Q8HWS3 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
RFX6Q8HWS3 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC30■■■□□ 2.39
RFX6Q8HWS3 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC29.99■■■□□ 2.39
RFX6Q8HWS3 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
RFX6Q8HWS3 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
RFX6Q8HWS3 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC29.97■■■□□ 2.39
RFX6Q8HWS3 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
RFX6Q8HWS3 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC29.95■■■□□ 2.38
RFX6Q8HWS3 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC29.92■■■□□ 2.38
RFX6Q8HWS3 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC29.91■■■□□ 2.38
RFX6Q8HWS3 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC29.9■■■□□ 2.38
RFX6Q8HWS3 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC29.89■■■□□ 2.38
RFX6Q8HWS3 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.37
Retrieved 100 of 98,524 protein–RNA pairs in 15.1 ms