Protein–RNA interactions for Protein: Q70E73

RAPH1, Ras-associated and pleckstrin homology domains-containing protein 1, humanhuman

Predictions only

Length 1,250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPH1Q70E73 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
RAPH1Q70E73 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
RAPH1Q70E73 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC25.32■■□□□ 1.64
RAPH1Q70E73 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
RAPH1Q70E73 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
RAPH1Q70E73 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC25.31■■□□□ 1.64
RAPH1Q70E73 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC25.31■■□□□ 1.64
RAPH1Q70E73 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
RAPH1Q70E73 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC25.3■■□□□ 1.64
RAPH1Q70E73 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
RAPH1Q70E73 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC25.3■■□□□ 1.64
RAPH1Q70E73 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
RAPH1Q70E73 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC25.3■■□□□ 1.64
RAPH1Q70E73 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
RAPH1Q70E73 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC25.29■■□□□ 1.64
RAPH1Q70E73 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
RAPH1Q70E73 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
RAPH1Q70E73 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC25.29■■□□□ 1.64
RAPH1Q70E73 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
RAPH1Q70E73 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC25.28■■□□□ 1.64
RAPH1Q70E73 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
RAPH1Q70E73 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC25.28■■□□□ 1.64
RAPH1Q70E73 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
RAPH1Q70E73 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC25.27■■□□□ 1.64
RAPH1Q70E73 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
RAPH1Q70E73 AC108673.1-201ENST00000510422 1159 ntBASIC25.27■■□□□ 1.64
RAPH1Q70E73 SHF-208ENST00000560734 1731 ntTSL 3 BASIC25.26■■□□□ 1.63
RAPH1Q70E73 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC25.26■■□□□ 1.63
RAPH1Q70E73 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC25.26■■□□□ 1.63
RAPH1Q70E73 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC25.25■■□□□ 1.63
RAPH1Q70E73 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
RAPH1Q70E73 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
RAPH1Q70E73 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
RAPH1Q70E73 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC25.24■■□□□ 1.63
RAPH1Q70E73 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC25.24■■□□□ 1.63
RAPH1Q70E73 AP002414.2-202ENST00000590929 1450 ntBASIC25.24■■□□□ 1.63
RAPH1Q70E73 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
RAPH1Q70E73 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
RAPH1Q70E73 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
RAPH1Q70E73 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC25.23■■□□□ 1.63
RAPH1Q70E73 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC25.23■■□□□ 1.63
RAPH1Q70E73 MEST-211ENST00000437945 1455 ntTSL 5 BASIC25.23■■□□□ 1.63
RAPH1Q70E73 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC25.23■■□□□ 1.63
RAPH1Q70E73 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC25.23■■□□□ 1.63
RAPH1Q70E73 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
RAPH1Q70E73 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
RAPH1Q70E73 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
RAPH1Q70E73 SHF-207ENST00000560540 2062 ntTSL 5 BASIC25.22■■□□□ 1.63
RAPH1Q70E73 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
RAPH1Q70E73 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC25.22■■□□□ 1.63
RAPH1Q70E73 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC25.21■■□□□ 1.63
RAPH1Q70E73 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC25.21■■□□□ 1.63
RAPH1Q70E73 MIR6090-201ENST00000622481 60 ntBASIC25.21■■□□□ 1.63
RAPH1Q70E73 AC135983.2-203ENST00000454486 1613 ntBASIC25.21■■□□□ 1.63
RAPH1Q70E73 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
RAPH1Q70E73 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
RAPH1Q70E73 EI24-212ENST00000615917 1407 ntTSL 2 BASIC25.2■■□□□ 1.63
RAPH1Q70E73 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC25.2■■□□□ 1.63
RAPH1Q70E73 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.63
RAPH1Q70E73 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
RAPH1Q70E73 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
RAPH1Q70E73 DUX4L28-201ENST00000623687 678 ntBASIC25.2■■□□□ 1.62
RAPH1Q70E73 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
RAPH1Q70E73 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC25.19■■□□□ 1.62
RAPH1Q70E73 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
RAPH1Q70E73 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC25.19■■□□□ 1.62
RAPH1Q70E73 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
RAPH1Q70E73 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
RAPH1Q70E73 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC25.18■■□□□ 1.62
RAPH1Q70E73 CREM-210ENST00000374721 2020 ntTSL 5 BASIC25.17■■□□□ 1.62
RAPH1Q70E73 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
RAPH1Q70E73 WHAMMP2-203ENST00000563942 1603 ntBASIC25.17■■□□□ 1.62
RAPH1Q70E73 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC25.17■■□□□ 1.62
RAPH1Q70E73 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC25.17■■□□□ 1.62
RAPH1Q70E73 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
RAPH1Q70E73 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
RAPH1Q70E73 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
RAPH1Q70E73 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
RAPH1Q70E73 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC25.16■■□□□ 1.62
RAPH1Q70E73 MIR3665-201ENST00000578708 105 ntBASIC25.16■■□□□ 1.62
RAPH1Q70E73 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC25.15■■□□□ 1.62
RAPH1Q70E73 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC25.15■■□□□ 1.62
RAPH1Q70E73 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
RAPH1Q70E73 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC25.14■■□□□ 1.62
RAPH1Q70E73 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC25.13■■□□□ 1.61
RAPH1Q70E73 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
RAPH1Q70E73 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC25.11■■□□□ 1.61
RAPH1Q70E73 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC25.11■■□□□ 1.61
RAPH1Q70E73 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
RAPH1Q70E73 LINC00273-201ENST00000539813 1452 ntBASIC25.11■■□□□ 1.61
RAPH1Q70E73 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC25.11■■□□□ 1.61
RAPH1Q70E73 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC25.1■■□□□ 1.61
RAPH1Q70E73 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
RAPH1Q70E73 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
RAPH1Q70E73 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC25.1■■□□□ 1.61
RAPH1Q70E73 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC25.09■■□□□ 1.61
RAPH1Q70E73 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC25.09■■□□□ 1.61
RAPH1Q70E73 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC25.09■■□□□ 1.61
RAPH1Q70E73 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC25.09■■□□□ 1.61
RAPH1Q70E73 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC25.09■■□□□ 1.61
Retrieved 100 of 98,524 protein–RNA pairs in 238.2 ms