Protein–RNA interactions for Protein: Q63HN8

RNF213, E3 ubiquitin-protein ligase RNF213, humanhuman

Predictions only

Length 5,207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF213Q63HN8 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.15
RNF213Q63HN8 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
RNF213Q63HN8 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.16
RNF213Q63HN8 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RNF213Q63HN8 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
RNF213Q63HN8 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RNF213Q63HN8 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
RNF213Q63HN8 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RNF213Q63HN8 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
RNF213Q63HN8 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC14.06□□□□□ -0.16
RNF213Q63HN8 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
RNF213Q63HN8 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC14.06□□□□□ -0.16
RNF213Q63HN8 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
RNF213Q63HN8 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RNF213Q63HN8 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC14.06□□□□□ -0.16
RNF213Q63HN8 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC14.06□□□□□ -0.16
RNF213Q63HN8 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC14.06□□□□□ -0.16
RNF213Q63HN8 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
RNF213Q63HN8 AL592293.1-201ENST00000502889 1188 ntBASIC14.05□□□□□ -0.16
RNF213Q63HN8 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
RNF213Q63HN8 BEX3-202ENST00000372634 753 ntTSL 2 BASIC14.05□□□□□ -0.16
RNF213Q63HN8 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC14.05□□□□□ -0.16
RNF213Q63HN8 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
RNF213Q63HN8 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
RNF213Q63HN8 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RNF213Q63HN8 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC14.04□□□□□ -0.16
RNF213Q63HN8 AC104564.3-201ENST00000582367 638 ntBASIC14.04□□□□□ -0.16
RNF213Q63HN8 AC239859.2-201ENST00000444165 318 ntBASIC14.03□□□□□ -0.16
RNF213Q63HN8 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC14.03□□□□□ -0.16
RNF213Q63HN8 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC14.03□□□□□ -0.16
RNF213Q63HN8 AC005837.3-201ENST00000612163 286 ntBASIC14.03□□□□□ -0.16
RNF213Q63HN8 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RNF213Q63HN8 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
RNF213Q63HN8 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
RNF213Q63HN8 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
RNF213Q63HN8 LINC00273-201ENST00000539813 1452 ntBASIC14.02□□□□□ -0.16
RNF213Q63HN8 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC14.02□□□□□ -0.17
RNF213Q63HN8 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC14.02□□□□□ -0.17
RNF213Q63HN8 AC007029.1-201ENST00000604183 313 ntBASIC14.02□□□□□ -0.17
RNF213Q63HN8 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
RNF213Q63HN8 DUX4L9-201ENST00000449051 1259 ntBASIC14.02□□□□□ -0.17
RNF213Q63HN8 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
RNF213Q63HN8 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC14.01□□□□□ -0.17
RNF213Q63HN8 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RNF213Q63HN8 AC103724.3-201ENST00000564481 992 ntBASIC14.01□□□□□ -0.17
RNF213Q63HN8 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC14.01□□□□□ -0.17
RNF213Q63HN8 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
RNF213Q63HN8 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RNF213Q63HN8 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC14□□□□□ -0.17
RNF213Q63HN8 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC14□□□□□ -0.17
RNF213Q63HN8 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
RNF213Q63HN8 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC14□□□□□ -0.17
RNF213Q63HN8 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
RNF213Q63HN8 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RNF213Q63HN8 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RNF213Q63HN8 YBX1P4-201ENST00000392794 808 ntBASIC13.99□□□□□ -0.17
RNF213Q63HN8 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC13.99□□□□□ -0.17
RNF213Q63HN8 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
RNF213Q63HN8 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
RNF213Q63HN8 NALT1-201ENST00000429224 738 ntTSL 5 BASIC13.99□□□□□ -0.17
RNF213Q63HN8 AC133552.2-201ENST00000619106 1032 ntBASIC13.99□□□□□ -0.17
RNF213Q63HN8 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RNF213Q63HN8 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC13.98□□□□□ -0.17
RNF213Q63HN8 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
RNF213Q63HN8 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC13.98□□□□□ -0.17
RNF213Q63HN8 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
RNF213Q63HN8 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC13.98□□□□□ -0.17
RNF213Q63HN8 GRAMD4P7-201ENST00000578182 1232 ntBASIC13.98□□□□□ -0.17
RNF213Q63HN8 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RNF213Q63HN8 PRTG-204ENST00000561292 833 ntTSL 3 BASIC13.97□□□□□ -0.17
RNF213Q63HN8 AC009831.1-201ENST00000580420 1582 ntBASIC13.97□□□□□ -0.17
RNF213Q63HN8 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
RNF213Q63HN8 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC13.97□□□□□ -0.17
RNF213Q63HN8 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
RNF213Q63HN8 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
RNF213Q63HN8 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC13.97□□□□□ -0.17
RNF213Q63HN8 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
RNF213Q63HN8 SMPD5-203ENST00000639008 1464 ntBASIC13.96□□□□□ -0.17
RNF213Q63HN8 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
RNF213Q63HN8 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
RNF213Q63HN8 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC13.96□□□□□ -0.17
RNF213Q63HN8 Z92544.1-202ENST00000571933 1220 ntBASIC13.96□□□□□ -0.17
RNF213Q63HN8 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
RNF213Q63HN8 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
RNF213Q63HN8 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.18
RNF213Q63HN8 GUK1-205ENST00000366722 850 ntTSL 3 BASIC13.96□□□□□ -0.18
RNF213Q63HN8 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RNF213Q63HN8 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RNF213Q63HN8 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC13.95□□□□□ -0.18
RNF213Q63HN8 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC13.95□□□□□ -0.18
RNF213Q63HN8 AC139795.1-202ENST00000500444 432 ntBASIC13.95□□□□□ -0.18
RNF213Q63HN8 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
RNF213Q63HN8 MIR6765-201ENST00000614092 87 ntBASIC13.94□□□□□ -0.18
RNF213Q63HN8 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
RNF213Q63HN8 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
RNF213Q63HN8 AC026271.2-201ENST00000428091 497 ntBASIC13.94□□□□□ -0.18
RNF213Q63HN8 AC026202.3-201ENST00000600805 1127 ntBASIC13.94□□□□□ -0.18
RNF213Q63HN8 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
RNF213Q63HN8 ZNRF2P3-201ENST00000424200 374 ntBASIC13.94□□□□□ -0.18
RNF213Q63HN8 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms