Protein–RNA interactions for Protein: Q5TC12

ATPAF1, ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

Predicted RBP Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1Q5TC12 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
ATPAF1Q5TC12 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
ATPAF1Q5TC12 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
ATPAF1Q5TC12 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
ATPAF1Q5TC12 BOD1-206ENST00000480951 814 ntTSL 2 BASIC21.8■■□□□ 1.08
ATPAF1Q5TC12 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
ATPAF1Q5TC12 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
ATPAF1Q5TC12 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC21.79■■□□□ 1.08
ATPAF1Q5TC12 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC21.79■■□□□ 1.08
ATPAF1Q5TC12 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
ATPAF1Q5TC12 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
ATPAF1Q5TC12 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC21.78■■□□□ 1.08
ATPAF1Q5TC12 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
ATPAF1Q5TC12 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC21.78■■□□□ 1.08
ATPAF1Q5TC12 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
ATPAF1Q5TC12 BX255925.1-201ENST00000566954 1854 ntBASIC21.77■■□□□ 1.08
ATPAF1Q5TC12 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC21.77■■□□□ 1.08
ATPAF1Q5TC12 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
ATPAF1Q5TC12 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC21.77■■□□□ 1.08
ATPAF1Q5TC12 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
ATPAF1Q5TC12 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
ATPAF1Q5TC12 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
ATPAF1Q5TC12 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
ATPAF1Q5TC12 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC21.77■■□□□ 1.07
ATPAF1Q5TC12 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC21.76■■□□□ 1.07
ATPAF1Q5TC12 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC21.76■■□□□ 1.07
ATPAF1Q5TC12 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
ATPAF1Q5TC12 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC21.75■■□□□ 1.07
ATPAF1Q5TC12 CIB2-204ENST00000557846 934 ntTSL 3 BASIC21.75■■□□□ 1.07
ATPAF1Q5TC12 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
ATPAF1Q5TC12 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
ATPAF1Q5TC12 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC21.74■■□□□ 1.07
ATPAF1Q5TC12 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
ATPAF1Q5TC12 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC21.73■■□□□ 1.07
ATPAF1Q5TC12 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
ATPAF1Q5TC12 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
ATPAF1Q5TC12 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
ATPAF1Q5TC12 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
ATPAF1Q5TC12 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
ATPAF1Q5TC12 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC21.72■■□□□ 1.07
ATPAF1Q5TC12 EI24-212ENST00000615917 1407 ntTSL 2 BASIC21.72■■□□□ 1.07
ATPAF1Q5TC12 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
ATPAF1Q5TC12 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
ATPAF1Q5TC12 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
ATPAF1Q5TC12 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC21.72■■□□□ 1.07
ATPAF1Q5TC12 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
ATPAF1Q5TC12 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
ATPAF1Q5TC12 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
ATPAF1Q5TC12 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
ATPAF1Q5TC12 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
ATPAF1Q5TC12 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC21.71■■□□□ 1.07
ATPAF1Q5TC12 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
ATPAF1Q5TC12 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
ATPAF1Q5TC12 AC127502.1-201ENST00000399971 1502 ntBASIC21.7■■□□□ 1.07
ATPAF1Q5TC12 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
ATPAF1Q5TC12 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
ATPAF1Q5TC12 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
ATPAF1Q5TC12 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
ATPAF1Q5TC12 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC21.69■■□□□ 1.06
ATPAF1Q5TC12 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
ATPAF1Q5TC12 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
ATPAF1Q5TC12 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC21.69■■□□□ 1.06
ATPAF1Q5TC12 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
ATPAF1Q5TC12 SHF-208ENST00000560734 1731 ntTSL 3 BASIC21.68■■□□□ 1.06
ATPAF1Q5TC12 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
ATPAF1Q5TC12 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC21.67■■□□□ 1.06
ATPAF1Q5TC12 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
ATPAF1Q5TC12 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
ATPAF1Q5TC12 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
ATPAF1Q5TC12 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC21.67■■□□□ 1.06
ATPAF1Q5TC12 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC21.67■■□□□ 1.06
ATPAF1Q5TC12 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
ATPAF1Q5TC12 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC21.67■■□□□ 1.06
ATPAF1Q5TC12 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
ATPAF1Q5TC12 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC21.66■■□□□ 1.06
ATPAF1Q5TC12 DUX4L29-201ENST00000425409 679 ntBASIC21.66■■□□□ 1.06
ATPAF1Q5TC12 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
ATPAF1Q5TC12 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
ATPAF1Q5TC12 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC21.66■■□□□ 1.06
ATPAF1Q5TC12 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
ATPAF1Q5TC12 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC21.65■■□□□ 1.06
ATPAF1Q5TC12 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC21.65■■□□□ 1.06
ATPAF1Q5TC12 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC21.64■■□□□ 1.06
ATPAF1Q5TC12 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
ATPAF1Q5TC12 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
ATPAF1Q5TC12 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
ATPAF1Q5TC12 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
ATPAF1Q5TC12 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
ATPAF1Q5TC12 AL449106.1-201ENST00000608517 1980 ntBASIC21.63■■□□□ 1.05
ATPAF1Q5TC12 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC21.63■■□□□ 1.05
ATPAF1Q5TC12 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC21.63■■□□□ 1.05
ATPAF1Q5TC12 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
ATPAF1Q5TC12 AC021231.2-201ENST00000594613 730 ntBASIC21.63■■□□□ 1.05
ATPAF1Q5TC12 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC21.63■■□□□ 1.05
ATPAF1Q5TC12 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC21.63■■□□□ 1.05
ATPAF1Q5TC12 PROC-203ENST00000409048 1586 ntTSL 5 BASIC21.62■■□□□ 1.05
ATPAF1Q5TC12 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
ATPAF1Q5TC12 MLEC-202ENST00000412616 841 ntTSL 3 BASIC21.62■■□□□ 1.05
ATPAF1Q5TC12 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
ATPAF1Q5TC12 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC21.62■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 73.8 ms