Protein–RNA interactions for Protein: P61009

SPCS3, Signal peptidase complex subunit 3, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3P61009 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SPCS3P61009 AC100797.4-201ENST00000631653 1827 ntBASIC20.46■□□□□ 0.87
SPCS3P61009 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC20.45■□□□□ 0.86
SPCS3P61009 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SPCS3P61009 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
SPCS3P61009 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SPCS3P61009 CAHM-201ENST00000604200 896 ntBASIC20.44■□□□□ 0.86
SPCS3P61009 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC20.43■□□□□ 0.86
SPCS3P61009 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SPCS3P61009 PKM-204ENST00000449901 2526 ntTSL 2 BASIC20.43■□□□□ 0.86
SPCS3P61009 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
SPCS3P61009 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SPCS3P61009 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC20.43■□□□□ 0.86
SPCS3P61009 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SPCS3P61009 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SPCS3P61009 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
SPCS3P61009 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
SPCS3P61009 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SPCS3P61009 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC20.42■□□□□ 0.86
SPCS3P61009 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC20.42■□□□□ 0.86
SPCS3P61009 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SPCS3P61009 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SPCS3P61009 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC20.42■□□□□ 0.86
SPCS3P61009 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SPCS3P61009 AP002414.2-202ENST00000590929 1450 ntBASIC20.41■□□□□ 0.86
SPCS3P61009 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SPCS3P61009 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
SPCS3P61009 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
SPCS3P61009 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SPCS3P61009 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SPCS3P61009 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SPCS3P61009 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SPCS3P61009 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SPCS3P61009 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
SPCS3P61009 SHF-207ENST00000560540 2062 ntTSL 5 BASIC20.39■□□□□ 0.86
SPCS3P61009 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
SPCS3P61009 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SPCS3P61009 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SPCS3P61009 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
SPCS3P61009 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
SPCS3P61009 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SPCS3P61009 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC20.37■□□□□ 0.85
SPCS3P61009 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC20.37■□□□□ 0.85
SPCS3P61009 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SPCS3P61009 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SPCS3P61009 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
SPCS3P61009 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SPCS3P61009 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC20.36■□□□□ 0.85
SPCS3P61009 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SPCS3P61009 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC20.36■□□□□ 0.85
SPCS3P61009 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC20.36■□□□□ 0.85
SPCS3P61009 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SPCS3P61009 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
SPCS3P61009 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC20.35■□□□□ 0.85
SPCS3P61009 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SPCS3P61009 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
SPCS3P61009 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
SPCS3P61009 AC136428.2-201ENST00000563187 214 ntBASIC20.35■□□□□ 0.85
SPCS3P61009 AC097358.2-201ENST00000607541 1159 ntBASIC20.35■□□□□ 0.85
SPCS3P61009 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
SPCS3P61009 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
SPCS3P61009 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC20.35■□□□□ 0.85
SPCS3P61009 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
SPCS3P61009 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SPCS3P61009 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
SPCS3P61009 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
SPCS3P61009 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
SPCS3P61009 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC20.34■□□□□ 0.85
SPCS3P61009 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
SPCS3P61009 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
SPCS3P61009 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SPCS3P61009 MEST-211ENST00000437945 1455 ntTSL 5 BASIC20.32■□□□□ 0.84
SPCS3P61009 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
SPCS3P61009 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC20.32■□□□□ 0.84
SPCS3P61009 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SPCS3P61009 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC20.32■□□□□ 0.84
SPCS3P61009 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SPCS3P61009 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
SPCS3P61009 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC20.31■□□□□ 0.84
SPCS3P61009 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
SPCS3P61009 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC20.31■□□□□ 0.84
SPCS3P61009 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SPCS3P61009 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC20.3■□□□□ 0.84
SPCS3P61009 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC20.3■□□□□ 0.84
SPCS3P61009 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
SPCS3P61009 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
SPCS3P61009 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SPCS3P61009 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SPCS3P61009 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
SPCS3P61009 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SPCS3P61009 MIR762-201ENST00000390236 83 ntBASIC20.29■□□□□ 0.84
SPCS3P61009 RPS2-209ENST00000529806 993 ntTSL 3 BASIC20.29■□□□□ 0.84
SPCS3P61009 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SPCS3P61009 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC20.29■□□□□ 0.84
SPCS3P61009 PKM-203ENST00000389093 2279 ntTSL 5 BASIC20.29■□□□□ 0.84
SPCS3P61009 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SPCS3P61009 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SPCS3P61009 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC20.28■□□□□ 0.84
SPCS3P61009 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC20.28■□□□□ 0.84
SPCS3P61009 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 331.4 ms