Protein–RNA interactions for Protein: P25106

ACKR3, Atypical chemokine receptor 3, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACKR3P25106 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC21.95■■□□□ 1.1
ACKR3P25106 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
ACKR3P25106 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
ACKR3P25106 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC21.94■■□□□ 1.1
ACKR3P25106 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC21.94■■□□□ 1.1
ACKR3P25106 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
ACKR3P25106 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
ACKR3P25106 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
ACKR3P25106 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
ACKR3P25106 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
ACKR3P25106 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
ACKR3P25106 AP002414.2-202ENST00000590929 1450 ntBASIC21.93■■□□□ 1.1
ACKR3P25106 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
ACKR3P25106 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
ACKR3P25106 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
ACKR3P25106 LINC01003-201ENST00000564834 1764 ntBASIC21.92■■□□□ 1.1
ACKR3P25106 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC21.92■■□□□ 1.1
ACKR3P25106 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
ACKR3P25106 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC21.92■■□□□ 1.1
ACKR3P25106 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
ACKR3P25106 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
ACKR3P25106 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC21.91■■□□□ 1.1
ACKR3P25106 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
ACKR3P25106 CALM3-209ENST00000597743 577 ntTSL 4 BASIC21.91■■□□□ 1.1
ACKR3P25106 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC21.91■■□□□ 1.1
ACKR3P25106 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
ACKR3P25106 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC21.9■■□□□ 1.1
ACKR3P25106 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
ACKR3P25106 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
ACKR3P25106 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
ACKR3P25106 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
ACKR3P25106 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
ACKR3P25106 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
ACKR3P25106 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.09
ACKR3P25106 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.09
ACKR3P25106 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
ACKR3P25106 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
ACKR3P25106 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC21.88■■□□□ 1.09
ACKR3P25106 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
ACKR3P25106 BOD1-206ENST00000480951 814 ntTSL 2 BASIC21.88■■□□□ 1.09
ACKR3P25106 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
ACKR3P25106 AL121749.1-202ENST00000609313 2153 ntBASIC21.88■■□□□ 1.09
ACKR3P25106 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
ACKR3P25106 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
ACKR3P25106 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
ACKR3P25106 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
ACKR3P25106 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC21.86■■□□□ 1.09
ACKR3P25106 AC135731.1-201ENST00000569415 2548 ntBASIC21.86■■□□□ 1.09
ACKR3P25106 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
ACKR3P25106 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC21.85■■□□□ 1.09
ACKR3P25106 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
ACKR3P25106 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
ACKR3P25106 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
ACKR3P25106 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
ACKR3P25106 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC21.84■■□□□ 1.09
ACKR3P25106 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC21.84■■□□□ 1.09
ACKR3P25106 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
ACKR3P25106 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
ACKR3P25106 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.09
ACKR3P25106 RPS2P35-201ENST00000443417 897 ntBASIC21.83■■□□□ 1.09
ACKR3P25106 AC021231.2-201ENST00000594613 730 ntBASIC21.83■■□□□ 1.09
ACKR3P25106 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC21.83■■□□□ 1.08
ACKR3P25106 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC21.83■■□□□ 1.08
ACKR3P25106 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
ACKR3P25106 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
ACKR3P25106 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
ACKR3P25106 SHF-208ENST00000560734 1731 ntTSL 3 BASIC21.82■■□□□ 1.08
ACKR3P25106 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
ACKR3P25106 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC21.81■■□□□ 1.08
ACKR3P25106 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
ACKR3P25106 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
ACKR3P25106 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC21.81■■□□□ 1.08
ACKR3P25106 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
ACKR3P25106 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
ACKR3P25106 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
ACKR3P25106 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC21.79■■□□□ 1.08
ACKR3P25106 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
ACKR3P25106 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
ACKR3P25106 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC21.79■■□□□ 1.08
ACKR3P25106 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
ACKR3P25106 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
ACKR3P25106 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC21.79■■□□□ 1.08
ACKR3P25106 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
ACKR3P25106 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
ACKR3P25106 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
ACKR3P25106 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC21.78■■□□□ 1.08
ACKR3P25106 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
ACKR3P25106 DUX4L29-201ENST00000425409 679 ntBASIC21.78■■□□□ 1.08
ACKR3P25106 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC21.78■■□□□ 1.08
ACKR3P25106 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC21.78■■□□□ 1.08
ACKR3P25106 AC018358.1-201ENST00000631079 1402 ntBASIC21.78■■□□□ 1.08
ACKR3P25106 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
ACKR3P25106 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
ACKR3P25106 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
ACKR3P25106 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
ACKR3P25106 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
ACKR3P25106 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC21.77■■□□□ 1.08
ACKR3P25106 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
ACKR3P25106 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
ACKR3P25106 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 8.4 ms