Protein–RNA interactions for Protein: O15226

NKRF, NF-kappa-B-repressing factor, humanhuman

Known RBP eCLIP

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKRFO15226 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC26.32■■□□□ 1.85e-6■■■■□ 23.2
NKRFO15226 MPP5-207ENST00000557783 567 ntTSL 423.44■■□□□ 1.345e-6■■■■□ 23.2
NKRFO15226 MPP5-206ENST00000557237 479 ntTSL 423.2■■□□□ 1.35e-6■■■■□ 23.2
NKRFO15226 MPP5-202ENST00000554208 2458 ntTSL 220.56■□□□□ 0.885e-6■■■■□ 23.2
NKRFO15226 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.565e-6■■■■□ 23.2
NKRFO15226 MPP5-204ENST00000555925 5006 ntTSL 1 (best) BASIC6.75□□□□□ -1.335e-6■■■■□ 23.2
NKRFO15226 ZBED4-201ENST00000216268 6893 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.653e-6■■■■□ 23.1
NKRFO15226 NFIC-208ENST00000589537 977 ntTSL 219.32■□□□□ 0.686e-7■■■■□ 23.1
NKRFO15226 AP2A2-212ENST00000528195 562 ntTSL 321.17■□□□□ 0.984e-11■■■■□ 23.1
NKRFO15226 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC18.58■□□□□ 0.574e-11■■■■□ 23.1
NKRFO15226 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.34e-11■■■■□ 23.1
NKRFO15226 AP2A2-213ENST00000528815 3072 ntTSL 215.32■□□□□ 0.044e-11■■■■□ 23.1
NKRFO15226 AP2A2-202ENST00000448903 4575 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.134e-11■■■■□ 23.1
NKRFO15226 FARP1-224ENST00000598389 747 ntTSL 57.11□□□□□ -1.271e-10■■■■□ 23.1
NKRFO15226 THUMPD3-AS1-204ENST00000480904 493 ntTSL 35.38□□□□□ -1.551e-10■■■■□ 23.1
NKRFO15226 NRF1-207ENST00000477428 513 ntTSL 317.23■□□□□ 0.352e-7■■■■□ 23.1
NKRFO15226 NRF1-206ENST00000454688 814 ntTSL 516.45■□□□□ 0.222e-7■■■■□ 23.1
NKRFO15226 NRF1-202ENST00000311967 2481 ntTSL 1 (best) BASIC14.37□□□□□ -0.112e-7■■■■□ 23.1
NKRFO15226 NRF1-201ENST00000223190 2424 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.142e-7■■■■□ 23.1
NKRFO15226 NRF1-205ENST00000393232 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.352e-7■■■■□ 23.1
NKRFO15226 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC18.85■□□□□ 0.612e-6■■■■□ 23.1
NKRFO15226 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.522e-6■■■■□ 23.1
NKRFO15226 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC18.17■□□□□ 0.52e-6■■■■□ 23.1
NKRFO15226 HIP1R-202ENST00000452196 2054 ntTSL 1 (best)20.69■□□□□ 0.93e-6■■■■□ 23
NKRFO15226 HIP1R-204ENST00000535831 3078 ntTSL 217.53■□□□□ 0.43e-6■■■■□ 23
NKRFO15226 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.373e-6■■■■□ 23
NKRFO15226 CDK4-214ENST00000552862 447 ntTSL 314.75□□□□□ -0.052e-6■■■■□ 23
NKRFO15226 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC25.3■■□□□ 1.644e-6■■■■□ 23
NKRFO15226 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC22.98■■□□□ 1.274e-6■■■■□ 23
NKRFO15226 SPPL2B-213ENST00000621568 1017 ntTSL 520.5■□□□□ 0.874e-6■■■■□ 23
NKRFO15226 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.34e-6■■■■□ 23
NKRFO15226 SPPL2B-209ENST00000613503 3456 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.034e-6■■■■□ 23
NKRFO15226 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC29.33■■■□□ 2.295e-6■■■■□ 23
NKRFO15226 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.965e-6■■■■□ 23
NKRFO15226 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.955e-6■■■■□ 23
NKRFO15226 CAPRIN1-205ENST00000528856 595 ntTSL 526.95■■□□□ 1.95e-6■■■■□ 23
NKRFO15226 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC24.09■■□□□ 1.455e-6■■■■□ 23
NKRFO15226 RABEP1-207ENST00000575991 551 ntTSL 421.73■■□□□ 1.075e-6■■■■□ 23
NKRFO15226 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC21.34■■□□□ 1.015e-6■■■■□ 23
NKRFO15226 CAPRIN1-217ENST00000534825 668 ntTSL 320.69■□□□□ 0.95e-6■■■■□ 23
NKRFO15226 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.885e-6■■■■□ 23
NKRFO15226 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.865e-6■■■■□ 23
NKRFO15226 ACOX3-207ENST00000514423 584 ntTSL 320.21■□□□□ 0.835e-6■■■■□ 23
NKRFO15226 ACOX3-205ENST00000510365 2050 ntTSL 519.84■□□□□ 0.775e-6■■■■□ 23
NKRFO15226 CAPRIN1-216ENST00000534042 574 ntTSL 519.79■□□□□ 0.765e-6■■■■□ 23
NKRFO15226 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.755e-6■■■■□ 23
NKRFO15226 RABEP1-206ENST00000575475 2768 ntTSL 1 (best)19.7■□□□□ 0.745e-6■■■■□ 23
NKRFO15226 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.675e-6■■■■□ 23
NKRFO15226 TMTC4-204ENST00000423847 639 ntTSL 318.71■□□□□ 0.595e-6■■■■□ 23
NKRFO15226 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC18.29■□□□□ 0.525e-6■■■■□ 23
NKRFO15226 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC18.28■□□□□ 0.525e-6■■■■□ 23
NKRFO15226 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.495e-6■■■■□ 23
NKRFO15226 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.495e-6■■■■□ 23
NKRFO15226 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC17.55■□□□□ 0.45e-6■■■■□ 23
NKRFO15226 LRRC75B-208ENST00000495297 782 ntTSL 317.32■□□□□ 0.365e-6■■■■□ 23
NKRFO15226 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC17.27■□□□□ 0.365e-6■■■■□ 23
NKRFO15226 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.335e-6■■■■□ 23
NKRFO15226 CLPTM1L-214ENST00000513250 567 ntTSL 316.97■□□□□ 0.315e-6■■■■□ 23
NKRFO15226 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.285e-6■■■■□ 23
NKRFO15226 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC16.71■□□□□ 0.275e-6■■■■□ 23
NKRFO15226 USP36-207ENST00000587010 607 ntTSL 316.6■□□□□ 0.255e-6■■■■□ 23
NKRFO15226 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC16.5■□□□□ 0.235e-6■■■■□ 23
NKRFO15226 GGA1-218ENST00000475445 2614 ntTSL 215.88■□□□□ 0.135e-6■■■■□ 23
NKRFO15226 USP36-221ENST00000592231 2479 ntTSL 215.85■□□□□ 0.135e-6■■■■□ 23
NKRFO15226 PDXDC2P-206ENST00000534700 1315 ntBASIC15.84■□□□□ 0.135e-6■■■■□ 23
NKRFO15226 CLPTM1L-203ENST00000503151 627 ntTSL 315.58■□□□□ 0.085e-6■■■■□ 23
NKRFO15226 GGA1-201ENST00000325180 2528 ntTSL 1 (best) BASIC15.42■□□□□ 0.065e-6■■■■□ 23
NKRFO15226 STAG1-206ENST00000480733 1304 ntTSL 2 BASIC15.24■□□□□ 0.035e-6■■■■□ 23
NKRFO15226 CAPRIN1-212ENST00000532820 3438 ntAPPRIS P4 TSL 1 (best) BASIC15.02■□□□□ -05e-6■■■■□ 23
NKRFO15226 CLPTM1L-210ENST00000508765 631 ntTSL 314.95□□□□□ -0.025e-6■■■■□ 23
NKRFO15226 USP36-214ENST00000589225 5885 ntTSL 1 (best)14.92□□□□□ -0.025e-6■■■■□ 23
NKRFO15226 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.045e-6■■■■□ 23
NKRFO15226 PDXDC2P-NPIPB14P-204ENST00000530079 2764 ntTSL 514.71□□□□□ -0.065e-6■■■■□ 23
NKRFO15226 RELT-207ENST00000545886 4346 ntTSL 214.66□□□□□ -0.065e-6■■■■□ 23
NKRFO15226 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC14.55□□□□□ -0.085e-6■■■■□ 23
NKRFO15226 THAP4-203ENST00000402545 833 ntTSL 5 BASIC14.15□□□□□ -0.145e-6■■■■□ 23
NKRFO15226 TMTC4-201ENST00000328767 2101 ntTSL 2 BASIC14.12□□□□□ -0.155e-6■■■■□ 23
NKRFO15226 TMTC4-207ENST00000475272 580 ntTSL 413.74□□□□□ -0.215e-6■■■■□ 23
NKRFO15226 TMTC4-205ENST00000440120 584 ntTSL 413.73□□□□□ -0.215e-6■■■■□ 23
NKRFO15226 ACOX3-201ENST00000356406 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.265e-6■■■■□ 23
NKRFO15226 CAPRIN1-202ENST00000389645 3498 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.265e-6■■■■□ 23
NKRFO15226 PDXDC2P-NPIPB14P-203ENST00000529089 1580 ntTSL 213.3□□□□□ -0.285e-6■■■■□ 23
NKRFO15226 STAG1-203ENST00000434713 5064 ntTSL 5 BASIC12.98□□□□□ -0.335e-6■■■■□ 23
NKRFO15226 PDXDC2P-NPIPB14P-205ENST00000531894 4184 ntTSL 1 (best) BASIC12.88□□□□□ -0.355e-6■■■■□ 23
NKRFO15226 MTRNR2L4-201ENST00000399974 1762 ntAPPRIS P1 BASIC12.3□□□□□ -0.445e-6■■■■□ 23
NKRFO15226 CLPTM1L-202ENST00000503042 3540 ntTSL 212.26□□□□□ -0.455e-6■■■■□ 23
NKRFO15226 USP36-219ENST00000591052 427 ntTSL 311.77□□□□□ -0.535e-6■■■■□ 23
NKRFO15226 USP36-208ENST00000587379 606 ntTSL 311.25□□□□□ -0.615e-6■■■■□ 23
NKRFO15226 CAPRIN1-201ENST00000341394 4108 ntAPPRIS P4 TSL 1 (best) BASIC11.24□□□□□ -0.615e-6■■■■□ 23
NKRFO15226 TMTC4-202ENST00000342624 3602 ntTSL 2 BASIC11.22□□□□□ -0.615e-6■■■■□ 23
NKRFO15226 STAG1-210ENST00000629124 4322 ntTSL 5 BASIC11.1□□□□□ -0.635e-6■■■■□ 23
NKRFO15226 STAG1-207ENST00000483235 5206 ntTSL 1 (best)10.96□□□□□ -0.655e-6■■■■□ 23
NKRFO15226 SPRY4-AS1-204ENST00000510311 591 ntTSL 4 BASIC10.48□□□□□ -0.735e-6■■■■□ 23
NKRFO15226 USP36-211ENST00000588130 602 ntTSL 210.08□□□□□ -0.85e-6■■■■□ 23
NKRFO15226 CAPRIN1-209ENST00000530820 3454 ntAPPRIS ALT2 TSL 5 BASIC9.42□□□□□ -0.95e-6■■■■□ 23
NKRFO15226 RABEP1-201ENST00000341923 2490 ntTSL 1 (best) BASIC8.88□□□□□ -0.995e-6■■■■□ 23
NKRFO15226 STAG1-208ENST00000487065 2914 ntTSL 1 (best)8.53□□□□□ -1.045e-6■■■■□ 23
NKRFO15226 PDXDC2P-205ENST00000534580 566 ntTSL 48.34□□□□□ -1.075e-6■■■■□ 23
NKRFO15226 STAG1-202ENST00000383202 6055 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.115e-6■■■■□ 23
NKRFO15226 KLHL5-201ENST00000261425 3425 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.185e-6■■■■□ 23
Retrieved 100 of 9,198 protein–RNA pairs in 234.3 ms