RNA–Protein interactions for RNA: ENST00000311967.6

NRF1-202, Transcript of nuclear respiratory factor 1, humanhuman

TSL 1 (best) BASIC

Gene NRF1, Length 2,481 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NRF1-202ENST00000311967 NISCHQ9Y2I1 1504 aa25.65■■□□□ 1.7
NRF1-202ENST00000311967 SHROOM4Q9ULL8 1493 aa22.14■■□□□ 1.13
NRF1-202ENST00000311967 CCDC180Q9P1Z9 1646 aa22.05■■□□□ 1.12
NRF1-202ENST00000311967 SUPT5HO00267 1087 aaKnown RBP21.89■■□□□ 1.09
NRF1-202ENST00000311967 ZCCHC6Q5VYS8 1495 aaKnown RBP21.73■■□□□ 1.07
NRF1-202ENST00000311967 ABCC9O60706 1549 aa21.72■■□□□ 1.07
NRF1-202ENST00000311967 HRCP23327 699 aa21.65■■□□□ 1.06
NRF1-202ENST00000311967 MYO15BQ96JP2 1530 aa21.63■■□□□ 1.05
NRF1-202ENST00000311967 CHIC1Q5VXU3 224 aa21.49■■□□□ 1.03
NRF1-202ENST00000311967 PCGF6Q9BYE7 350 aa21.33■■□□□ 1.01
NRF1-202ENST00000311967 PPARGC1BQ86YN6 1023 aaKnown RBP21.2■□□□□ 0.98
NRF1-202ENST00000311967 DCAF8L2P0C7V8 631 aa21.17■□□□□ 0.98
NRF1-202ENST00000311967 DCAF1Q9Y4B6 1507 aa21.14■□□□□ 0.97
NRF1-202ENST00000311967 LOC105371045A0A1W2PR82 267 aa20.92■□□□□ 0.94
NRF1-202ENST00000311967 RB1CC1Q8TDY2 1594 aa20.77■□□□□ 0.92
NRF1-202ENST00000311967 TRIM26Q12899 539 aaPredicted RBP20.76■□□□□ 0.91
NRF1-202ENST00000311967 NACADO15069 1562 aa20.75■□□□□ 0.91
NRF1-202ENST00000311967 ZEB1P37275 1124 aaPredicted RBP20.45■□□□□ 0.86
NRF1-202ENST00000311967 PABPN1Q86U42 306 aaKnown RBP eCLIP20.42■□□□□ 0.86
NRF1-202ENST00000311967 UNC13AQ9UPW8 1703 aa20.35■□□□□ 0.85
NRF1-202ENST00000311967 SCRIBQ14160 1630 aa20.34■□□□□ 0.85
NRF1-202ENST00000311967 RSF1Q96T23 1441 aaPredicted RBP20.33■□□□□ 0.84
NRF1-202ENST00000311967 PELP1Q8IZL8 1130 aaKnown RBP20.31■□□□□ 0.84
NRF1-202ENST00000311967 TRIM41Q8WV44 630 aa20.3■□□□□ 0.84
NRF1-202ENST00000311967 SCAF1Q9H7N4 1312 aaKnown RBP20.29■□□□□ 0.84
NRF1-202ENST00000311967 FAM9AQ8IZU1 332 aaPredicted RBP20.23■□□□□ 0.83
NRF1-202ENST00000311967 BICRAQ9NZM4 1560 aa20.19■□□□□ 0.82
NRF1-202ENST00000311967 EHMT2Q96KQ7 1210 aa20.1■□□□□ 0.81
NRF1-202ENST00000311967 CECR2Q9BXF3 1484 aa19.91■□□□□ 0.78
NRF1-202ENST00000311967 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.91■□□□□ 0.78
NRF1-202ENST00000311967 DNAJC5BQ9UF47 199 aa19.91■□□□□ 0.78
NRF1-202ENST00000311967 MROH2BQ7Z745 1585 aa19.9■□□□□ 0.78
NRF1-202ENST00000311967 ACIN1Q9UKV3 1341 aaKnown RBP19.88■□□□□ 0.77
NRF1-202ENST00000311967 NEUROD1Q13562 356 aa19.85■□□□□ 0.77
NRF1-202ENST00000311967 CCER1Q8TC90 406 aaPredicted RBP19.83■□□□□ 0.77
NRF1-202ENST00000311967 WIZO95785 1651 aa19.79■□□□□ 0.76
NRF1-202ENST00000311967 BAZ1AQ9NRL2 1556 aaPredicted RBP19.75■□□□□ 0.75
NRF1-202ENST00000311967 DIEXFQ68CQ4 756 aaKnown RBP19.71■□□□□ 0.75
NRF1-202ENST00000311967 EIF4G1Q04637 1599 aaKnown RBP19.71■□□□□ 0.75
NRF1-202ENST00000311967 GTF3C3Q9Y5Q9 886 aa19.69■□□□□ 0.74
NRF1-202ENST00000311967 CENPBP07199 599 aaPredicted RBP19.64■□□□□ 0.73
NRF1-202ENST00000311967 WRNQ14191 1432 aaPredicted RBP eCLIP19.6■□□□□ 0.73
NRF1-202ENST00000311967 TTBK1Q5TCY1 1321 aaPredicted RBP19.58■□□□□ 0.73
NRF1-202ENST00000311967 CC2D2AQ9P2K1 1620 aa19.56■□□□□ 0.72
NRF1-202ENST00000311967 TOP2AP11388 1531 aaKnown RBP19.56■□□□□ 0.72
NRF1-202ENST00000311967 ABCC8Q09428 1581 aa19.53■□□□□ 0.72
NRF1-202ENST00000311967 CEP162Q5TB80 1403 aa19.53■□□□□ 0.72
NRF1-202ENST00000311967 CCDC88BA6NC98 1476 aa19.52■□□□□ 0.71
NRF1-202ENST00000311967 SMARCA4P51532 1647 aa19.5■□□□□ 0.71
NRF1-202ENST00000311967 ZNF316A6NFI3 1004 aaPredicted RBP19.43■□□□□ 0.7
NRF1-202ENST00000311967 SMARCA2P51531 1590 aa19.43■□□□□ 0.7
NRF1-202ENST00000311967 SOGA1O94964 1423 aa19.42■□□□□ 0.7
NRF1-202ENST00000311967 TNIKQ9UKE5 1360 aa19.42■□□□□ 0.7
NRF1-202ENST00000311967 MYT1Q01538 1121 aa19.4■□□□□ 0.7
NRF1-202ENST00000311967 YTHDC1Q96MU7 727 aaKnown RBP19.33■□□□□ 0.69
NRF1-202ENST00000311967 RUSC2Q8N2Y8 1516 aa19.32■□□□□ 0.68
NRF1-202ENST00000311967 EEA1Q15075 1411 aa19.32■□□□□ 0.68
NRF1-202ENST00000311967 CSRNP3Q8WYN3 585 aa19.28■□□□□ 0.68
NRF1-202ENST00000311967 UBTFP17480 764 aaKnown RBP19.27■□□□□ 0.68
NRF1-202ENST00000311967 ATAD2BQ9ULI0 1458 aa19.26■□□□□ 0.67
NRF1-202ENST00000311967 MIER1Q8N108 512 aa19.26■□□□□ 0.67
NRF1-202ENST00000311967 GOLGA3Q08378 1498 aa19.23■□□□□ 0.67
NRF1-202ENST00000311967 NCAPD3P42695 1498 aa19.18■□□□□ 0.66
NRF1-202ENST00000311967 PEG3Q9GZU2 1588 aa19.17■□□□□ 0.66
NRF1-202ENST00000311967 HNRNPUL2Q1KMD3 747 aaKnown RBP19.17■□□□□ 0.66
NRF1-202ENST00000311967 BAZ1BQ9UIG0 1483 aaKnown RBP19.12■□□□□ 0.65
NRF1-202ENST00000311967 CEP164Q9UPV0 1460 aa19.06■□□□□ 0.64
NRF1-202ENST00000311967 KIF21BO75037 1637 aa19.06■□□□□ 0.64
NRF1-202ENST00000311967 HMGXB3Q12766 1538 aa19.05■□□□□ 0.64
NRF1-202ENST00000311967 CLIP1P30622 1438 aa19.05■□□□□ 0.64
NRF1-202ENST00000311967 VPS8Q8N3P4 1428 aa19.02■□□□□ 0.64
NRF1-202ENST00000311967 SYNJ1O43426 1573 aa19.01■□□□□ 0.63
NRF1-202ENST00000311967 RAPGEF2Q9Y4G8 1499 aa18.91■□□□□ 0.62
NRF1-202ENST00000311967 APLP2Q06481 763 aa18.9■□□□□ 0.62
NRF1-202ENST00000311967 DHX57Q6P158 1386 aaKnown RBP18.86■□□□□ 0.61
NRF1-202ENST00000311967 SUPT16HQ9Y5B9 1047 aaKnown RBP18.85■□□□□ 0.61
NRF1-202ENST00000311967 NESP48681 1621 aa18.84■□□□□ 0.61
NRF1-202ENST00000311967 RANGAP1P46060 587 aaPredicted RBP18.84■□□□□ 0.61
NRF1-202ENST00000311967 CLSPNQ9HAW4 1339 aa18.83■□□□□ 0.61
NRF1-202ENST00000311967 TOP2BQ02880 1626 aa18.79■□□□□ 0.6
NRF1-202ENST00000311967 BIVM-ERCC5R4GMW8 1640 aa18.73■□□□□ 0.59
NRF1-202ENST00000311967 ARAP1Q96P48 1450 aa18.72■□□□□ 0.59
NRF1-202ENST00000311967 KANK4Q5T7N3 995 aaPredicted RBP18.69■□□□□ 0.58
NRF1-202ENST00000311967 CADPSQ9ULU8 1353 aa18.69■□□□□ 0.58
NRF1-202ENST00000311967 ERICH3Q5RHP9 1530 aa18.69■□□□□ 0.58
NRF1-202ENST00000311967 TSHZ2Q9NRE2 1034 aa18.68■□□□□ 0.58
NRF1-202ENST00000311967 ERCC6Q03468 1493 aa18.67■□□□□ 0.58
NRF1-202ENST00000311967 RRBP1Q9P2E9 1410 aaKnown RBP18.65■□□□□ 0.58
NRF1-202ENST00000311967 PRXQ9BXM0 1461 aa18.64■□□□□ 0.57
NRF1-202ENST00000311967 LAMC3Q9Y6N6 1575 aa18.63■□□□□ 0.57
NRF1-202ENST00000311967 CUX2O14529 1486 aa18.62■□□□□ 0.57
NRF1-202ENST00000311967 KCNH8Q96L42 1107 aa18.58■□□□□ 0.57
NRF1-202ENST00000311967 CFTRP13569 1480 aa18.57■□□□□ 0.56
NRF1-202ENST00000311967 PDS5BQ9NTI5 1447 aa18.56■□□□□ 0.56
NRF1-202ENST00000311967 CCNB3Q8WWL7 1395 aa18.54■□□□□ 0.56
NRF1-202ENST00000311967 KIF21AQ7Z4S6 1674 aa18.53■□□□□ 0.56
NRF1-202ENST00000311967 ANP32EQ9BTT0 268 aa18.53■□□□□ 0.56
NRF1-202ENST00000311967 KIF27Q86VH2 1401 aa18.52■□□□□ 0.56
NRF1-202ENST00000311967 CUX1P39880 1505 aa18.52■□□□□ 0.56
NRF1-202ENST00000311967 MAPKBP1O60336 1514 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms