RNA–Protein interactions for RNA: ENST00000530820.5

CAPRIN1-209, Transcript of cell cycle associated protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CAPRIN1, Length 3,454 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-209ENST00000530820 PELP1Q8IZL8 1130 aaKnown RBP15.46■□□□□ 0.07
CAPRIN1-209ENST00000530820 PPARGC1BQ86YN6 1023 aaKnown RBP15.38■□□□□ 0.05
CAPRIN1-209ENST00000530820 SCAF1Q9H7N4 1312 aaKnown RBP14.95□□□□□ -0.02
CAPRIN1-209ENST00000530820 MYT1Q01538 1121 aa14.94□□□□□ -0.02
CAPRIN1-209ENST00000530820 HRCP23327 699 aa14.93□□□□□ -0.02
CAPRIN1-209ENST00000530820 PRKCSHP14314 528 aaPredicted RBP14.84□□□□□ -0.03
CAPRIN1-209ENST00000530820 PCGF6Q9BYE7 350 aa14.83□□□□□ -0.03
CAPRIN1-209ENST00000530820 BCL11AQ9H165 835 aa14.69□□□□□ -0.06
CAPRIN1-209ENST00000530820 FAM9AQ8IZU1 332 aaPredicted RBP14.6□□□□□ -0.07
CAPRIN1-209ENST00000530820 GTF3C3Q9Y5Q9 886 aa14.41□□□□□ -0.1
CAPRIN1-209ENST00000530820 NEUROD1Q13562 356 aa14.28□□□□□ -0.12
CAPRIN1-209ENST00000530820 YTHDC1Q96MU7 727 aaKnown RBP14.18□□□□□ -0.14
CAPRIN1-209ENST00000530820 CENPBP07199 599 aaPredicted RBP14.15□□□□□ -0.14
CAPRIN1-209ENST00000530820 ACIN1Q9UKV3 1341 aaKnown RBP14.1□□□□□ -0.15
CAPRIN1-209ENST00000530820 TTBK1Q5TCY1 1321 aaPredicted RBP14.03□□□□□ -0.16
CAPRIN1-209ENST00000530820 CSRNP3Q8WYN3 585 aa14.02□□□□□ -0.17
CAPRIN1-209ENST00000530820 ERICH6Q7L0X2 663 aa14□□□□□ -0.17
CAPRIN1-209ENST00000530820 ANO8Q9HCE9 1232 aaPredicted RBP13.94□□□□□ -0.18
CAPRIN1-209ENST00000530820 CCDC136Q96JN2 1154 aa13.94□□□□□ -0.18
CAPRIN1-209ENST00000530820 SUPT5HO00267 1087 aaKnown RBP13.85□□□□□ -0.19
CAPRIN1-209ENST00000530820 ANP32EQ9BTT0 268 aa13.81□□□□□ -0.2
CAPRIN1-209ENST00000530820 PLEKHG5O94827 1062 aa13.77□□□□□ -0.21
CAPRIN1-209ENST00000530820 APLP2Q06481 763 aa13.73□□□□□ -0.21
CAPRIN1-209ENST00000530820 EHMT2Q96KQ7 1210 aa13.7□□□□□ -0.22
CAPRIN1-209ENST00000530820 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.69□□□□□ -0.22
CAPRIN1-209ENST00000530820 RTN4Q9NQC3 1192 aaKnown RBP13.6□□□□□ -0.23
CAPRIN1-209ENST00000530820 BCANQ96GW7 911 aa13.6□□□□□ -0.23
CAPRIN1-209ENST00000530820 LOC105371045A0A1W2PR82 267 aa13.59□□□□□ -0.23
CAPRIN1-209ENST00000530820 SALL2Q9Y467 1007 aaPredicted RBP13.58□□□□□ -0.24
CAPRIN1-209ENST00000530820 SLC24A1O60721 1099 aa13.55□□□□□ -0.24
CAPRIN1-209ENST00000530820 DIEXFQ68CQ4 756 aaKnown RBP13.55□□□□□ -0.24
CAPRIN1-209ENST00000530820 EIF5BO60841 1220 aaKnown RBP13.54□□□□□ -0.24
CAPRIN1-209ENST00000530820 ZEB1P37275 1124 aaPredicted RBP13.49□□□□□ -0.25
CAPRIN1-209ENST00000530820 SHROOM4Q9ULL8 1493 aa13.45□□□□□ -0.26
CAPRIN1-209ENST00000530820 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.42□□□□□ -0.26
CAPRIN1-209ENST00000530820 TRIM26Q12899 539 aaPredicted RBP13.42□□□□□ -0.26
CAPRIN1-209ENST00000530820 TSHZ2Q9NRE2 1034 aa13.39□□□□□ -0.27
CAPRIN1-209ENST00000530820 AEBP2Q6ZN18 517 aaPredicted RBP13.37□□□□□ -0.27
CAPRIN1-209ENST00000530820 MYO15BQ96JP2 1530 aa13.35□□□□□ -0.27
CAPRIN1-209ENST00000530820 CCER1Q8TC90 406 aaPredicted RBP13.32□□□□□ -0.28
CAPRIN1-209ENST00000530820 PODXL2Q9NZ53 605 aa13.28□□□□□ -0.28
CAPRIN1-209ENST00000530820 ITGAEP38570 1179 aa13.24□□□□□ -0.29
CAPRIN1-209ENST00000530820 NBR1Q14596 966 aa13.24□□□□□ -0.29
CAPRIN1-209ENST00000530820 A0A0U1RQG5 324 aaPredicted RBP13.21□□□□□ -0.3
CAPRIN1-209ENST00000530820 PKNOX2Q96KN3 472 aa13.2□□□□□ -0.3
CAPRIN1-209ENST00000530820 DEKP35659 375 aaKnown RBP13.19□□□□□ -0.3
CAPRIN1-209ENST00000530820 SUPT16HQ9Y5B9 1047 aaKnown RBP13.18□□□□□ -0.3
CAPRIN1-209ENST00000530820 MIER1Q8N108 512 aa13.18□□□□□ -0.3
CAPRIN1-209ENST00000530820 CHIC1Q5VXU3 224 aa13.15□□□□□ -0.3
CAPRIN1-209ENST00000530820 TIMELESSQ9UNS1 1208 aa13.14□□□□□ -0.31
CAPRIN1-209ENST00000530820 IL27Q8NEV9 243 aa13.14□□□□□ -0.31
CAPRIN1-209ENST00000530820 UBE2Q2Q8WVN8 375 aa13.11□□□□□ -0.31
CAPRIN1-209ENST00000530820 NISCHQ9Y2I1 1504 aa13.1□□□□□ -0.31
CAPRIN1-209ENST00000530820 RBM19Q9Y4C8 960 aaKnown RBP13.05□□□□□ -0.32
CAPRIN1-209ENST00000530820 MSH5O43196 834 aa13.03□□□□□ -0.32
CAPRIN1-209ENST00000530820 FKBP8Q14318 412 aa12.97□□□□□ -0.33
CAPRIN1-209ENST00000530820 VSIG10Q8N0Z9 540 aa12.91□□□□□ -0.34
CAPRIN1-209ENST00000530820 DAXXQ9UER7 740 aaPredicted RBP12.86□□□□□ -0.35
CAPRIN1-209ENST00000530820 IRX6P78412 446 aaPredicted RBP12.84□□□□□ -0.35
CAPRIN1-209ENST00000530820 MYT1LQ9UL68 1186 aa12.83□□□□□ -0.36
CAPRIN1-209ENST00000530820 ZNF316A6NFI3 1004 aaPredicted RBP12.82□□□□□ -0.36
CAPRIN1-209ENST00000530820 RANGAP1P46060 587 aaPredicted RBP12.81□□□□□ -0.36
CAPRIN1-209ENST00000530820 ARID4BQ4LE39 1312 aaPredicted RBP12.77□□□□□ -0.37
CAPRIN1-209ENST00000530820 ZMYND15Q9H091 742 aa12.76□□□□□ -0.37
CAPRIN1-209ENST00000530820 C11orf95C9JLR9 678 aaPredicted RBP12.75□□□□□ -0.37
CAPRIN1-209ENST00000530820 RTL5Q5HYW3 569 aaPredicted RBP12.74□□□□□ -0.37
CAPRIN1-209ENST00000530820 KCNH8Q96L42 1107 aa12.72□□□□□ -0.37
CAPRIN1-209ENST00000530820 NEFLP07196 543 aa12.71□□□□□ -0.37
CAPRIN1-209ENST00000530820 BCL11BQ9C0K0 894 aaPredicted RBP12.71□□□□□ -0.38
CAPRIN1-209ENST00000530820 TRIM41Q8WV44 630 aa12.7□□□□□ -0.38
CAPRIN1-209ENST00000530820 PDE4CQ08493 712 aa12.68□□□□□ -0.38
CAPRIN1-209ENST00000530820 AMER1Q5JTC6 1135 aaPredicted RBP12.66□□□□□ -0.38
CAPRIN1-209ENST00000530820 BRPF3Q9ULD4 1205 aa12.64□□□□□ -0.39
CAPRIN1-209ENST00000530820 PAK3O75914 559 aaPredicted RBP12.63□□□□□ -0.39
CAPRIN1-209ENST00000530820 DCAF1Q9Y4B6 1507 aa12.62□□□□□ -0.39
CAPRIN1-209ENST00000530820 TRIM52Q96A61 297 aa12.62□□□□□ -0.39
CAPRIN1-209ENST00000530820 LAS1LQ9Y4W2 734 aaKnown RBP12.58□□□□□ -0.39
CAPRIN1-209ENST00000530820 ARXQ96QS3 562 aa12.57□□□□□ -0.4
CAPRIN1-209ENST00000530820 RBM10P98175 930 aaKnown RBP12.56□□□□□ -0.4
CAPRIN1-209ENST00000530820 NPM2Q86SE8 214 aaKnown RBP12.56□□□□□ -0.4
CAPRIN1-209ENST00000530820 CDK11AQ9UQ88 783 aaPredicted RBP12.56□□□□□ -0.4
CAPRIN1-209ENST00000530820 ERICH6BQ5W0A0 696 aa12.53□□□□□ -0.4
CAPRIN1-209ENST00000530820 KLHL34Q8N239 644 aa12.53□□□□□ -0.4
CAPRIN1-209ENST00000530820 GLIPR1L2Q4G1C9 344 aa12.52□□□□□ -0.4
CAPRIN1-209ENST00000530820 CCDC180Q9P1Z9 1646 aa12.51□□□□□ -0.41
CAPRIN1-209ENST00000530820 PDIA4P13667 645 aaKnown RBP12.51□□□□□ -0.41
CAPRIN1-209ENST00000530820 HNRNPUL2Q1KMD3 747 aaKnown RBP12.5□□□□□ -0.41
CAPRIN1-209ENST00000530820 PAXIP1Q6ZW49 1069 aaPredicted RBP12.49□□□□□ -0.41
CAPRIN1-209ENST00000530820 ARID3AQ99856 593 aa12.47□□□□□ -0.41
CAPRIN1-209ENST00000530820 NOP58Q9Y2X3 529 aaKnown RBP12.46□□□□□ -0.41
CAPRIN1-209ENST00000530820 CLSPNQ9HAW4 1339 aa12.46□□□□□ -0.42
CAPRIN1-209ENST00000530820 NEFMP07197 916 aa12.42□□□□□ -0.42
CAPRIN1-209ENST00000530820 SENP3-EIF4A1A0A087X0R7 540 aa12.41□□□□□ -0.42
CAPRIN1-209ENST00000530820 FGD1P98174 961 aa12.41□□□□□ -0.42
CAPRIN1-209ENST00000530820 USP35Q9P2H5 1018 aa12.39□□□□□ -0.43
CAPRIN1-209ENST00000530820 DCAF8L2P0C7V8 631 aa12.37□□□□□ -0.43
CAPRIN1-209ENST00000530820 MAPK8IP2Q13387 824 aaPredicted RBP12.37□□□□□ -0.43
CAPRIN1-209ENST00000530820 NAP1L5Q96NT1 182 aaPredicted RBP12.36□□□□□ -0.43
CAPRIN1-209ENST00000530820 AAMPQ13685 434 aa12.36□□□□□ -0.43
CAPRIN1-209ENST00000530820 DHX37Q8IY37 1157 aaKnown RBP12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms