RNA–Protein interactions for RNA: ENST00000527016.1

PDXDC2P-202, Transcript of pyridoxal dependent decarboxylase domain containing 2, pseudogene, humanhuman

TSL 3 BASIC

Gene PDXDC2P, Length 543 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC2P-202ENST00000527016 NISCHQ9Y2I1 1504 aa51.6■■■■■ 5.85
PDXDC2P-202ENST00000527016 ABCC9O60706 1549 aa46.8■■■■■ 5.08
PDXDC2P-202ENST00000527016 CCDC180Q9P1Z9 1646 aa46.43■■■■■ 5.02
PDXDC2P-202ENST00000527016 RB1CC1Q8TDY2 1594 aa44.37■■■■■ 4.69
PDXDC2P-202ENST00000527016 DNAJC5BQ9UF47 199 aa44.08■■■■■ 4.65
PDXDC2P-202ENST00000527016 NACADO15069 1562 aa43.95■■■■■ 4.63
PDXDC2P-202ENST00000527016 DCAF8L2P0C7V8 631 aa43.89■■■■■ 4.62
PDXDC2P-202ENST00000527016 PABPN1Q86U42 306 aaKnown RBP eCLIP43.55■■■■■ 4.56
PDXDC2P-202ENST00000527016 UNC13AQ9UPW8 1703 aa43.4■■■■■ 4.54
PDXDC2P-202ENST00000527016 MYO15BQ96JP2 1530 aa43.16■■■■■ 4.5
PDXDC2P-202ENST00000527016 BICRAQ9NZM4 1560 aa43.04■■■■■ 4.48
PDXDC2P-202ENST00000527016 ZCCHC6Q5VYS8 1495 aaKnown RBP42.68■■■■■ 4.42
PDXDC2P-202ENST00000527016 DCAF1Q9Y4B6 1507 aa42.52■■■■■ 4.4
PDXDC2P-202ENST00000527016 SCRIBQ14160 1630 aa42.4■■■■■ 4.38
PDXDC2P-202ENST00000527016 SHROOM4Q9ULL8 1493 aa42.36■■■■■ 4.37
PDXDC2P-202ENST00000527016 CC2D2AQ9P2K1 1620 aa42.23■■■■■ 4.35
PDXDC2P-202ENST00000527016 CECR2Q9BXF3 1484 aa42.16■■■■■ 4.34
PDXDC2P-202ENST00000527016 EIF4G1Q04637 1599 aaKnown RBP42.04■■■■■ 4.32
PDXDC2P-202ENST00000527016 DNAJC5Q9H3Z4 198 aa40.67■■■■■ 4.1
PDXDC2P-202ENST00000527016 NCAPD3P42695 1498 aa40.55■■■■■ 4.08
PDXDC2P-202ENST00000527016 ERCC6Q03468 1493 aa40.45■■■■■ 4.07
PDXDC2P-202ENST00000527016 ATAD2BQ9ULI0 1458 aa40.42■■■■■ 4.06
PDXDC2P-202ENST00000527016 CUX2O14529 1486 aa40.37■■■■■ 4.05
PDXDC2P-202ENST00000527016 SMARCA4P51532 1647 aa40.34■■■■■ 4.05
PDXDC2P-202ENST00000527016 SMARCA2P51531 1590 aa40.31■■■■■ 4.04
PDXDC2P-202ENST00000527016 HMGXB3Q12766 1538 aa40.24■■■■■ 4.03
PDXDC2P-202ENST00000527016 NESP48681 1621 aa40.1■■■■■ 4.01
PDXDC2P-202ENST00000527016 BAZ1AQ9NRL2 1556 aaPredicted RBP40.1■■■■■ 4.01
PDXDC2P-202ENST00000527016 BAZ1BQ9UIG0 1483 aaKnown RBP40.07■■■■■ 4.01
PDXDC2P-202ENST00000527016 PEG3Q9GZU2 1588 aa39.86■■■■□ 3.97
PDXDC2P-202ENST00000527016 MROH2BQ7Z745 1585 aa39.79■■■■□ 3.96
PDXDC2P-202ENST00000527016 LAMC3Q9Y6N6 1575 aa39.73■■■■□ 3.95
PDXDC2P-202ENST00000527016 THOC2Q8NI27 1593 aaKnown RBP39.72■■■■□ 3.95
PDXDC2P-202ENST00000527016 KIF21AQ7Z4S6 1674 aa39.6■■■■□ 3.93
PDXDC2P-202ENST00000527016 PDS5BQ9NTI5 1447 aa39.52■■■■□ 3.92
PDXDC2P-202ENST00000527016 WIZO95785 1651 aa39.35■■■■□ 3.89
PDXDC2P-202ENST00000527016 CADPSQ9ULU8 1353 aa39.34■■■■□ 3.89
PDXDC2P-202ENST00000527016 MRC2Q9UBG0 1479 aa39.21■■■■□ 3.87
PDXDC2P-202ENST00000527016 WDR62O43379 1518 aa39.09■■■■□ 3.85
PDXDC2P-202ENST00000527016 CEP164Q9UPV0 1460 aa39.01■■■■□ 3.84
PDXDC2P-202ENST00000527016 TRIM41Q8WV44 630 aa38.94■■■■□ 3.82
PDXDC2P-202ENST00000527016 FANCD2Q9BXW9 1451 aa38.93■■■■□ 3.82
PDXDC2P-202ENST00000527016 RSF1Q96T23 1441 aaPredicted RBP38.83■■■■□ 3.81
PDXDC2P-202ENST00000527016 CFTRP13569 1480 aa38.81■■■■□ 3.8
PDXDC2P-202ENST00000527016 TOP2AP11388 1531 aaKnown RBP38.78■■■■□ 3.8
PDXDC2P-202ENST00000527016 URB2Q14146 1524 aaKnown RBP38.62■■■■□ 3.77
PDXDC2P-202ENST00000527016 OSCARQ8IYS5 282 aa38.53■■■■□ 3.76
PDXDC2P-202ENST00000527016 PRDM2Q13029 1718 aa38.49■■■■□ 3.75
PDXDC2P-202ENST00000527016 CCDC88BA6NC98 1476 aa38.35■■■■□ 3.73
PDXDC2P-202ENST00000527016 IFT140Q96RY7 1462 aa38.22■■■■□ 3.71
PDXDC2P-202ENST00000527016 ZNF608Q9ULD9 1512 aaPredicted RBP38.21■■■■□ 3.71
PDXDC2P-202ENST00000527016 TOPBP1Q92547 1522 aa38.16■■■■□ 3.7
PDXDC2P-202ENST00000527016 RIMBP3CA6NJZ7 1639 aa38.08■■■■□ 3.69
PDXDC2P-202ENST00000527016 RIMBP3BA6NNM3 1639 aa38.08■■■■□ 3.69
PDXDC2P-202ENST00000527016 RIMBP3Q9UFD9 1639 aa38.08■■■■□ 3.69
PDXDC2P-202ENST00000527016 ABCC8Q09428 1581 aa38.03■■■■□ 3.68
PDXDC2P-202ENST00000527016 EIF4G3O43432 1585 aaKnown RBP38■■■■□ 3.67
PDXDC2P-202ENST00000527016 DNMBPQ6XZF7 1577 aa38■■■■□ 3.67
PDXDC2P-202ENST00000527016 ARHGEF11O15085 1522 aa37.9■■■■□ 3.66
PDXDC2P-202ENST00000527016 AQRO60306 1485 aaKnown RBP eCLIP37.84■■■■□ 3.65
PDXDC2P-202ENST00000527016 CHD1O14646 1710 aa37.82■■■■□ 3.65
PDXDC2P-202ENST00000527016 TARBP1Q13395 1621 aaKnown RBP37.82■■■■□ 3.64
PDXDC2P-202ENST00000527016 FBLN2P98095 1184 aa37.76■■■■□ 3.64
PDXDC2P-202ENST00000527016 POLA1P09884 1462 aaPredicted RBP37.74■■■■□ 3.63
PDXDC2P-202ENST00000527016 CYB5RLQ6IPT4 315 aa37.7■■■■□ 3.63
PDXDC2P-202ENST00000527016 RAD54L2Q9Y4B4 1467 aa37.66■■■■□ 3.62
PDXDC2P-202ENST00000527016 SOGA1O94964 1423 aa37.6■■■■□ 3.61
PDXDC2P-202ENST00000527016 TDRD9Q8NDG6 1382 aaKnown RBP37.57■■■■□ 3.61
PDXDC2P-202ENST00000527016 FGD5Q6ZNL6 1462 aa37.5■■■■□ 3.59
PDXDC2P-202ENST00000527016 ARAP1Q96P48 1450 aa37.5■■■■□ 3.59
PDXDC2P-202ENST00000527016 SNAPC4Q5SXM2 1469 aa37.45■■■■□ 3.59
PDXDC2P-202ENST00000527016 TRHP20396 242 aaPredicted RBP37.45■■■■□ 3.59
PDXDC2P-202ENST00000527016 CUX1P39880 1505 aa37.4■■■■□ 3.58
PDXDC2P-202ENST00000527016 WDR97A6NE52 1622 aa37.38■■■■□ 3.57
PDXDC2P-202ENST00000527016 CHMP7Q8WUX9 453 aaPredicted RBP37.37■■■■□ 3.57
PDXDC2P-202ENST00000527016 MAGI1Q96QZ7 1491 aaPredicted RBP37.29■■■■□ 3.56
PDXDC2P-202ENST00000527016 SYNJ1O43426 1573 aa37.29■■■■□ 3.56
PDXDC2P-202ENST00000527016 GRIN2BQ13224 1484 aa37.28■■■■□ 3.56
PDXDC2P-202ENST00000527016 CLASP1Q7Z460 1538 aa37.27■■■■□ 3.56
PDXDC2P-202ENST00000527016 SYNJ2O15056 1496 aa37.19■■■■□ 3.54
PDXDC2P-202ENST00000527016 PBRM1Q86U86 1689 aa37.18■■■■□ 3.54
PDXDC2P-202ENST00000527016 GAPVD1Q14C86 1478 aa37.13■■■■□ 3.53
PDXDC2P-202ENST00000527016 SUPT5HO00267 1087 aaKnown RBP37.08■■■■□ 3.53
PDXDC2P-202ENST00000527016 ABCA10Q8WWZ4 1543 aa37■■■■□ 3.51
PDXDC2P-202ENST00000527016 ABCA5Q8WWZ7 1642 aa36.99■■■■□ 3.51
PDXDC2P-202ENST00000527016 WRNQ14191 1432 aaPredicted RBP eCLIP36.84■■■■□ 3.49
PDXDC2P-202ENST00000527016 GRIN2AQ12879 1464 aa36.8■■■■□ 3.48
PDXDC2P-202ENST00000527016 ADAMTS12P58397 1594 aa36.76■■■■□ 3.48
PDXDC2P-202ENST00000527016 ERCC6L2Q5T890 1561 aa36.74■■■■□ 3.47
PDXDC2P-202ENST00000527016 BIVM-ERCC5R4GMW8 1640 aa36.73■■■■□ 3.47
PDXDC2P-202ENST00000527016 TOP2BQ02880 1626 aa36.71■■■■□ 3.47
PDXDC2P-202ENST00000527016 CEP170Q5SW79 1584 aa36.7■■■■□ 3.47
PDXDC2P-202ENST00000527016 NUP160Q12769 1436 aa36.64■■■■□ 3.46
PDXDC2P-202ENST00000527016 FHAD1B1AJZ9 1412 aa36.63■■■■□ 3.45
PDXDC2P-202ENST00000527016 AEBP2Q6ZN18 517 aaPredicted RBP36.57■■■■□ 3.44
PDXDC2P-202ENST00000527016 ERICH3Q5RHP9 1530 aa36.54■■■■□ 3.44
PDXDC2P-202ENST00000527016 SHROOM2Q13796 1616 aa36.53■■■■□ 3.44
PDXDC2P-202ENST00000527016 PRG4Q92954 1404 aaPredicted RBP36.4■■■■□ 3.42
PDXDC2P-202ENST00000527016 JPH4Q96JJ6 628 aa36.33■■■■□ 3.41
PDXDC2P-202ENST00000527016 KIF13AQ9H1H9 1805 aa36.26■■■■□ 3.39
Retrieved 100 of 20,778 RNA–protein pairs in 120.2 ms