RNA–Protein interactions for RNA: ENST00000393232.5

NRF1-205, Transcript of nuclear respiratory factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NRF1, Length 3,528 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NRF1-205ENST00000393232 NISCHQ9Y2I1 1504 aa24.29■■□□□ 1.48
NRF1-205ENST00000393232 CCDC180Q9P1Z9 1646 aa21.36■■□□□ 1.01
NRF1-205ENST00000393232 SHROOM4Q9ULL8 1493 aa20.4■□□□□ 0.86
NRF1-205ENST00000393232 ZCCHC6Q5VYS8 1495 aaKnown RBP20.39■□□□□ 0.85
NRF1-205ENST00000393232 ABCC9O60706 1549 aa20.26■□□□□ 0.83
NRF1-205ENST00000393232 DCAF1Q9Y4B6 1507 aa20.12■□□□□ 0.81
NRF1-205ENST00000393232 SUPT5HO00267 1087 aaKnown RBP20.02■□□□□ 0.79
NRF1-205ENST00000393232 MYO15BQ96JP2 1530 aa19.97■□□□□ 0.79
NRF1-205ENST00000393232 DCAF8L2P0C7V8 631 aa19.92■□□□□ 0.78
NRF1-205ENST00000393232 NACADO15069 1562 aa19.88■□□□□ 0.77
NRF1-205ENST00000393232 RB1CC1Q8TDY2 1594 aa19.75■□□□□ 0.75
NRF1-205ENST00000393232 SCRIBQ14160 1630 aa19.54■□□□□ 0.72
NRF1-205ENST00000393232 UNC13AQ9UPW8 1703 aa19.47■□□□□ 0.71
NRF1-205ENST00000393232 CHIC1Q5VXU3 224 aa19.35■□□□□ 0.69
NRF1-205ENST00000393232 BICRAQ9NZM4 1560 aa19.22■□□□□ 0.67
NRF1-205ENST00000393232 PABPN1Q86U42 306 aaKnown RBP eCLIP19.01■□□□□ 0.63
NRF1-205ENST00000393232 LOC105371045A0A1W2PR82 267 aa18.91■□□□□ 0.62
NRF1-205ENST00000393232 PCGF6Q9BYE7 350 aa18.88■□□□□ 0.61
NRF1-205ENST00000393232 CECR2Q9BXF3 1484 aa18.88■□□□□ 0.61
NRF1-205ENST00000393232 HRCP23327 699 aa18.78■□□□□ 0.6
NRF1-205ENST00000393232 BAZ1AQ9NRL2 1556 aaPredicted RBP18.77■□□□□ 0.59
NRF1-205ENST00000393232 MROH2BQ7Z745 1585 aa18.76■□□□□ 0.59
NRF1-205ENST00000393232 SMARCA4P51532 1647 aa18.75■□□□□ 0.59
NRF1-205ENST00000393232 RSF1Q96T23 1441 aaPredicted RBP18.73■□□□□ 0.59
NRF1-205ENST00000393232 WIZO95785 1651 aa18.62■□□□□ 0.57
NRF1-205ENST00000393232 EIF4G1Q04637 1599 aaKnown RBP18.62■□□□□ 0.57
NRF1-205ENST00000393232 PPARGC1BQ86YN6 1023 aaKnown RBP18.57■□□□□ 0.56
NRF1-205ENST00000393232 PEG3Q9GZU2 1588 aa18.56■□□□□ 0.56
NRF1-205ENST00000393232 FAM9AQ8IZU1 332 aaPredicted RBP18.55■□□□□ 0.56
NRF1-205ENST00000393232 TRIM41Q8WV44 630 aa18.54■□□□□ 0.56
NRF1-205ENST00000393232 EHMT2Q96KQ7 1210 aa18.51■□□□□ 0.55
NRF1-205ENST00000393232 ATAD2BQ9ULI0 1458 aa18.45■□□□□ 0.54
NRF1-205ENST00000393232 SMARCA2P51531 1590 aa18.44■□□□□ 0.54
NRF1-205ENST00000393232 TOP2AP11388 1531 aaKnown RBP18.41■□□□□ 0.54
NRF1-205ENST00000393232 CC2D2AQ9P2K1 1620 aa18.4■□□□□ 0.54
NRF1-205ENST00000393232 TRIM26Q12899 539 aaPredicted RBP18.38■□□□□ 0.53
NRF1-205ENST00000393232 NCAPD3P42695 1498 aa18.33■□□□□ 0.53
NRF1-205ENST00000393232 HMGXB3Q12766 1538 aa18.33■□□□□ 0.52
NRF1-205ENST00000393232 BAZ1BQ9UIG0 1483 aaKnown RBP18.31■□□□□ 0.52
NRF1-205ENST00000393232 CCDC88BA6NC98 1476 aa18.18■□□□□ 0.5
NRF1-205ENST00000393232 DNAJC5BQ9UF47 199 aa18.07■□□□□ 0.48
NRF1-205ENST00000393232 ABCC8Q09428 1581 aa17.93■□□□□ 0.46
NRF1-205ENST00000393232 ZEB1P37275 1124 aaPredicted RBP17.9■□□□□ 0.46
NRF1-205ENST00000393232 TTBK1Q5TCY1 1321 aaPredicted RBP17.89■□□□□ 0.45
NRF1-205ENST00000393232 PRDM2Q13029 1718 aa17.88■□□□□ 0.45
NRF1-205ENST00000393232 CFTRP13569 1480 aa17.87■□□□□ 0.45
NRF1-205ENST00000393232 CADPSQ9ULU8 1353 aa17.81■□□□□ 0.44
NRF1-205ENST00000393232 SOGA1O94964 1423 aa17.79■□□□□ 0.44
NRF1-205ENST00000393232 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.79■□□□□ 0.44
NRF1-205ENST00000393232 LAMC3Q9Y6N6 1575 aa17.76■□□□□ 0.43
NRF1-205ENST00000393232 NESP48681 1621 aa17.76■□□□□ 0.43
NRF1-205ENST00000393232 RUSC2Q8N2Y8 1516 aa17.72■□□□□ 0.43
NRF1-205ENST00000393232 UBTFP17480 764 aaKnown RBP17.71■□□□□ 0.42
NRF1-205ENST00000393232 CCER1Q8TC90 406 aaPredicted RBP17.69■□□□□ 0.42
NRF1-205ENST00000393232 CSRNP3Q8WYN3 585 aa17.68■□□□□ 0.42
NRF1-205ENST00000393232 CEP162Q5TB80 1403 aa17.67■□□□□ 0.42
NRF1-205ENST00000393232 FANCD2Q9BXW9 1451 aa17.63■□□□□ 0.41
NRF1-205ENST00000393232 SYNJ1O43426 1573 aa17.63■□□□□ 0.41
NRF1-205ENST00000393232 KIF21AQ7Z4S6 1674 aa17.62■□□□□ 0.41
NRF1-205ENST00000393232 WRNQ14191 1432 aaPredicted RBP eCLIP17.61■□□□□ 0.41
NRF1-205ENST00000393232 TNIKQ9UKE5 1360 aa17.59■□□□□ 0.41
NRF1-205ENST00000393232 BIVM-ERCC5R4GMW8 1640 aa17.59■□□□□ 0.41
NRF1-205ENST00000393232 TOP2BQ02880 1626 aa17.57■□□□□ 0.4
NRF1-205ENST00000393232 CUX1P39880 1505 aa17.56■□□□□ 0.4
NRF1-205ENST00000393232 PDS5BQ9NTI5 1447 aa17.55■□□□□ 0.4
NRF1-205ENST00000393232 CEP164Q9UPV0 1460 aa17.53■□□□□ 0.4
NRF1-205ENST00000393232 EEA1Q15075 1411 aa17.51■□□□□ 0.39
NRF1-205ENST00000393232 RANGAP1P46060 587 aaPredicted RBP17.51■□□□□ 0.39
NRF1-205ENST00000393232 GOLGA3Q08378 1498 aa17.47■□□□□ 0.39
NRF1-205ENST00000393232 DNMBPQ6XZF7 1577 aa17.47■□□□□ 0.39
NRF1-205ENST00000393232 URB2Q14146 1524 aaKnown RBP17.46■□□□□ 0.39
NRF1-205ENST00000393232 TOPBP1Q92547 1522 aa17.44■□□□□ 0.38
NRF1-205ENST00000393232 MRC2Q9UBG0 1479 aa17.39■□□□□ 0.37
NRF1-205ENST00000393232 SCAF1Q9H7N4 1312 aaKnown RBP17.39■□□□□ 0.37
NRF1-205ENST00000393232 THOC2Q8NI27 1593 aaKnown RBP17.39■□□□□ 0.37
NRF1-205ENST00000393232 HNRNPUL2Q1KMD3 747 aaKnown RBP17.38■□□□□ 0.37
NRF1-205ENST00000393232 FGD5Q6ZNL6 1462 aa17.37■□□□□ 0.37
NRF1-205ENST00000393232 ERCC6Q03468 1493 aa17.36■□□□□ 0.37
NRF1-205ENST00000393232 WDR62O43379 1518 aa17.36■□□□□ 0.37
NRF1-205ENST00000393232 CLIP1P30622 1438 aa17.34■□□□□ 0.37
NRF1-205ENST00000393232 POLA1P09884 1462 aaPredicted RBP17.33■□□□□ 0.37
NRF1-205ENST00000393232 DIEXFQ68CQ4 756 aaKnown RBP17.32■□□□□ 0.36
NRF1-205ENST00000393232 RAPGEF2Q9Y4G8 1499 aa17.32■□□□□ 0.36
NRF1-205ENST00000393232 WDR97A6NE52 1622 aa17.29■□□□□ 0.36
NRF1-205ENST00000393232 KIF21BO75037 1637 aa17.27■□□□□ 0.35
NRF1-205ENST00000393232 APLP2Q06481 763 aa17.26■□□□□ 0.35
NRF1-205ENST00000393232 RAD54L2Q9Y4B4 1467 aa17.25■□□□□ 0.35
NRF1-205ENST00000393232 TARBP1Q13395 1621 aaKnown RBP17.25■□□□□ 0.35
NRF1-205ENST00000393232 ABCA10Q8WWZ4 1543 aa17.23■□□□□ 0.35
NRF1-205ENST00000393232 CUX2O14529 1486 aa17.23■□□□□ 0.35
NRF1-205ENST00000393232 VPS8Q8N3P4 1428 aa17.22■□□□□ 0.35
NRF1-205ENST00000393232 NEUROD1Q13562 356 aa17.21■□□□□ 0.35
NRF1-205ENST00000393232 KIF27Q86VH2 1401 aa17.17■□□□□ 0.34
NRF1-205ENST00000393232 ABCA5Q8WWZ7 1642 aa17.16■□□□□ 0.34
NRF1-205ENST00000393232 ACIN1Q9UKV3 1341 aaKnown RBP17.16■□□□□ 0.34
NRF1-205ENST00000393232 ZNF316A6NFI3 1004 aaPredicted RBP17.15■□□□□ 0.34
NRF1-205ENST00000393232 IFT140Q96RY7 1462 aa17.13■□□□□ 0.33
NRF1-205ENST00000393232 KANK4Q5T7N3 995 aaPredicted RBP17.08■□□□□ 0.32
NRF1-205ENST00000393232 PBRM1Q86U86 1689 aa17.07■□□□□ 0.32
NRF1-205ENST00000393232 ZNF608Q9ULD9 1512 aaPredicted RBP17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms